Os03t0177400-02

Name: Os03t0177400-02
Type: mRNA
Description: Similar to Elongation factor 1-alpha.
Source: build5_rep
Position: chr03:4094376..4096434 (+ strand)
Length: 2059 bp
Alias: AK062030
Expression: Search RiceXPro database by AK062030
GO: Molecular Function: translation elongation factor activity (GO:0003746)
  Molecular Function: GTP binding (GO:0005525)
  Cellular Component: cytoplasm (GO:0005737)
  Biological Process: translational elongation (GO:0006414)
  Molecular Function: GTPase activity (GO:0003924)
InterPro: Protein synthesis factor, GTP-binding (IPR000795)
  Translation elongation factor EFTu/EF1A, C-terminal (IPR004160)
  Translation elongation factor EFTu/EF1A, domain 2 (IPR004161)
  Translation elongation factor EF1A, eukaryotic and archaeal (IPR004539)
  Translation elongation and initiation factors/Ribosomal, beta-barrel (IPR009000)
  Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (IPR009001)
KEGG: Os03t0177400-02 (EC:3.6.5.3)
Link_to: Protein synthesis factor, GTP-binding (Plant Gene Family Database)
Locus_id: Os03g0177400
NIAS_FLcDNA: 001-043-G10 (Online Clone Ordering)
Note: Similar to Elongation factor 1-alpha.
ORF_evidence: Q10QZ4 (UniProt)
Transcript_evidence: AK062030 (DDBJ, Best hit)
load_id: Os03t0177400-02
primary_id: 3636779
gbrowse_dbid: assembly:database
Parts:
Type: 5'UTR
Source: build5_rep
Position: chr03:4094376..4094377 (+ strand)
Length: 2 bp
parent_id: Os03t0177400-02
primary_id: 3636780
Type: CDS
Source: build5_rep
Position: chr03:4094378..4094653 (+ strand)
Length: 276 bp
parent_id: Os03t0177400-02
primary_id: 3636781
Type: CDS
Source: build5_rep
Position: chr03:4095356..4096237 (+ strand)
Length: 882 bp
parent_id: Os03t0177400-02
primary_id: 3636782
Type: 3'UTR
Source: build5_rep
Position: chr03:4096238..4096434 (+ strand)
Length: 197 bp
parent_id: Os03t0177400-02
primary_id: 3636783
>Os03t0177400-02 class=Sequence position=chr03:4094376..4096434 (+ strand)
AGCTCAAGGC CGAGCGTGAG AGAGGTATCA CCATCGATAT CGCCCTGTGG AAGTTCGAGA CCACCAAGTA CTACTGCACG
GTCATCGATG CCCCTGGTCA CCGTGACTTC ATCAAGAACA TGATCACGGG TACCTCCCAG GCTGACTGTG CCGTGCTCAT
CATTGACTCC ACCACTGGTG GTTTTGAGGC TGGTATCTCC AAGGATGGCC AGACCCGTGA GCACGCTCTT CTTGCTTTCA
CTCTTGGAGT GAAGCAGATG ATCTGCTGCT GCAACAAGGT ATATATCTGT AGTGTTTGGT CTTTTGTTAT GATTGATGAG
CCTAGCACTT GTTTATACAT ATTTGTGATG CTATTGCAGA AACTTTTGGT TACATAAATG ATTTACTGCT ATATTCAGTT
GGAAATTGGA AATGAACATA TTCGTGATGC TATTCCAGAT ATTCTTGTTT TCTGTTATGA TTGATGAGCA ACTTCTGTGA
ATATTCATGA TGCTAGTCCT GAATACTGTT GATTACATCA ATGAAGTAGC ATTTTCTTTT ATTGATTTAT CCCTCTGTGC
TAGTTTTTCT GACTGTCTAC CTTCTATGCA TCTAAGACTG CAATTTACCA TGCATCTAAG GCTGCTACTG TTGATTGTTG
CTTTTGTTAT GACTGTCTGT CTTTATGATG CATCTAAGAT TGCAATTGTT GTTGGTTGCT TTCCTGCTAC TACTAGCTTT
AGTAATTTAC TGCTGCAAGA AACTATACAT ATCTTCTGTT AGATTTGGTT AAGTTCATTT AGATATCGTG CTGTATGTTA
CTTTATACTA GACTTGTATT GATGTTGCTG TCCACCTGTA TTTCATTACA TATTGGTTGC TATTATTTCA TTTTTTGTAT
CTTATATGGT GTTTATAATA TGTTTCATAC CATTTGTAGT TAGTAATGTA TTTGTATGCT GGTGCCTGCC CCTGATTTGT
TTTCCTTTGT TCTGTTACAG ATGGATGCCA CCACTCCCAA GTACTCCAAG GCCCGTTACG ATGAAATCGT GAAGGAAGTC
TCATCCTACC TGAAGAAGGT CGGCTACAAC CCTGACAAGA TTCCCTTCGT TCCCATCTCT GGGTTTGAGG GTGACAACAT
GATTGAGAGG TCCACCAACC TTGACTGGTA CAAGGGCCCC ACCTTGCTTG AGGCTCTTGA CCAGATCAAC GAGCCCAAGA
GGCCATCAGA CAAGCCCCTG CGTCTTCCCC TTCAGGACGT GTACAAGATC GGTGGTATTG GCACCGTGCC TGTGGGTCGT
GTTGAGACTG GAGTCCTCAA GCCTGGTATG GTGGTGACCT TTGGTCCCAG CGGCCTGACC ACTGAGGTCA AGTCGGTTGA
GATGCACCAC GAGGCTCTCC AGGAGGCTCT TCCTGGTGAC AACGTCGGGT TCAACGTGAA GAACGTTGCG GTGAAGGATC
TGAAGCGTGG GTACGTGGCC TCCAACTCCA AGGATGACCC TGCCAAGGAG GCTGCCAGCT TCACCTCCCA GGTGATCATC
ATGAACCACC CTGGCCAGAT CGGCAACGGC TACGCCCCAG TGCTGGACTG CCACACCTCC CACATTGCCG TCAAGTTTGC
TGAGCTGGTG ACCAAGATCG ACAGACGATC TGGTAAGGAG CTGGAGAAGG AGCCCAAGTT CCTCAAGAAC GGTGATGCTG
GTATGGTTAA GATGATTCCC ACCAAGCCCA TGGTTGTGGA GACCTTCTCT GAGTACCCTC CTCTTGGTCG TTTTGCCGTG
CGGGACATGA GGCAAACGGT GGCTGTTGGC GTCATCAAGA ACGTGGAGAA GAAGGACCCA ACCGGTGCCA AGGTGACCAA
GGCTGCCGCC AAGAAGAAAT GAGCCTCGTT CAAGTGGTGC TTTCCATATC TGCATTTGAG ATATCTAGCT CTTTTAGTAC
TCGTTAAGTT TTGTCGACGG TCATTTCAGT TGTTGCATTG ACCGTTAATA TCTGCTCGCT TTGTGCACTA TGTCAGTCAT
TTAAAACTCT ATTTTCTGTT CGGTTTAAAC TTGGATGTTA AGACTTATTA TTGCCCTTC