Os02t0214900-01

Name: Os02t0214900-01
Type: mRNA
Description: Oryza sativa histone deacetylase3.; Reproductive development.; Seed morphology.; Class-I type histone deacetylase.
Source: build5_rep
Position: chr02:6453581..6459587 (- strand)
Length: 6007 bp
Alias: AF513384
Expression: Search RiceXPro database by AF513384
GO: Molecular Function: histone deacetylase activity (GO:0004407)
  Cellular Component: nucleus (GO:0005634)
  Biological Process: histone deacetylation (GO:0016575)
Gene_symbols: OsHDAC3
  HDA703
InterPro: Histone deacetylase (IPR003084)
  Histone deacetylase superfamily (IPR000286)
KEGG: Os02t0214900-01 (EC:3.5.1.98)
Link_to: 3110 (Oryzabase)
  Histone deacetylase (Plant Gene Family Database)
  Interactive Database of Cereal Gene Phylogeny (IDCGP)
Locus_id: Os02g0214900
Note: Oryza sativa histone deacetylase3.
  Reproductive development.
  Seed morphology.
  Class-I type histone deacetylase.
ORF_evidence: Q7Y0Y6 (UniProt)
References: 12581311, 19664599
Status: manual curation (Apr 30, 2010)
Transcript_evidence: AF513384 (DDBJ)
load_id: Os02t0214900-01
primary_id: 3555802
gbrowse_dbid: assembly:database
Parts:
Type: 3'UTR
Source: build5_rep
Position: chr02:6453581..6453594 (- strand)
Length: 14 bp
parent_id: Os02t0214900-01
primary_id: 3555811
Type: CDS
Source: build5_rep
Position: chr02:6453945..6454019 (- strand)
Length: 75 bp
parent_id: Os02t0214900-01
primary_id: 3555810
Type: CDS
Source: build5_rep
Position: chr02:6454202..6454279 (- strand)
Length: 78 bp
parent_id: Os02t0214900-01
primary_id: 3555809
Type: CDS
Source: build5_rep
Position: chr02:6455996..6456056 (- strand)
Length: 61 bp
parent_id: Os02t0214900-01
primary_id: 3555808
Type: CDS
Source: build5_rep
Position: chr02:6456139..6456230 (- strand)
Length: 92 bp
parent_id: Os02t0214900-01
primary_id: 3555807
Type: CDS
Source: build5_rep
Position: chr02:6456340..6456570 (- strand)
Length: 231 bp
parent_id: Os02t0214900-01
primary_id: 3555806
Type: CDS
Source: build5_rep
Position: chr02:6457410..6457850 (- strand)
Length: 441 bp
parent_id: Os02t0214900-01
primary_id: 3555805
Type: CDS
Source: build5_rep
Position: chr02:6458937..6459491 (- strand)
Length: 555 bp
parent_id: Os02t0214900-01
primary_id: 3555804
Type: 5'UTR
Source: build5_rep
