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Os03t0236200-01
Locus
Os03g0236200
Description
Similar to Glutamate decarboxylase isozyme 3 (EC 4.1.1.15).
Transcript Evidence
AK071556 (DDBJ, Best hit)
Protein Evidence
Q1I1D8 (UniProt)
CGSNL Gene Symbol
CGSNL Gene Name
CGSNL Gene Symbol Synonym(s)
CGSNL Gene Name Synonym(s)
Literature (PMID)
Manual Curation
Note
GO
Biological Process: glutamate metabolic process (GO:0006536)
Biological Process: carboxylic acid metabolic process (GO:0019752)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: glutamate decarboxylase activity (GO:0004351)
Molecular Function: carboxy-lyase activity (GO:0016831)
Molecular Function: pyridoxal phosphate binding (GO:0030170)
InterPro
Pyridoxal phosphate-dependent decarboxylase (IPR002129)
Glutamate decarboxylase (IPR010107)
Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (IPR015421)
Pyridoxal phosphate-dependent transferase, major domain (IPR015424)
KEGG
KOME
J023101A16 (Online Clone Ordering)
RiceXPro Database
Plant Gene Family Database (PGFD)
Integrative Database of Cereal Gene Phylogeny (IDCGP)
Transcript |
2017 bp |
>Os03t0236200-01 Similar to Glutamate decarboxylase isozyme 3 (EC 4.1.1.15). ACACCAAAACAACTCGCATCCGTTTCGTTCAAGTCCCCCCCCGAAAAGAGCTTAGTAGAA GCGCGCCACAGAGCCTTCTCGACCTGGCTCTCCTCTAGCCACCTCTGCTTCTTCTTCTTC TTCTTCTTCTTCTTCGTCTGATCGCCACCGAGGCTAAAGCCACCAGGAGGAGCAGGTTGA TAGCTCGGCAGGCAAGATGGTGCTCTCCAAGGCCGTCTCCGAGAGTGACATGTCCGTGCA CTCCACCTTCGCCTCCCGCTACGTCCGCGCCTCCCTCCCAAGGTACCGGATGCCGGAGAA CTCGATCCCGAAGGAGGCGGCGTACCAGATCATCAACGACGAGCTGATGCTGGACGGCAA CCCGCGGCTGAACCTGGCGTCGTTCGTCACCACGTGGATGGAGCCCGAGTGCGACAAGCT CATCATGGCCGCCATCAACAAGAACTACGTCGACATGGACGAGTACCCCGTCACCACCGA GCTCCAGAACCGGTGCGTGAACATGATCGCGCACCTGTTCCACGCGCCGCTCGGGGAGGA CGAGACGGCGGTGGGCGTGGGCACGGTGGGTTCGTCGGAGGCCATCATGCTGGCCGGGCT GGCCTTCAAGCGGCGGTGGCAGAACAAGCGCAAGGCCGAGGGGAAGCCGTTCGACAAGCC CAACATCATCACCGGCGCCAACGTGCAGGTGTGCTGGGAGAAGTTCGCCCGCTACTTCGA GGTGGAGCTCAAGGAGGTGAAGCTCCGCGACGGCTACTACGTCATGGACCCCGAGAAGGC CGTCGACATGGTCAACGAGAACACCATCTGCGTCGCCGCCATCCTCGGCTCCACCCTCAA CGGCGAGTTCGAGGACGTCAAGCTACTCAACGACCTCCTCGACAAGAAGAACAAGGAGAC TGGGTGGGAGACGCCGATCCACGTGGACGCGGCGAGCGGCGGGTTCATCGCGCCGTTCCT GTACCCGGAGCTGGAGTGGGACTTCCGGCTGCCGTGGGTGAAGAGCATCAACGTGAGCGG TCACAAGTACGGGCTCGTCTACGCCGGCATCGGCTGGTGCATCTGGCGCAACAAGGAGGA