Os03g0215400

Name: Os03g0215400
Type: gene
Description: MADS-domain-containing protein, Sexual reproduction (Os03t0215400-01)
Source: irgsp1_locus
Position: chr03:6052902..6061365 (- strand)
Length: 8464 bp
CGSNL Gene Name: LEAFY HULL STERILE 1
CGSNL Gene Symbol: LHS1
Note: MADS-domain-containing protein, Sexual reproduction (Os03t0215400-01)
Oryzabase Gene Name Synonym(s): MADS box gene1, leafy hull sterile1, leafy hull sterile 1, LEAFY HULL STERILE1, naked seed rice, over developed palea, MADS-box transcription factor 1, Protein LEAFY HULL STERILE 1, Protein SEPALLATA-like, abnormal floral organs, long grain 3b, DLN repressor 80, DLN motif protein 80, Oat-like rice
Oryzabase Gene Symbol Synonym(s): OsMADS1, LHS, lhs1, lhs, lhs2, op, nsr, MADS1, LHS1/OsMADS1, Lhs1, AFO, OsLHS1, OsLG3b, LG3b, qLGY3, LGY3, DLN80, OsDLN80
RAP-DB Gene Name Synonym(s): LEAFY HULL STERILE 1, MADS box gene1, leafy hull sterile1, leafy hull sterile 1, naked seed rice, over developed palea, MADS-box transcription factor 1, Protein LEAFY HULL STERILE 1, Protein SEPALLATA-like, abnormal floral organs
RAP-DB Gene Symbol Synonym(s): LHS1, OsMADS1, LHS, lhs1, lhs, lhs2, op, nsr, MADS1, LHS1/OsMADS1, Lhs1, AFO
Transcript variants: Os03t0215400-01
load_id: Os03g0215400
primary_id: 39350
gbrowse_dbid: annotation:database
>Os03g0215400 class=Sequence position=chr03:6052902..6061365 (- strand)
GATCAGGTAG CCAAACCACA CCACCATAAA GCTAGCTTGC AAAGGGGATA GAGTAGTAGA GAGAGAGAGA GAGGAGAGGA
GGAGGAAGAA GATGGGGAGG GGGAAGGTGG AGCTGAAGCG GATCGAGAAC AAGATCAGCC GGCAGGTGAC GTTCGCCAAG
CGCAGGAACG GCCTGCTCAA GAAGGCCTAC GAGCTCTCCC TCCTCTGCGA CGCCGAGGTC GCCCTCATCA TCTTCTCCGG
CCGCGGCCGC CTCTTCGAGT TCTCCAGCTC ATCATGGTAC GTATAGCACC AAACCAACGC CGCCGCCGCC GCCGGCGTGC
TTGTTCCGGC GCAGCAGCGC ATCATCATCG ATCGATCTAA GTCTAATAAG ATAATCAATT AACCCTAACT AAATAAAATG
ATAAGAACAG TATATATGGT TATGATCAGT GAAACACTCG TCGATCTGAG GGAAAATCCG GTCGAGATCG AGGGAGTGGG
GAGACAAATT GAACTGCAGG CTAGCTAATT TAATCGTGTC GATCGATTTC TAGCTTTTGT TGATCTTTAT ATATACGAAC
GCATGCACTT TCCCCTTTGT TTTTTTTTCC CTTCGATCTG CTTGGAGCTC ATATGCTATA GATCTTGGGG CATATGTATC
TGTCAGCTTT CGAGAGCGGC TATGTCCATC GATCCCTCTT TTTTTTCTCT TTCTTTTTGT AGTATCAGCT GCCATGCATA
TATCAGATTT CGTTTTCGCG TGCTTTTAGT GCTTCACTTA TCTGTTCGCC ATATCTGATT TCTTCTCATC CTTTGCCGAC
GTCGTCTGAG CAGTCTGACC TCCAAGATCT GGCGAAATAA ACCTCAATCG TTGCTATTTC TTGCCTTGAA TCTGCATAAA
CATGACAATA GATCCTTCTA TTTTTTTTCT TCAAGACAAG ATCTTGCTGT TTCTTCCCTT GCTATTTTTC ATTCAAAGAT
TCTTCTTTTT TTTCTAAAAG AACTATATAT ATATGAATCG AGTTTCATCT TCATCGATCT GTCTCTCTCC TTTTGTTTTC
TGTAAACACA CACACGAGCG TACGTATATA TACTCTCATC TCTACTTTTA TCAAAAAGAA ACACACATGT TCTAGCTTCA
GATCCCAAAA TAATCAAACA GGAAAATATA TATAATATGC AATTAGTTCA GATCCCGAGG TAGATTTCTT GATTATTTCC