Position: chr02:6459492..6459587 (- strand)
Length: 96 bp
parent_id: Os02t0214900-01
primary_id: 3555803
>Os02t0214900-01 class=Sequence position=chr02:6453581..6459587 (- strand)
CAGCAAGCAC CCGACCACAA CACACACGCG AGCTCCTCGA GAGAGGAAAA AAACCCAACC CCGAATTCGG CGGCGGCGGC
GGAGGCGGAG GCGGCGATGG ACCCCTCGTC GGCGGGCGCG GGCGGCAACT CGCTGGCGTC GGCGTCGTGC GGCGACGCGC
AGAAGCGGCG GGTGTGCTAC TTCTACGACC CGGAGGTGGG CAACTACTAC TACGGTCAGG GCCACCCGAT GAAGCCCCAC
CGGGTGAGGA TGACCCACGC GCTGCTCGCC CACTACGGCC TCCTCGCCCC GGCCAAGATG GAGGTGCTCC GCCCGCTCCC
CGCCCGCGGC ATCGACCTCT GCCGCTTCCA CTCCGACGAC TACGTCGCCT TCCTCCGCGC CGTCACCCCG GAGACCCAGC
TCGGCCAGGT CCGCGCCCTC CGCCGCTTCA ACATCGGCCC GGACTGCCCC GTCTTCGACG GCCTCTACGC CTACTGCCAG
ACCTACGCGG GGGCCTCCGT CGGCGCCGCC GTCAAGCTCA ACCACGGCAC CCACGACATC GCCATCAACT GGTCCGGCGG
GTTGCACCAC GCCAAGAAGT CCGAGGCCTC CGGCTTCTGC TACGTCAACG ACATCGTCCT CGCCATCCTC GAGCTCCTCA
AGCTCCATGA GGTGACGTCA TCCTATTCCG CTCGTACCTG TGTTCCTTTT TTTTTTCAAT TTTTTTCTGC TTTTCTTGTT
TTTTTTTGGT TCGTTTAATG TTTCGAATAG ATTAGGAGTA GTACTATTTG GATGGGTGGT TTGTTTAATT TTTCGAATAG
ATAGATTACT TGATGTGTAA GTTGGGTGGG TCAATGAAGA CGGAAGCAAA AATCATCTTG ACTTCTTTCT CTCCAGTTGC
TCTGATTTTG TTGTGTACAG TTCGATCGAT CTTCCGCTAA ATTTTGGATC GGTAGGAAAT ATTAATCATC TGTAAATGTA
AATGAAATGG CTATCTGTAG ACAGAAATTG GATTAACTTT TTGCTCAACT TAAATCTCAT ACTATACTAT TCGTTACGCG
ATTACACATT GTCTGAATAG TATGGCATAT TGGCACGTGC AGAATTATGT ATTAACAATT TTATTCAGAT TTTTGTTTTC
CTGGATAAAA GCTCATGTAC GTTGATGAAT CATTCTGAAT GTGTATATGT ATTTCTAGTT GATATAATGA TGTTCCAAAG
AGAGAGAATG ATATGACGAC GAACTTGCTG TGTTTGTTAT TAAATTTGCC CATGATGTAT ACTGTTAAAG CTATATActc
cctccgatat aaggaatttt gagtttttgt ttgcaatgtt tgaccactcg tcttattcaa attttttttt ttgcaaatat
aaaaaacgaa aagttgtact taagataata aagtaagtca caaataaaat aaataataat ttcaaaaatt tttgaataag
gcgagtggtc aaacgttgca agaaaaatct caaaatcgct tacattatgg gacggaggga gTACAACATA CAGAATTTTC
ATTGGACGAT TCATGATAAG AGATTGATTT GATTGAAACG TATTCAGAAC AAGAGGTGAC TGATTACACA GATCTGAAGA
ATGGATGTTG CGTAAAGACA ATCCTAGATT ATCATGAACA GTTGAAAGTT TGAAAACAGA TCAGATGTTT TTTTCCCCTA
TTTGGTCTAG TTGTCTTCTT GTGCTAAACC ACTAATATGC TGTCTTCATA TTTACAGCGA GTTCTGTATA TTGATATTGA
TATCCATCAT GGAGATGGAG TTGAGGAGGC ATTCTACACA ACAAACAGGG TTATGACAGT CTCATTTCAC AAGTTTGGGG
ATTATTTCCC GGGAACAGGG GATATCCGCG ACATTGGGTA TTCAGAAGGG AAGTATTACT GCCTGAATGT CCCGCTGGAT