CCTGCCCGAGGAGCTCATCTTCCACATCAACTACCTCGGCACCGACCAGCCAACCTTCAC CCTCAACTTCTCCAAGGGCTCCAGCCAGGTCATCGCCCAGTACTACCAGCTCATCCGCCA CGGCTTCGAGGGGTACAGGAACATCATGGAGAACTGCCACGAGAACGCGATGGTGCTGAA GGAAGGGCTGGTGAAGACGGGGAGGTTCGACATCGTGTCCAAGGACGAAGGGGTGCCGCT GGTGGCGTTCTCGCTCAAGGACCGGAGCCGGCACGACGAGTTCGAGATCTCCGACATGCT GCGCCGCTTCGGCTGGATCGTGCCGGCGTACACCATGCCGCCCGACGCCCAGCACGTCAC GGTGCTCCGCGTGGTCATCCGGGAGGAGTTCAGCCGCACCCTCGCCGAGCGCCTCGTCCT CGACATCGAGAAGGTGATGTACCAGCTCGACGCGCTCCCCTCCAGGCTCATGCCCCCCGT GCCGCCGGCGCCGCTGCTGGTGGTCGCCAAGAAGTCGGAGCTCGAGACGCAGCGGTCGGT GACGGAGGCGTGGAAGAAGTTCGTGCTCGCCAAGAGGACCAACGGCGTCTGCTAGTCTCA ATTAGCGACAGCGCCACGGCCTACAAATCCACAAATCAAGACGCTGCTGATTGATATGAT TAATTACATTCATGGTGTGAGCTACCATTACTGTATTTTTTTTTTACCGTGCTAATTTGA GTGGAGCCTTCGATTCTAGGTCCAAGGTACTAGTAGAGTTCATAACCAAAAGCCATGCTC TTGCTTTTGTTTCTCCTTCTGATAATCTGTGCAGCTGCGCTGCAGCCTGCACTCATCTCC CGAGAGTTGTAAGTTGAAACTGTACGATTTTGATGTTCCCTGTTCTAGTGTAAGTGCCAA TTATTGAGTGGTATGGAAAATATTTCTTCAAGAAACC
CDS |
1479 bp |
>Os03t0236200-01 Similar to Glutamate decarboxylase isozyme 3 (EC 4.1.1.15). ATGGTGCTCTCCAAGGCCGTCTCCGAGAGTGACATGTCCGTGCACTCCACCTTCGCCTCC CGCTACGTCCGCGCCTCCCTCCCAAGGTACCGGATGCCGGAGAACTCGATCCCGAAGGAG GCGGCGTACCAGATCATCAACGACGAGCTGATGCTGGACGGCAACCCGCGGCTGAACCTG GCGTCGTTCGTCACCACGTGGATGGAGCCCGAGTGCGACAAGCTCATCATGGCCGCCATC AACAAGAACTACGTCGACATGGACGAGTACCCCGTCACCACCGAGCTCCAGAACCGGTGC GTGAACATGATCGCGCACCTGTTCCACGCGCCGCTCGGGGAGGACGAGACGGCGGTGGGC GTGGGCACGGTGGGTTCGTCGGAGGCCATCATGCTGGCCGGGCTGGCCTTCAAGCGGCGG TGGCAGAACAAGCGCAAGGCCGAGGGGAAGCCGTTCGACAAGCCCAACATCATCACCGGC GCCAACGTGCAGGTGTGCTGGGAGAAGTTCGCCCGCTACTTCGAGGTGGAGCTCAAGGAG GTGAAGCTCCGCGACGGCTACTACGTCATGGACCCCGAGAAGGCCGTCGACATGGTCAAC GAGAACACCATCTGCGTCGCCGCCATCCTCGGCTCCACCCTCAACGGCGAGTTCGAGGAC GTCAAGCTACTCAACGACCTCCTCGACAAGAAGAACAAGGAGACTGGGTGGGAGACGCCG ATCCACGTGGACGCGGCGAGCGGCGGGTTCATCGCGCCGTTCCTGTACCCGGAGCTGGAG TGGGACTTCCGGCTGCCGTGGGTGAAGAGCATCAACGTGAGCGGTCACAAGTACGGGCTC GTCTACGCCGGCATCGGCTGGTGCATCTGGCGCAACAAGGAGGACCTGCCCGAGGAGCTC ATCTTCCACATCAACTACCTCGGCACCGACCAGCCAACCTTCACCCTCAACTTCTCCAAG GGCTCCAGCCAGGTCATCGCCCAGTACTACCAGCTCATCCGCCACGGCTTCGAGGGGTAC AGGAACATCATGGAGAACTGCCACGAGAACGCGATGGTGCTGAAGGAAGGGCTGGTGAAG ACGGGGAGGTTCGACATCGTGTCCAAGGACGAAGGGGTGCCGCTGGTGGCGTTCTCGCTC AAGGACCGGAGCCGGCACGACGAGTTCGAGATCTCCGACATGCTGCGCCGCTTCGGCTGG ATCGTGCCGGCGTACACCATGCCGCCCGACGCCCAGCACGTCACGGTGCTCCGCGTGGTC ATCCGGGAGGAGTTCAGCCGCACCCTCGCCGAGCGCCTCGTCCTCGACATCGAGAAGGTG ATGTACCAGCTCGACGCGCTCCCCTCCAGGCTCATGCCCCCCGTGCCGCCGGCGCCGCTG CTGGTGGTCGCCAAGAAGTCGGAGCTCGAGACGCAGCGGTCGGTGACGGAGGCGTGGAAG AAGTTCGTGCTCGCCAAGAGGACCAACGGCGTCTGCTAG