ATTTTCCAAA GTGAGGCGCG CGACAACTCG ACGCGGTTCC TCTTTGCACA CACACACAGT ATAACTGTAC GCAAGGGGTA
AGAACAAAGG AGCAATCCCT TCTGGGTTGC TGCTTGCTTC TCCCATTTTT AGCTATTTCA GAATTTCACT TTCTGAGACT
CATCTCTCTC TCTCTACCAG CTGCATTATT TCACTTCCCT TTTTTCCCAT TTCTGCCTAT TACACGGATG GCCTCTTTGT
GGACTCGTCC AAATTGAGGC ACGGTAGCTG GTGTCAAAAT GAACCTGCAG GCCCAGCCCG GTTATGTATA TGTATAGCTA
TATAGCTTTT CTTGCAAGAG GTATATACAC TTTGTAGTTT TAGCCAGTGG TCCAGCTAGC CATGGATGGA TATATTATAC
ACACGTATAT ATAGTACATG TATGTACGAG TGTTAATTAA ACTCGTTTAG TTAATTTCCA AAGTCCTTTT TTATTACTAC
AGCTAGCCTG ATCTGTGTTT TAGTGTGTTA CTGTTCCATT AGTTACTGTT CTATTGAAGA GAGCGCGTAC ACGTTGTTGT
TTTATTTCTC TTTTTCCGAT CCGGTGTTCC TTTTTTTTTT CTTTTGGTCA TCTTCCTCGA GTCCCGAGCA GTAGAAATAC
TACTACTGCC CTGCAAAGCA CACACATCAA GTGATGTGTT TTTCTTCAGA GCTTCAGACG TGTCATATCA AGCAGGTCAG
CACGCATTAC ATGCAATATA ATACTCCTAT ATGGACACGC AGAACTCACT TTGATCATGT GTGACCAAGC TGGATGAGCC
GTTAATTTGT TGTTGGGACA GGGTATTGAA TCATTAATTG CGGTTTTTCC TCTTTTTCCT GTCTTGTTCT ACTCAGAGAA
TTGAACGGTG AACTGTATAG GCAGAGCTAG TCCTGCATGC ATCGGTTTTC TGAAATTATT AACTATACAC ACACATGCAC
AATTGCTAAA TCTGGTATAC ATGTCTTGCT GACTCACATA TTCGTTCCTc ctaattaaag cactcattta tttattttac
acggttttca atgatatact ttaaatatta atttgtttga tgttatattt ctatgaatat gaaattagca tcatatgaaa
atactttaaa acaaatatag tgatataaca tgcataatac ttagcatata cttgtatgat tagcatggtc attaatcaaa
agttgccgag cttgaatttt ctaaaggaca gggtgccttg taatttggga cAAAGAACCA TTGGAAAACG AACACAAAGA
AACTTTCATT ACATTAATTA TCTGAAAAAG AAAGAAACTT TCATTAACCT CGTACAGTAA ATAGAAAAGA GGAACTATGC
ATGTATAACG AAATAGCTAG GATCACAGCA ATTAATTAGT TGTTCTCTGG CTTTACTTTT CTTTTGGAGT AACTTTAATT
TTTCTTTGGA GGATGAAGTA GTTAATTATA CAGGTTTCCA ATTCTTGTTT GGTAGATCCT TTTTTATGTT CCTGGAAGAG
CTACTATATT TTTGTACTTG AGATGGAGCT GAGGTACCGT TATCTAGCTA TGTCGCATCT CAAGGAGTTA CGAATTAACA
TATATCACCA ATATCACAAA AATGCTCCAT ACAAAAAGAT CATAAAAATT CTTGAATTTG CTTGCTGTGT TTTTTTACTA
TATATGCTTG GAATTAAAAA AATGACTGAA TTAATCGTTT GCAATCTTTA ACGGTGCGTG CAGTACCAAA TTGGAAAGGT
ATCCACTTGT TCAAACTTAA AAATATTTTT TTTACTGATA TTACTCTCTA AAAAGGTGCA TGGGAAATGC TATTGGAACT
ACTAGTTTTC GGGACATTAT AAGAAAATGT ATGCATATAT ATATATATAT ATGGACTTAT GATATGGGCC AGATACCTAT
ATATATAGAA GATATATGTG TGCTACTACC TCCATTCAAC AATACAAGCA TTTGAGCCAG TTCTGGTCAA GGATATAAAC
ATCCTGcact attagcttgt acttgtcaaa ttaatgatct ctaattcaaa ctttcttgct actttacccc caatcaccct
tcccaaccat cttaatcttt gctaaacatt ctagaaatgc ttattgttgg atggaggaag TAGCTATTAA CTACTCCTAT
AGTTTTTTTA ACTACCTCAT ATTAATTTTG TAATCCTAAT AAATGCACTA TATATGCCCA CTTTTACCGT GTTTCCAAAC
TGGCATCAAG CTAAAATGAA TGTTAATTTA GTTTCCCCAT AATTTTATGA GAATCGCAAA ATTGTACCTA TTTTAAACAA
ATCAAAGTCA CTGAACAAAT GAACGGAGGT TAATTATTAT ATTCACCTGA TATAGGCAGA CTAGGTTGGG CTAAGAGGGA
