Os09t0457400-01

Name: Os09t0457400-01
Type: mRNA
Description: Alpha-amylase isozyme 3A precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase).
Source: build5_rep
Position: chr09:17994992..17997251 (+ strand)
Length: 2260 bp
Alias: AK063988
  AK099330
  AK099392
Expression: Search RiceXPro database by AK063988
GO: Molecular Function: catalytic activity (GO:0003824)
  Biological Process: carbohydrate metabolic process (GO:0005975)
  Molecular Function: cation binding (GO:0043169)
  Molecular Function: alpha-amylase activity (GO:0004556)
  Molecular Function: calcium ion binding (GO:0005509)
Gene_symbols: AMY1.2
  Amy3A
  Amy5
  RAmy3A/B/C
InterPro: Glycosyl hydrolase, family 13, catalytic region (IPR006047)
  Glycosyl hydrolase, family 13, subfamily, catalytic region (IPR006589)
  Alpha-amylase, C-terminal beta-sheet (IPR012850)
  Alpha-amylase, plant (IPR013775)
  Glycoside hydrolase, subgroup, catalytic core (IPR013781)
  Glycoside hydrolase, catalytic core (IPR017853)
KEGG: Os09t0457400-01 (EC:3.2.1.1)
Link_to: 6860 (Oryzabase)
  Glycosyl hydrolase, family 13, catalytic region (Plant Gene Family Database)
Locus_id: Os09g0457400
NIAS_FLcDNA: 001-124-D12 (Online Clone Ordering)
Note: Alpha-amylase isozyme 3A precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase).
ORF_evidence: P27932 (UniProt)
Transcript_evidence: AK063988 (DDBJ, Best hit)
load_id: Os09t0457400-01
primary_id: 3782075
gbrowse_dbid: assembly:database
Parts:
Type: 5'UTR
Source: build5_rep
Position: chr09:17994992..17995134 (+ strand)
Length: 143 bp
parent_id: Os09t0457400-01
primary_id: 3782076
Type: CDS
Source: build5_rep
Position: chr09:17995135..17995233 (+ strand)
Length: 99 bp
parent_id: Os09t0457400-01
primary_id: 3782077
Type: CDS
Source: build5_rep
Position: chr09:17995360..17995490 (+ strand)
Length: 131 bp
parent_id: Os09t0457400-01
primary_id: 3782078
Type: CDS
Source: build5_rep
Position: chr09:17995900..17996707 (+ strand)
Length: 808 bp
parent_id: Os09t0457400-01
primary_id: 3782079
Type: CDS
Source: build5_rep
Position: chr09:17996798..17997082 (+ strand)
Length: 285 bp
parent_id: Os09t0457400-01
primary_id: 3782080
Type: 3'UTR
Source: build5_rep
Position: chr09:17997083..17997251 (+ strand)
Length: 169 bp
parent_id: Os09t0457400-01
primary_id: 3782081
>Os09t0457400-01 class=Sequence position=chr09:17994992..17997251 (+ strand)
ACGCAGCAAG AGCCGATCGA TCATTGTCCA AGTCTCCAAG CGATCAGCTA GCTGACTTGA CGACGCTGCG AGCAGCGGCA