Protein |
493 aa |
>Os03t0236200-01 Similar to Glutamate decarboxylase isozyme 3 (EC 4.1.1.15). MVLSKAVSESDMSVHSTFASRYVRASLPRYRMPENSIPKEAAYQIINDELMLDGNPRLNL ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFHAPLGEDETAVG VGTVGSSEAIMLAGLAFKRRWQNKRKAEGKPFDKPNIITGANVQVCWEKFARYFEVELKE VKLRDGYYVMDPEKAVDMVNENTICVAAILGSTLNGEFEDVKLLNDLLDKKNKETGWETP IHVDAASGGFIAPFLYPELEWDFRLPWVKSINVSGHKYGLVYAGIGWCIWRNKEDLPEEL IFHINYLGTDQPTFTLNFSKGSSQVIAQYYQLIRHGFEGYRNIMENCHENAMVLKEGLVK TGRFDIVSKDEGVPLVAFSLKDRSRHDEFEISDMLRRFGWIVPAYTMPPDAQHVTVLRVV IREEFSRTLAERLVLDIEKVMYQLDALPSRLMPPVPPAPLLVVAKKSELETQRSVTEAWK KFVLAKRTNGVC*
5'UTR
chr03:7181080..7181275 (+ strand) : 196 bp
CDS
chr03:7181276..7181361 (+ strand) : 86 bp
chr03:7181474..7181678 (+ strand) : 205 bp
chr03:7182331..7182746 (+ strand) : 416 bp
chr03:7182833..7183139 (+ strand) : 307 bp
chr03:7183230..7183694 (+ strand) : 465 bp
3'UTR
chr03:7183695..7184036 (+ strand) : 342 bp
FASTA
>Os03t0236200-01 class=Sequence position=chr03:7181080..7184036 (+ strand) ACACCAAAAC AACTCGCATC CGTTTCGTTC AAGTCCCCCC CCGAAAAGAG CTTAGTAGAA GCGCGCCACA GAGCCTTCTC GACCTGGCTC TCCTCTAGCC ACCTCTGCTT CTTCTTCTTC TTCTTCTTCT TCTTCGTCTG ATCGCCACCG AGGCTAAAGC CACCAGGAGG AGCAGGTTGA TAGCTCGGCA GGCAAGATGG TGCTCTCCAA GGCCGTCTCC GAGAGTGACA TGTCCGTGCA CTCCACCTTC GCCTCCCGCT ACGTCCGCGC CTCCCTCCCA AGGTACGTGC TCTCGATCTG CTCTCTCTCT GTTCTTGCTG TTCTTGGCCC AATGCAGAGC TTCTTCCAAT ATTTCATGGC TGACTCGATG GGATTGATCG ATTGGTGTTA TTAGGTACCG GATGCCGGAG AACTCGATCC CGAAGGAGGC GGCGTACCAG ATCATCAACG ACGAGCTGAT GCTGGACGGC AACCCGCGGC TGAACCTGGC GTCGTTCGTC ACCACGTGGA TGGAGCCCGA GTGCGACAAG CTCATCATGG CCGCCATCAA CAAGAACTAC GTCGACATGG ACGAGTACCC CGTCACCACC GAGCTCCAGG TACAGCACCC TGCAGGCATC TCTGCTTCGT TGAATTTTCT CCTATCACCT CGCGTTTTCT CGCCGCCGCG CGCGGCTCGA ATGCACACTG GAAATCCCCG GATTTTTGGT CGATAAAACC GGCTTGGCCA GTTGGCCTGG CCTGGCAGAT TGGTGATAAG AATCTCAGGC TAGAAACTTT ATTTCCGAGT TTATCATTTG CGTCATTCAC GGGAGGCAGA ATGGGGGAAG AACATGGCAC AGTTTCCGAG ATGATCACCA ATTCGCATTA GAAAAAATAT ATAGGAAGTC