Locus

Os12g0207600

Description

Similar to ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit.

Transcript Evidence

ab initio prediction

Protein Evidence

YP_654221.1 (RefSeq)

CGSNL Gene Symbol

CGSNL Gene Name

CGSNL Gene Symbol Synonym(s)

CGSNL Gene Name Synonym(s)

Literature (PMID)

Manual Curation

Note

GO

Biological Process: carbon fixation (GO:0015977)

Cellular Component: plastid (GO:0009536)

Molecular Function: magnesium ion binding (GO:0000287)

Molecular Function: ribulose-bisphosphate carboxylase activity (GO:0016984)

InterPro

Ribulose bisphosphate carboxylase, large subunit, C-terminal (IPR000685)

Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal (IPR017443)

Ribulose bisphosphate carboxylase, large subunit, N-terminal (IPR017444)

Ribulose bisphosphate carboxylase, large chain, active site (IPR020878)

Ribulose bisphosphate carboxylase, large subunit (IPR020888)

Transcript

1434 bp

>Os12t0207600-00 Similar to ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit.
ATGTCACCACAAACAGAAACTAAAGCAAATGTTGGATTTAAAGCTGGTGTTAAGGATTAT
AAATTGACTTACTACACCCCGGAGTACGAAACCAAGGACACTGATATCTTGGCAGCATTC
CGAGTAACTCCTCAGCCGGGGGTTCCGCCCGAAGAAGCAGGGGCTGCAGTAGCTGCCGAA
TCTTCTACTGGTACATGGACAACTGTTTGGACTGATGGACTTACCAGTCTTGATCGTTAC
AAAGGCCGATGCTATCACATCGAGCCCGTTGTTGGGGAGGATAATCAATATATCGCTTAT
GTAGCTTATCCATTAGACCTATTTGAAGAGGGTTTTGTTACTAACATGTTTACTTCCATT
GTGGGTAACATATTTGGTTTCAAAGCCCTACGTGCTCTACGTCTGGAGGATCTGCGAATT
CCCCCTACTTATTCAAAAACTTTCCAAGGTCCGCCTCATGGTATCCAAGTTGAAAGGGAT
AAGTTGAACAAATACGATCGTCCTTTATTGGGATGTACTATTAAACCAAAATTGGGATTA
TCTGCAAAAAATTATGGTAGAGCATGTTATGAGTGTCTACGCGGTGGACTTGATTTTACC
AAAGATGATGAAAACGTAAACTCACAACCATTTATGCGTTGGAGGGACCGTTTTGTCTTT
TGTGCCGAAGCTATTTATAAATCACAGGCCGAAACCGGTGAAATTAAGGGGCATTACTTG
AATGCGACTGCAGGTACATGCGAAGAAATGATTAAAAGAGCTGTATTTGCGAGGGAATTA
GGGGTTCCTATTGTAATGCATGACTACTTAACCAGGGGATTCACCGCAAATACTAGTTTG
GCTCATTATTGCCGCGACAACGGCCTACTTCTTCACATTCACCGAGCAATGCATGCAGTT
ATTGATAGACAGAAAAATCATGGTATGCATTTCCGTGTATTAGCTAAAGCATTGCGTATG
TCTGGGGGAGATCATATCCACGCTGGTACAGTAGTAGGTAAGTTAGAAGGGGAACGCGAA
ATGACTTTAGGTTTTGTTGATTTATTGCGCGATGATTTTATTGAAAAAGATCGTGCTCGC
GGTATCTTTTTCACTCAGGACTGGGTATCCATGCCAGGTGTTATACCGGTGGCTTCAGGG
GGTATTCATGTTTGGCATATGCCAGCTCTGACCGAAATCTTTGGAGATGATTCTGTATTG
CAATTTGGTGGAGGAACTTTAGGACATCCTTGGGGTAATGCACCTGGTGCAGCAGCTAAT
CGGGTGGCTTTAGAAGCCTGTGTACAAGCTCGTAATGAAGGGCGCGATCTTGCTCGTGAA
GGTAATGAAATTATCCGATCAGCTTGCAAATGGAGTCCTGAACTAGCCGCAGCTTGTGAA
ATATGGAAAGTGATCAAATTCGAGTTCGAGCCGGTAGATAAACTAGATAGCTAG

