Os04t0569100-01

Name: Os04t0569100-01
Type: mRNA
Description: Similar to OCL1 homeobox protein.
Source: build5_rep
Position: chr04:29099841..29106180 (- strand)
Length: 6340 bp
Alias: AK112099
  AK111914
Expression: Search RiceXPro database by AK112099
GO: Molecular Function: transcription factor activity (GO:0003700)
  Cellular Component: nucleus (GO:0005634)
  Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
  Molecular Function: sequence-specific DNA binding (GO:0043565)
  Molecular Function: transcription regulator activity (GO:0030528)
  Molecular Function: DNA binding (GO:0003677)
  Biological Process: regulation of transcription (GO:0045449)
Gene_symbols: GL2-4
  Roc4
InterPro: Helix-turn-helix motif, lambda-like repressor (IPR000047)
  Homeobox (IPR001356)
  Lipid-binding START (IPR002913)
  Homeodomain-like (IPR009057)
  Homeodomain-related (IPR012287)
  Homeobox, conserved site (IPR017970)
KEGG: Os04t0569100-01
Link_to: 2865 (Oryzabase)
  Lipid-binding START (Plant Gene Family Database)
Locus_id: Os04g0569100
NIAS_FLcDNA: 002-108-E06 (Online Clone Ordering)
Note: Similar to OCL1 homeobox protein.
ORF_evidence: Q9XGD7 (UniProt)
Transcript_evidence: AK112099 (DDBJ, Best hit)
load_id: Os04t0569100-01
primary_id: 3675629
gbrowse_dbid: assembly:database
Parts:
Type: 3'UTR
Source: build5_rep
Position: chr04:29099841..29100371 (- strand)
Length: 531 bp
parent_id: Os04t0569100-01
primary_id: 3675640
Type: CDS
Source: build5_rep
Position: chr04:29100372..29100722 (- strand)
Length: 351 bp
parent_id: Os04t0569100-01
primary_id: 3675639
Type: CDS
Source: build5_rep
Position: chr04:29101690..29102063 (- strand)
Length: 374 bp
parent_id: Os04t0569100-01
primary_id: 3675638
Type: CDS
Source: build5_rep
Position: chr04:29102137..29102314 (- strand)
Length: 178 bp
parent_id: Os04t0569100-01
primary_id: 3675637
Type: CDS
Source: build5_rep
Position: chr04:29104009..29104236 (- strand)
Length: 228 bp
parent_id: Os04t0569100-01
primary_id: 3675636
Type: CDS
Source: build5_rep
Position: chr04:29104335..29104436 (- strand)
Length: 102 bp
parent_id: Os04t0569100-01
primary_id: 3675635
Type: CDS
Source: build5_rep
Position: chr04:29104521..29105228 (- strand)
Length: 708 bp
parent_id: Os04t0569100-01
primary_id: 3675634
Type: CDS
Source: build5_rep
Position: chr04:29105346..29105463 (- strand)
Length: 118 bp
parent_id: Os04t0569100-01
primary_id: 3675633
Type: CDS
Source: build5_rep
Position: chr04:29105561..29105853 (- strand)