GATGGAATTG ATGATGACAG CTACCAGTCC ATCTTCAAGC CGATCATCAG CAAAGTCATG GAGATGTATC GTCCTGGTGC
AGTCGTGCTT CAGTGCGGCG CTGATTCGTT GTCCGGTGAT AGGTTGGGCT GTTTCAATCT CTCAGGGAAA GGTCATGCTG
AATGTGTTAA GTTCATGAGG TCTTTCAATG TTCCGTTGCT TCTTCTTGGT GGTGGTGGAT ATACCATAAG AAATGTTGCA
CGCTGCTGGT GTTACGAGGT ATGTAATCTG ATCAGAAGAC AAAACTGATA TATATCTTTC CCCCCGCTTT TTTTTTCCTT
TGTGCCTTTA ACATACAATT AATTCTATTG TTTATGGATG ATAAAGCAAA GCCATGAGCT CGGTAATGTG TTAGAACCTA
ATTTGCTTTG TGTTTCAACT GTGTTCGATG CTCAGCATCA AGAACTTGTC TTCTATAGTG GTCTGTACCT TCTACCTGGC
TTTGTTTATT GATCCATGCT GCTGTAATTT TACAATCACG AAACTAAGAT TTTGGTTTCT GCTGAGCAGA TGACTGAAAT
GCACAGAACA CCTATCGCCC ATTTACATGT AATGCTTAAT CTATTTATTT TCTACTCTGT TTCATTCAAA TGCATTAATT
TGTGAGAACT TGTGCAGTAA CAAATCATCC TGTGTTTCTC AAAGCATTAA AGGGTGGTTA TTTTAAAACA GATATAGTAT
CAGGCAAGGC ACAATAGAGC TTTCATAGAC AAGCTTAACA TTATTACTTC CGATGAATCC CGGAAAACGC TACTAGCTAA
CTGTTAACCC TTGCAAAATT ATATGCTTCA GGCCACCACC TGTTCCTCAG TTGTTAGCTT TCATCAAAGG TGTGTTTAAT
AAATTAGCAA CCCAAAATCT GGTGGCTCTT TGGACCTTGC AAGCCTGCTT TCGTTTCCTT TTGTGAATTT ATAAATCTGA
ACACACAGCA GGCTAAACAT GGCGAACAAG TGCGAATGGC AGTGCCTTAT GCTTGCTGGA GTCTTATATC AGGAACATCT
GTTGCTACAG CTATGGTTTT ATCCTCTGAT TGTTTATTTG GTTTTTTATT TGGCCAGACA GGAGTTGCAC TTGGTGAAGA
GCTACAGGAG AAGTTGCCTT ACAATGAGTA TTATGAATAT TTTGGTCCAG AATACAGTCT TTACGTTGCA GCAAGTAACA
TGGAGAACAG AAATACAAAC AAGCAACTGG AGGAAATAAA ATGCAATATT CTGGACAATC TTTCAAAACT TCAACATGCA
CCTAGCGTCC AATTTCAAGA GCGAATTCCT GAAACAAAGC TACCTGAGGT GAGTCTCCAG GCTTCCTAAT ATAAGCATGC
AAATGATGTC TTGGAAGTGA TAACTCAAGG GCTGACTGAA TGTATTTGTG TCCTGTGCAT ATGTGCTCAT TATTCAGCCA
GATGAAGATC AAGAGGATCC AGATGAAAGG CACGACCCTG ACTCTGATAT GGTGTTGGAT GATCACAAAC CTACGGGACA
CTCAGCAAGG TATCTATTTT TCCTTTTTTT AAAAGCTGTA TTAAATTTTG TATAATTATG TGCCCTGCCT CATGTTATAT
TTTCATTTTA GAAGCCTTAT TCACAACATC GGAGTAAAGA GAGAAATTAC TGAAACAGAG ACCAAAGATC AGGTACTTTC
TCCTCTCAGT TCATTCCAAT GAGCGGTTCT GTCCTGTCTC ATTTATAAAA TTCAAGACAC GACGTCCACC ATTTTAATTT
GAGATGTCTC CTTTTTAGCT GAGCCTGAAT CCTTAGAACT AGCTGAGCCT GAATCATTAG AACTAACAGT ATACTTACTC
CATTCTTTTA TTAACATGCG CCCTTTTGTT TAAAGAAGTG GCATTCCCCT TTTGTGCTTA TTTATGtact cccttcgttt
cgtattataa gtcgtttgat tttttttcta gtcaaaattt tttgagtttg tacaaattta tagaaaaatt atattagtat