CDS

1434 bp

>Os12t0207600-00 Similar to ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit.
ATGTCACCACAAACAGAAACTAAAGCAAATGTTGGATTTAAAGCTGGTGTTAAGGATTAT
AAATTGACTTACTACACCCCGGAGTACGAAACCAAGGACACTGATATCTTGGCAGCATTC
CGAGTAACTCCTCAGCCGGGGGTTCCGCCCGAAGAAGCAGGGGCTGCAGTAGCTGCCGAA
TCTTCTACTGGTACATGGACAACTGTTTGGACTGATGGACTTACCAGTCTTGATCGTTAC
AAAGGCCGATGCTATCACATCGAGCCCGTTGTTGGGGAGGATAATCAATATATCGCTTAT
GTAGCTTATCCATTAGACCTATTTGAAGAGGGTTTTGTTACTAACATGTTTACTTCCATT
GTGGGTAACATATTTGGTTTCAAAGCCCTACGTGCTCTACGTCTGGAGGATCTGCGAATT
CCCCCTACTTATTCAAAAACTTTCCAAGGTCCGCCTCATGGTATCCAAGTTGAAAGGGAT
AAGTTGAACAAATACGATCGTCCTTTATTGGGATGTACTATTAAACCAAAATTGGGATTA
TCTGCAAAAAATTATGGTAGAGCATGTTATGAGTGTCTACGCGGTGGACTTGATTTTACC
AAAGATGATGAAAACGTAAACTCACAACCATTTATGCGTTGGAGGGACCGTTTTGTCTTT
TGTGCCGAAGCTATTTATAAATCACAGGCCGAAACCGGTGAAATTAAGGGGCATTACTTG
AATGCGACTGCAGGTACATGCGAAGAAATGATTAAAAGAGCTGTATTTGCGAGGGAATTA
GGGGTTCCTATTGTAATGCATGACTACTTAACCAGGGGATTCACCGCAAATACTAGTTTG
GCTCATTATTGCCGCGACAACGGCCTACTTCTTCACATTCACCGAGCAATGCATGCAGTT
ATTGATAGACAGAAAAATCATGGTATGCATTTCCGTGTATTAGCTAAAGCATTGCGTATG
TCTGGGGGAGATCATATCCACGCTGGTACAGTAGTAGGTAAGTTAGAAGGGGAACGCGAA
ATGACTTTAGGTTTTGTTGATTTATTGCGCGATGATTTTATTGAAAAAGATCGTGCTCGC
GGTATCTTTTTCACTCAGGACTGGGTATCCATGCCAGGTGTTATACCGGTGGCTTCAGGG
GGTATTCATGTTTGGCATATGCCAGCTCTGACCGAAATCTTTGGAGATGATTCTGTATTG
CAATTTGGTGGAGGAACTTTAGGACATCCTTGGGGTAATGCACCTGGTGCAGCAGCTAAT
CGGGTGGCTTTAGAAGCCTGTGTACAAGCTCGTAATGAAGGGCGCGATCTTGCTCGTGAA
GGTAATGAAATTATCCGATCAGCTTGCAAATGGAGTCCTGAACTAGCCGCAGCTTGTGAA
ATATGGAAAGTGATCAAATTCGAGTTCGAGCCGGTAGATAAACTAGATAGCTAG