Length: 293 bp
parent_id: Os04t0569100-01
primary_id: 3675632
Type: CDS
Source: build5_rep
Position: chr04:29105976..29106044 (- strand)
Length: 69 bp
parent_id: Os04t0569100-01
primary_id: 3675631
Type: 5'UTR
Source: build5_rep
Position: chr04:29106045..29106180 (- strand)
Length: 136 bp
parent_id: Os04t0569100-01
primary_id: 3675630
>Os04t0569100-01 class=Sequence position=chr04:29099841..29106180 (- strand)
GCACGCACTG CTGCTGCTGC TCGCTCTCGC TTTGCTTCCC CTAATCTTCT CCCGGGCCAG GGGGGAAGAG GGGCGGAATT
CGGGCACGAG CTTTGGAGTT GGAGATCACT TCGGCGACGG CGTGGTCCCC GCCGGCATGC AGTTCCCGTT CTCCGGCGCT
GGCCCGGGCG TCTTCACGTC ATCGCCGGCG CTCTCCCTCG CGCTGGTACG CGCGCCTTCT TCGCTGACGT GTTGGGGGGT
TTTTGTTTCT TTTTTTTTTT TGGTGGTGAT ACGGTCGAGT GATTCGGAAA GGCGCGTCTT TTCTTTGGTT GGTTCGGTTT
GTCGCAGGCG GACGCGGTGG CAGGCCGGAA CAGCGGCGGC GGTGGGAAGA TGGTTACCGC GGCCCATGGC GGCGTCGGCG
GAGGAGGAGG AGGAGGACGC GCGAAGGCGA GGGACGCGTT GGAGGTGGAG AACGAGATGA GCCGGTCCGG GAGCGACCAC
CTCGACGTCG TCTCTTGCGG CGACGCGGGC GGCGGCGGCG GCGACGACGA CGATGACGAG GACGCCGAGC ACGGCAACCC
GCCCAAGCGC AAGAAGCGGT ACCACCGCCA CACGCCGCAG CAGATCCAAG AGCTGGAAGC GTAAGCGCGC CCCCACCCAC
GAACAACGAT TCGTTGCATT CTCCTGTGCT TGGCTGCTTG CTTTGGCTCA TGCATGGATA CTGGCTCATC GGTGCAGGAT
GTTCAAGGAA TGCCCCCACC CAGACGAGAA GCAGCGCGCC GAGCTGAGCA AGCGGCTCGG CCTCGAACCC CGGCAGGTCA
AGTTCTGGTT CCAGAATCGG CGAACGCAGA TGAAGGTAAG CGATCGAAAC GAACAGCAAA CCATCTTTGC ACTCCGATCG
ATGGTGCAGT GCAGTTCTTG ACACTGTGTG TGTGTGTGTC TCTCTCTCCC TGTGGTGATT GAATTGGCAA AGATGCAACT
GGAGCGACAC GAGAACTCGC TGCTGAAGCA GGAGAACGAT AAGCTGCGGT CCGAGAACCT GTCAATCCGG GAGGCCACGA
GCAACGCGGT GTGCGTTGGC TGCGGCGGCC CGGCGATGCT CGGGGAGGTG TCCCTGGAGG AGCACCACCT TCGCGTCGAG
AACGCGAGGC TCAAGGACGA GCTCAGCCGA GTGTGCGCGC TCGCCGCCAA GTTCCTTGGC AAGTCCATCT CTGTCATGGC
GCCACCGCAG ATGCATCAGC CTCATCCTGT GCCAGGCTCG TCGCTGGAGC TTGCGGTTGG GGGTATCGGT TCGATGCCAT
CAGCCACGAT GCCCATCTCG ACGATCACTG ATTTTGCTGG CGCCATGTCC AGTTCAATGG GCACGGTGAT CACGCCCATG
AAGTCTGAGG CTGAACCATC GGCAATGGCT GGCATTGACA AGTCCTTGTT CTTGGAGCTA GCAATGAGTG CAATGGATGA
GCTAGTCAAG ATGGCTCAGA TGGGGGATCC GCTATGGATT CCAGGTGCCT CCGTACCTTC CTCGCCGGCA AAGGAGAGTC
TAAACTTCGA GGAGTACCTA AACACCTTCC CACCTTGCAT CGGGGTGAAG CCTGAAGGGT ATGTATCAGA GGCATCTAGA
GAATCTGGCA TTGTCATCAT TGACGATGGC GCCGCGCTTG TGGAGACCCT CATGGATGAG GTTGTGCTTG TGCCACCTTA
CCCCCTTTCA TGTTTCTGTT GCTTGTTTGT TTGGACTCAC CTGTAGTTTG AATTCTTGCG ACAGCGACGG TGGTCCGATA
TGTTCTCATG CATGATTGCC AAGGCATCAA CCACTGAGGA GATTTCTACT GGTGTTGCTG GGAGTAGAAA TGGTGCATTG