GCAAGAGAGC AGCAGCACAA AGGGTTCCCC TTTCACAAGT GTCCGGCCGG CTGCACGTAG GCCATGGGGA AGCAAATGGC
CGCCCTGTGT GGCTTTCTCC TCGTGGCGTT GCTCTGGCTC ACGCCCGACG TCGCGCACGC GCAGACGCAG ATCCTCTTCC
AGGTGCTTTA TTCATTTCAC CCATAAACGG GCAAGGGGGT TCACCTGTGT AAAATTATCG ACAGCAAGTC AGAACGGCTA
ATATAATTCA CGTACAACCG AATACGTGTC TGTAACATTT TTGTGCAGGG TTTTAACTGG GACTCGTGGA AGAAGCAGGG
TGGTTGGTAC AACATGCTCA AGGACCAGGT GGGCGACATC GCCAGCGCCG GCGTCACGCA CGTCTGGCTC CCACCTCCCA
CGCACTCCGT CTCGCCTCAA GGCCAGCAAG CCATGCATCT CCTTCATCTC GTTACGCTTC TCTTTGTAGC ATGtccgttt
ctaaatattt gacaccattg actttttagc atatgtttaa ccgtttactt tatttaaatt tttttgtgaa atatgtaaca
ctatatgtat acatataagt atatttaaca ataaattaaa tgataggaaa agaattaata attatttaaa ttttttaaat
aagatgaacg gtcgaacata tttaaaaata taacggtatg aaatatttag aaagggaggg agTATATTAC GTGACGTAAA
GTGTGTTACG GCCAGTGTCT TACTGCAATT ATCAGCTGAT CTAGCTCATC AGGCAATTGA CATGTATGCA TGCATGTGTT
TAAATCGATT TTTCCCGTGC ATGCACGCAG GCTACATGCC GGGACGGCTC TACGACCTGA ACGCGTCCAA GTACGGCACC
AAGGCGGAGC TCAAGTCGCT CATCGCCGCC TTCCACGCCA AGGGCATCAA GTGCGTCGCG GACATCGTCG TCAACCACCG
CTGCGCCGAC GACAAGGACG GCCGCGGCGT CTACTGCATC TTCAAGGGCG GCGGCCCGCG CGGCTGCCTG GACTGGGGCC
CCTCCATGAT CTGCTGCGAC GACACGCAGT ACTCCGACGG CACGGGCCAC CGCGACACCG GCGCCGACTT CGCCGCGGCG
CCCGATATCG ACCACCTCAA CCCGCTCGTC CAGCGGGAGC TCTCCGACTG GCTCAGGTGG CTCAGGAGGG ATGTCGGCTT
CGACGGCTGG CGCCTCGACT TCGCCAAGGG CTACTCGGCG GCCGTCGCCA GGACGTATGT CCAGAACGCC AGGCCGAGCT
TCGTCGTGGC GGAGATATGG AACTCCCTGA GCTACGACGG CGACGGGAAG CCGGCGGCCA ACCAGGACGG CCAGCGGCAG
GAGCTCGTGA ACTGGGTGAA GCAGGTTGGC GGCCCGGCGA CGGCGTTCGA CTTCACGACC AAGGGCATCC TGCAGTCGGC
GGTGCAGGGC GAGCTGTGGC GGATGCGGGA CAAGGACGGC AAGGCGCCGG GCATGATAGG CTGGTATCCC GAGAAGGCCG
TCACCTTCGT CGACAACCAC GACACCGGCT CGACGCAGCG GATGTGGCCA TTCCCGTCTG ACAAGGTCAT TCTGGGCTAC
GCCTACATCC TCACCCACCC AGGAGTACCA TGCATCGTAC GCAATTAACT TCTCAAAGCT TGTTATAACA TCCATGGATC
GATGCTTCAT CATTCATAGG TGACAATTTT GTTTTGTGTT GTTTAGTTCT ACGACCACGT GTTCGACTGG AACCTCAAGC
AAGAGATCAA CGCGCTGGCG GCGACGAGGA AGCGCAACGG GATAAACGCC GGGAGCAAGC TGCGCGTCCT GGCGGCGGAG
AGCGACATGT ACGTGGCGAT GGTCGACGAG AGGGTCATCA CCAAGATCGG GCCGAGAATA GACGTGGGCA ACATAATCCC
GTCGGACTTC CACATCGTGG CTCATGGCAA TGACTACTGC GTCTGGGAGA AGAGCGGCCT TAGAGTCCCA GAACCAGAAG
GTCGGCGCTA GAAACGGCTC GCAAGCTAGC TACACAGTTC TTAATAACTT GGTCGCAAAA AAAAAGTTCT TAATAATTTG
TACGAGAAAT GTTCGTTTCT GTTTGCATAT ATAGCTTATG AAATCTTACC AATATATACT GCTCTGTTTT CTATAGTTCA
TCCCGGAAAT TTGAACTTGC