Protein

478 aa

>Os12t0207600-00 Similar to ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit.
MSPQTETKANVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
SSTGTWTTVWTDGLTSLDRYKGRCYHIEPVVGEDNQYIAYVAYPLDLFEEGFVTNMFTSI
VGNIFGFKALRALRLEDLRIPPTYSKTFQGPPHGIQVERDKLNKYDRPLLGCTIKPKLGL
SAKNYGRACYECLRGGLDFTKDDENVNSQPFMRWRDRFVFCAEAIYKSQAETGEIKGHYL
NATAGTCEEMIKRAVFARELGVPIVMHDYLTRGFTANTSLAHYCRDNGLLLHIHRAMHAV
IDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGEREMTLGFVDLLRDDFIEKDRAR
GIFFTQDWVSMPGVIPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAAAN
RVALEACVQARNEGRDLAREGNEIIRSACKWSPELAAACEIWKVIKFEFEPVDKLDS*

CDS

chr12:5614140..5615573 (+ strand) : 1434 bp

FASTA

>Os12t0207600-00 class=Sequence position=chr12:5614140..5615573 (+ strand)
ATGTCACCAC AAACAGAAAC TAAAGCAAAT GTTGGATTTA AAGCTGGTGT TAAGGATTAT AAATTGACTT ACTACACCCC
GGAGTACGAA ACCAAGGACA CTGATATCTT GGCAGCATTC CGAGTAACTC CTCAGCCGGG GGTTCCGCCC GAAGAAGCAG
GGGCTGCAGT AGCTGCCGAA TCTTCTACTG GTACATGGAC AACTGTTTGG ACTGATGGAC TTACCAGTCT TGATCGTTAC
AAAGGCCGAT GCTATCACAT CGAGCCCGTT GTTGGGGAGG ATAATCAATA TATCGCTTAT GTAGCTTATC CATTAGACCT
ATTTGAAGAG GGTTTTGTTA CTAACATGTT TACTTCCATT GTGGGTAACA TATTTGGTTT CAAAGCCCTA CGTGCTCTAC
GTCTGGAGGA TCTGCGAATT CCCCCTACTT ATTCAAAAAC TTTCCAAGGT CCGCCTCATG GTATCCAAGT TGAAAGGGAT
AAGTTGAACA AATACGATCG TCCTTTATTG GGATGTACTA TTAAACCAAA ATTGGGATTA TCTGCAAAAA ATTATGGTAG
AGCATGTTAT GAGTGTCTAC GCGGTGGACT TGATTTTACC AAAGATGATG AAAACGTAAA CTCACAACCA TTTATGCGTT
GGAGGGACCG TTTTGTCTTT TGTGCCGAAG CTATTTATAA ATCACAGGCC GAAACCGGTG AAATTAAGGG GCATTACTTG
AATGCGACTG CAGGTACATG CGAAGAAATG ATTAAAAGAG CTGTATTTGC GAGGGAATTA GGGGTTCCTA TTGTAATGCA
TGACTACTTA ACCAGGGGAT TCACCGCAAA TACTAGTTTG GCTCATTATT GCCGCGACAA CGGCCTACTT CTTCACATTC
ACCGAGCAAT GCATGCAGTT ATTGATAGAC AGAAAAATCA TGGTATGCAT TTCCGTGTAT TAGCTAAAGC ATTGCGTATG
TCTGGGGGAG ATCATATCCA CGCTGGTACA GTAGTAGGTA AGTTAGAAGG GGAACGCGAA ATGACTTTAG GTTTTGTTGA
TTTATTGCGC GATGATTTTA TTGAAAAAGA TCGTGCTCGC GGTATCTTTT TCACTCAGGA CTGGGTATCC ATGCCAGGTG
TTATACCGGT GGCTTCAGGG GGTATTCATG TTTGGCATAT GCCAGCTCTG ACCGAAATCT TTGGAGATGA TTCTGTATTG
CAATTTGGTG GAGGAACTTT AGGACATCCT TGGGGTAATG CACCTGGTGC AGCAGCTAAT CGGGTGGCTT TAGAAGCCTG
TGTACAAGCT CGTAATGAAG GGCGCGATCT TGCTCGTGAA GGTAATGAAA TTATCCGATC AGCTTGCAAA TGGAGTCCTG
AACTAGCCGC AGCTTGTGAA ATATGGAAAG TGATCAAATT CGAGTTCGAG CCGGTAGATA AACTAGATAG CTAG