CTTCTTGTGA GTGATGAACA TTCTGTTGTG GCCATCCCAT GAGTTTCATG TGGTTAATCA TACTAGCATA ACCCCTGAAT
GGTAAATTTC GATCATTGCA ACAGATGCAG GCAGAGCTAC AGGTGCTTTC TCCTCTTGTG CCTATTAGAG AGGTGAAGTT
TCTCAGGTTC TCCAAACAGC TGGCTGATGG TGTATGGGCT GTAGTGGACG TTTCGGCTGA TGAATTGATG AGGGATCAGG
GCATTACTTC TGCATCCTCG ACTGCAAACA TGAACTGCCG AAGGCTGCCT TCTGGTTGTG TGCTGCAGGA CACTCCAAAT
GGGTTTGTTA AGGTACTGAG ACTGATTATC TTTGTTAGCT CCTGCTCCTT AGATATTCTT AGGTAAATGT CTTAAACCGT
GATATCCTTG ACTAGTTCAC TTCAGGGTAG TATGTGGTTT TACATCTATT AATTCACACT AGTCAGCATG CTATCGGTTG
ACGTGAAACT CATCTACCTT GCAAAGTCGC AGCTCGGTAG TACCCACGAC GCTGCCACTA GAAGTCTGTC AAAACCAGCC
ATATTAGTTG CAAAGCTTGT TAGCTCTACT CATATGATAA TCATACATAT GGAGAGTGCT TTATTAGTTC AGGCTCTCTG
CAACTAACAT GACACTCATG GAAAAGAGTA TTCGTGTATT CTTTCGTAAT GTTTCAAATA ATGTATGTTA GTTTAATGTG
TCATCTGGTG ATCACCATGC AATATTTTGT TCGTATTCAC AAGTCATGGC GTAGGCTCAT GTCTCCTATA GATATGTTGT
GGTTATGAGT CCATAATCCG AAGTAAAGTA TTGTATTGGT CAGCGGGGAG GGGAGTAAAT AAATGATTTA GGAATACTTA
AGTGGTTCTG AGATCCAACA CTTTTCCCCA AGTACGCTCC CTTGCTTTTG TTTAGTCCTG AGTTCAGTTC TCCTAGGGGA
TTAGATACTT CTTCTACTCC TGGGATGGTG CCCCTTGGGT AACTTCTTGT CCGCAGTTTA ATCGATGCGT CTCCTCGTTG
AAATCTTGAC TGCTTCCTCT ATTGTTTTGT CTCAATGTAA AAGTCCTCTT CACCTTGGGT TTTGTACCAG AGTTTTATAT
AGCCTTGATC CAAATTGCTC TGGGGCGCAC ACATGCACGA ACGATTCTAT TCAAAATTCT AAATTGGACA TCTGAATGGG
ACAAATATAT CTAGTCTACA ATGGTAGAAA CATGATTTGA TGAGTTATAA CGTCTCATTA CTATAGATTA CACTGTATAA
GTTAATCTGA TGTAAACCCA CAGGTTGAAA GCAGGAAGTG GTTCTTTATT TTAAGGGTTC AGGAACACAA TATTTTGGAA
CACTAGTGGT GTGCCATTCT TGGGGCATAC CATAAGTCAA AATAATTAAC GATGAAGATA CTGTGATCAG AACCATGCTT
TATAAAATGT AAACAAAGTC AATCTCAGAC AGATCAGCTA ATCCTAGATC AAACTAGAGA TACTGTCGTC TCTCAAGATT
TCTACTTTTC TTCTGTAATT TCATTTATGT GCTTTTGGTG CTTTTACAGT ATTTAGTTCA AATATCAGTA TTTTCTGAAG
TCTATAATCT CTCTATTGAT CAGTTTCTGG ATCTGCCTCC TGCTTTCATG GTACTTCTAT GGTTTATTCT ATGCAAAACA
GAATAGACAA ATGTGTAACT ATTATCCATT AGTCCTATGG CCTATGGTTC TCTTACAAAG TACTAGTTAC AATGCTGGGG
CCCCACTATG GGCTAATATT TCGAGGTAGC CTCTATTTTA AAACATTGTG TTGATGTCCT TTTTATGTTC CATTGATTGG
GCAAAAAGAA ATTAAAAAAA AACTTAGATG GAAAAATAAT ATTAATTGTA CCATTCAGCT TGTGTAGTAG TTGCGTACTC
CAGGAAAACT GCACCTCAGG CCTCTTTTGG TGTATTACCT CTCAAGACAT TTGCATTTTG TGCGTGCATT TAAGTCCTAA
CAGCAGATCT TGAATGGACG CTGTAGGTCA CATGGGTTGA ACATACAGAA TATGATGAGG CATCTGTGCA CCCGCTCTAC
CGGCCTCTTC TCCGGTCTGG TCTTGCCCTT GGTGCAGGGC GATGGATCGC GACATTACAG CGGCAGTGCG AATGCTTGGC
CCTTCTCATG TCTTCTATTG CATTGCCAGA GAACGACTCA TCAGGTAAAG AAATTCAATA CTACTGCTAA CTTTCAATTG