tttcaataca aaacaaacat attatcaaaa tgtattcaat gttatattta atgaaactag tttggtattt tagatgttgc
caaattttct ataaatttgg tcaaacttaa ccaagtttga ctagaaaaag gtcaaacgac ttataatata aaagtatgaa
atTGATGGAG TAACAATGAG GTTTTCATTG TAGAGTTCTG TTCTTGCTGG CTTGCTGCTA TATGTGAATT ATAATCTTTA
TCCATATCGG TGCTAGAAAC ATAGCGAAAT TCTCTTGTGC TGTTGAGTTG TGGAGAAAGA CTGTGGTGCT GATGAAATTA
TTTTGCTTAC CATAGATGTA TTGACCTTTT CATCTGAATG AAATTTAAGG CAGCATTGGT TGTACCTTTT CCTTATCTCA
CAGGATTTTT TTTTGGTTGT GCATAGTCTC ATACAAATTA TTTAGAATCT ATACCTTGCA TTTATGCGAA ACGAGCCCTT
TGAAATTCTT TTTTTTTTTG AGGGGATAAT GGCAGGAGCT CTGCCTATTC ATTAAAGGAG AAAGAAGCAG TTTCACGTAC
ATGGACACCT CCAAGAGGTG TCTTCAGATT TTTACATTGG AGGAGGTTAC AGCACTTTGA GAAAGTGCAA AGCCACTAAC
AACAAAAGTA GGCGTTTTTT CATCTAAACG ATTTGCGCTT CATCGAAGGC TTTGCACATG TTGATGATGG AGTCAACCAC
ATGTAACACT GTACCATAGT CATTGTTAAA AATTCTAGCA TTTCTTTGTA GCCAAATCCC CCATGTCGTG TAGGCCATCA
AAATTCTTTC TCTGCTCTTT GATCATTTCT CTCCGGCAAG CTTCCCACCA ATCCATCATG TTTCCATTGA AGGAAGAAGA
CCTAGGCatg ttgagtccta gtttcaacca aatgtttgtc catacctgtt tcgcgaaggg gcaatccatg aagagatgtg
tcgctgtttc TGGTTCTGTC CCACAGAGGG AGCAAGTTGG ACTGTTGTCC CAACCTCGGA TTTGGAGTTT GTCAGACGTG
AGAACTTTCT TTTGGACCAT GAGCCATCCA AAGAACTTGC ATTTGTTTTC TGTTTTTGCT CGCCAAATGA AGTTAACACG
ATTGTCCTGA ATGCTTCCAG TGAATTGAAT TTTGTAGGCC GAGTTGGCTG AGTAGATTCC ATTCGCATTC CATTTCCACA
TTAGGTTGTC CTCCCTGTTT TCATCCAGTT GTACCTGTTG TATCAAGTGC CAGAGCAGGA TAAATTCTCG AACCTCGGTC
GTCGTGTTCA TCCTTCGGAG CCCTTTGAAA TTCTTGCAGC TTGGACTTTG TGGTATCTTT GTGTGATCTT TTGTTGAACT
AACACTTTCT GATTTACACA TTCTGCAGCA TGGTAAGAGA TTAACAACCG AACATAAAGG ACCAGAACCG ATGGCAGAGG
ATCTTGGTTC CTCCAAGCAA GCTCCTGTAA GTCGTCGTCT TCTCTTTTTT TTTTTTGCGG GGGAAGTCGT CGTCTTCTCT
ATCCATCTGC AAATCCATAG CAAAAGCTCT GCGTTGCCTA ATGCCTATAT GGATATCGAA TTATCTAACA CCATGGTTAA
TCTGCTCTAA CAAGTATTTT TCATCTTCAC ATTGCTTGTC GACGATAGAC TGCGGATGCA AATGCGGTGG CCGTCAACGC
GCCAGGCAAC GCCAGGAATG AACCGGGAAG CTCACCCAAA TGACCGAACC CACCAGCAGC TATGCACCAG AAGACCATGA
TTTAGCTACC TTCAGGACAC GAGCTCTCTG TCAAGGTTTC CTGCATGCTC TTAAGTTGGC AGAAACTGGA GTTGATCTGT
ATACTGCATC TTGACATTTC AAACTTAAAA ATCGACACAA ATCAAGAGCA AACACTGTTT GATTGTTTCT TCTGTAGGAG
TTTACCATTG TTTCTTTTGT TGAAGAAGTC CATAATGTTC AGGCAATACT GGACGTGGAG GCATTAGTCT GACTGACCAA
TGTAGTACAA AACAAAACAT GTAACGTGAA GCAAGTTAAA ATGTACAGTC TGTTAGACTG TTAGATGGAG ATATGGAATT
TCAGGCG