CAATAAATAA AGTAAGGGGA TGGGAAGAAT GATCACCATA TCTCTTCATT TTTCGCATTA AAATATGGAA GGTGCATGAA TGAAGGGAAA TGGGAAAGAA TAATGCTTGG TTTGGTCAAA ACAGGGCAAG AGACCAAAGT TCCATCTACT GAAACGGCGT GGACAACAGT CAAAACCTGG AACACAGAAA ACACCACTGC AACTTTCCCC TTTTTGTGAA TGAGACACAT TATTAGTCCT TTTTTCAGCC AGACATGCTT TGGGCCAGAT GATGTCCTAG CATGAAATGT ACAACATTTT TTTTGGGCCG GGCCGTTCTA CAGCTAATTA ACGAACGCTT TGGATGTGTG ACGCTGTGCA GAACCGGTGC GTGAACATGA TCGCGCACCT GTTCCACGCG CCGCTCGGGG AGGACGAGAC GGCGGTGGGC GTGGGCACGG TGGGTTCGTC GGAGGCCATC ATGCTGGCCG GGCTGGCCTT CAAGCGGCGG TGGCAGAACA AGCGCAAGGC CGAGGGGAAG CCGTTCGACA AGCCCAACAT CATCACCGGC GCCAACGTGC AGGTGTGCTG GGAGAAGTTC GCCCGCTACT TCGAGGTGGA GCTCAAGGAG GTGAAGCTCC GCGACGGCTA CTACGTCATG GACCCCGAGA AGGCCGTCGA CATGGTCAAC GAGAACACCA TCTGCGTCGC CGCCATCCTC GGCTCCACCC TCAACGGCGA GTTCGAGGAC GTCAAGCTAC TCAACGACCT CCTCGACAAG AAGAACAAGG AGACTGGGTA ACTAAAATTA CTATTTCTAC TACACTAAAT TATCTATCTA TGAAAGTGAG ATTAATCGAT GTCATTGCGG CCGTGGTGTG CAGGTGGGAG ACGCCGATCC ACGTGGACGC GGCGAGCGGC GGGTTCATCG CGCCGTTCCT GTACCCGGAG CTGGAGTGGG ACTTCCGGCT GCCGTGGGTG AAGAGCATCA ACGTGAGCGG TCACAAGTAC GGGCTCGTCT ACGCCGGCAT CGGCTGGTGC ATCTGGCGCA ACAAGGAGGA CCTGCCCGAG GAGCTCATCT TCCACATCAA CTACCTCGGC ACCGACCAGC CAACCTTCAC CCTCAACTTC TCCAAGGGCT CCAGCCAGGT CATCGCCCAG TACTACCAGC TCATCCGCCA CGGCTTCGAG GTATAATCAA TGGAACACAA TTAACTCTCT TGATCAGATG AATTTTTTTT AGCTGATCTG ACACACCCAT CGATCCGATG TTATTTGCAG GGGTACAGGA ACATCATGGA GAACTGCCAC GAGAACGCGA TGGTGCTGAA GGAAGGGCTG GTGAAGACGG GGAGGTTCGA CATCGTGTCC AAGGACGAAG GGGTGCCGCT GGTGGCGTTC TCGCTCAAGG ACCGGAGCCG GCACGACGAG TTCGAGATCT CCGACATGCT GCGCCGCTTC GGCTGGATCG TGCCGGCGTA CACCATGCCG CCCGACGCCC AGCACGTCAC GGTGCTCCGC GTGGTCATCC GGGAGGAGTT CAGCCGCACC CTCGCCGAGC GCCTCGTCCT CGACATCGAG AAGGTGATGT ACCAGCTCGA CGCGCTCCCC TCCAGGCTCA TGCCCCCCGT GCCGCCGGCG CCGCTGCTGG TGGTCGCCAA GAAGTCGGAG CTCGAGACGC AGCGGTCGGT GACGGAGGCG TGGAAGAAGT TCGTGCTCGC CAAGAGGACC AACGGCGTCT GCTAGTCTCA ATTAGCGACA GCGCCACGGC CTACAAATCC ACAAATCAAG ACGCTGCTGA TTGATATGAT TAATTACATT CATGGTGTGA GCTACCATTA CTGTATTTTT TTTTTACCGT GCTAATTTGA GTGGAGCCTT CGATTCTAGG TCCAAGGTAC TAGTAGAGTT CATAACCAAA AGCCATGCTC TTGCTTTTGT TTCTCCTTCT GATAATCTGT GCAGCTGCGC TGCAGCCTGC ACTCATCTCC CGAGAGTTGT AAGTTGAAAC TGTACGATTT TGATGTTCCC TGTTCTAGTG TAAGTGCCAA TTATTGAGTG GTATGGAAAA TATTTCTTCA AGAAACC