GATCCACCCT TCTAATAAAG TGCTACATTT GCAACAGCTA TCCATCCTGA AGGTAAACGG AGCATGTTGA AGTTGGCAAG
GAGGATGACG GACAACTTCT GTGCAGGGGT GAGCACATCA TCTACCCGTG AATGGAGCAA ACTGGTTGGA TTGACAGGCA
ACATTGGGGA GGATGTGCAT GTAATGGCGC GGAAGAGTGT GGATGAACCT GGAACGCCGC CAGGTGTGGT GCTTAGTGCT
GCTACATCTG TGTGGATGCC TGTGATGCCT GAACGGCTCT TCAACTTCTT GCACAACAAG GGGCTGCGTG CTGAATGGGA
TATCCTCAGC AATGGTGGCC CTATGCAGGA GGTGACAAGC ATTGCCAAGG GGCAACAGAA TGGCAATACC GTATGTCTAC
TGAAGGCTAG TGTGAGTATT AGCTAACAGT CTGCCACAGT TCTGTTCATA GCTTGCTACT TACTAAACAG CATCATTAAC
TGACTTGTGG GGGAGACTGC CATTTCAAAA TTGTTGCAAA CCTAAACACA ACATTTTAGA ATTTGTTGGG GGCACCACAT
CACTAAACAC TCTAAACAAT CACATGCTTG TCTGAAACCA GTTTAATGTG AAATAATTTA GAATTTGTGA AAAGAGTACC
CTTGCTTGGC CATCTTAGGT ATTTTATATT GCTAAAAGAA AGGAAATGAA GCCAAGGAAG TACTGCATTA GCTGGTGGGG
AAAGGATAAG AACTATGTCT ATTCACAACT GGAATTTTGT GAGTCTTAAT TCTGTAACGG TTGTACCAGT GATGATATAG
TTGTACAAAT ACAAAACTAT ATGTTTAGTC ACACATTTGG CAATTGCCTA ACAAATACAA CTCTACTATA ATATATAAGC
ATGTATAGAA ATTCCGCTAG GTCAATAGAG ATTAATGGAG GTTAGAAAGA TGCTACACAT TTCCAATCCT GCAATCTAAA
TGATGACATC AATGTAAGTG CCCAGATATT CCATTAAGAA AAAGAGAAGA GTATAAGGCG GAAAAACTAG TTTTTGACTT
ATCAAATATT GTTGGGAGTC AATAATCTGC AGAACCTAAC TTTACACAGT ATCTGAGGAA GGGTTGCTGG TAGGGCCAAA
ACAGAGGAAC AAATATCTAC TACTAGAAAA GGTATTGTGC CTGACCTATT CACAGCCCAA ATTTTGCAGT CAAACTAACT
TCATACATAA CAAAGGTCTA AAATCTTTAA CGGCTTCAGT GTAATCTCGG TCAGTCAACT GTGCCTGTGT AGGTCACTCT
GGATCATGAA AAGCATCACT GACAGAAATT ATCAAATCAT TTTCTGTTTT GATCTCTGGT AGTCTTCTGT TCCCCTTACC
AAAAATTTCA CTGTGCAGCC CACCAAAGAC AAGCAGAACA GCATGCTGAT CCTACAGGAG ACGTGTGCAG ACGCATCCGG
TTCAATGGTT GTGTATGCTC CTGTAGACAT CCCAGCAATG CACCTTGTCA TGAGTGGTGG GGATTCGTCA TGCGTCGCCC
TTCTTCCATC AGGTTTTGCC ATCCTGCCTG CTGGGCCTAG CATCGGCGCA GATCACAAGA TGGGCGGTTC ATTGCTCACC
GTTGCATTCC AGATACTTGC CAACAGCCAG CCCAGTGCTA AGCTCACGGT GGAGTCAGTC GAGACCGTGA GCAACCTTAT
CTCCTGCACC ATCAAGAAGA TCAAGACGGC GCTGCATTGC GACGTGTGAA CCCAACAAGG GGGGACTTTT GGCCTAGTGG
GAGCGGCTGT GGCGATGAGC CTGAGTCAAG AACGAACCGC GACATAGGAA GGGACCTTTG CTAGGTGGCA AGGACCGGAC
GGGGCAGGTC CTTAGCACAG AGCAATGGTG GTGGTTCGGG TATTGACTCA GCCTCTCCCG CCTCCGTTCT CTCCTGTGAC
TGGTGCATGT TGAAGTGAAC CTGCATTTTG GACGCCATGT AGCAGGCCAT CTTTCTTTCT TTTTCCTTTT TCTTTTTCTT
TTTCTTTTTT TAGGGAGAAG GGAGTCATCT GTGTTTTTTG TTGGCTGGCT CAGGGTGTTG GTGTTTCTGG TTTCTAGCTT
TTGTTACAGG GAGATGTGAT ACATTTTGTA GAAGCTCCGA ATTGTCGTGC TGGTATGTGA GGTTCTGATC ATAGGTCTGT
GTTTGATAGT CTCGAGCTAT CAACGCCTGG CAAATGCAAA CCTTGTTATG CTAAAATATG TTTTAGATCA ATCTGATTCT
GAAAGCTGTT TACATGTCCC