CATTAATTTG GGCATCTAGG TTTTGAAATG GGAGATATGG AGAGTGAACC AAAAAAAAAC TGTTAGTGAA TTAGTACATG
ATATATACTA GTATTATTAG TGGGAACCTA GAGAAATGCA AAGAATGTTG CGCAAATCAT CATTTTGTGT AAATTAAAAT
GGGATATACA CTATGGGGAA CTATAGCTGA GTGTCAATCC CCACCTTTTG TTTGTAATTA AACATGTGTT TATGCTACAA
ATTACtccct ccgtactcat aaaggaagtc gtttaggaca atgtttaagt caaaccttgg gaatataaat tatgaataac
tctcaagttg ttgagtttga aaatgtaaaa aatatatgaa tagatttgtc ttgaaaaata ctttcataaa agtatacata
tatcactttt caataaatat tttatagaaa caagaagtca aaattgtgtt ttggagaccg tgtcactgtc caaaacgact
tctttacgag tacggaggga gTATGTTCTA CATATTGGCT AATATTGTTG AACCCTTCGG ATCAATCTTA GACACAGTAG
CCATTTTACC CACTGATGCA GCAACCCAAT TAGGTATCTA CTAATTAGCA TCATAGTGCA AATTTGTACT TTTCAAGTGG
AAAATAGAAA TTATTTGTCC TCCTTTACTT TAATTTCTTG ATAATATGAT ATATGTAACA TAATTTCTCT TTGCTCCCAA
GCATATAAAA AACTTCAATT TGATATGTCC AAAAAATGTC ATATATATAG CATGTAATCC TCTGTGGCAA ACACGTTTTT
TTGGCTCAAA TTAAGAAGAG GAAAAAATGG TATATATGTA TAAACCTAAC AAAAATGCCC CAACAAGAAT AGCTTTATTT
TGTGAACAAG GTCATATAGA CCAGGGAACA AAAACCCTGT ACTGTGCTTC TATTTTGCTA TGCATTTTGG ATAAGTGATT
CTACAGAAAT ATGACTATAT AGGAGATATT CTCAAATCTG ATCTTTTCTA TTAATTAGCC CATACGATAT GAAGACATAT
CTTCCTCTGT TCTGATTCTA TTTGTTGTGC TAAGATAGTC TACAGGATTT GCTAGGTTGC CACCTGCCGT CAACAAAATT
CAGCTCATCA GATTTTGTTA TAGTTGCTAG CACAGTTATA TTATACGTAT ATCTCTTTTG AGAATATATT ATTACAGTCC
ATTGATTTTT CTTGTAGAGT GGAAAATATT ATTGTGTTTT CTAACCGTAG GAGTTCATGT GGTGTTATTT ATTTTGGATA
ATGTGGTGTA TTTTTATGAG AAATCAGGAT CGCGTCAACA TGAAAGTTTC ATCTAATACA TTATTAAGTG CATCGTAGCA
ACAATTCATA TATTAACTCA AAGGTAGCTT TGAAATTAAG ATGCATGTCA TTAATGCATA ATAGAGAAAT CAGGTTACCA
AATTATATTA AGCCCATATA TTAACTCAAA GGTCATAGCT TTGACAAATG CTCCTTACAG ATTTCTCCTT GAACCAATTT
GTAAAATATC CTCTCCTTTT TTTTTGCGCG AACGCTAAAT ATCCTTTGTT TAACAACCTC GTCAATTTGT CCATTTCATA
TGTGTGAACA TCCTTGTACA TTCTTTTTTG TGCCGTTTGA AATAAAACTT TGAATAAATA TGCACAACTT AAATGCTTAA
ATGTCAATTG GATTTGGATG AAACAAAACC AAAGTTTTAG AATTTACGAT CTATCATTAT GAATTTATGT ATGATATATC
ACACTCTTTC TGAATAAACT TCAGAATAAT ATAAATTGCT TAATTATGGT ATACATGAGC ATATATAGCT TGCGCAAATC
AAAACTGTAC AGTAGGTGTG TGTTCAATTC AGAATAGTAT TCTATTTCGA ATTTAAATTA ATAATACCTT CTGTAGTAAT
TTCTATATTA GAAAATTTAT ACATACAAGG AGCACTGTTA ATTAGCTAGC TAGCTTTATG GGTTCCACTA ATCAATTTAT
ATATAATAAT GTGCTAAACT ATACAGCGTC CATGCATTTT TATTCTTCAT GCCTAATTAA TTTGATTCAC CATTAATTAA
TTCTACGTAC AATGTTCGAA TGTGTGACTA TATATGCTGC ATCTGCAGTT CTGCACCTCA TTCAGTACTA AATTCAAGTT
CAGGTTCATT AATTAATTCA CTTATTCCTT CATTTTTCAC TTCCAGCATG TACAAAACCT TGGAGAGGTA CCGCAGCTGC
AACTACAACT CACAGGATGC AGCAGCTCCA GAAAACGAAG TAAGCATCCT CTTAGTTTCT TAATTAACAA TCTTTGACAA
ATCAATTACT TCTTACTAGC AGAACATATA TTATGATTTA TGAGTCAGTT ATTCGCTTAT AGTATTCTCT ACTCACTAAA
AAGGATTATG TTACCCTTTT TTTTCTTATG AGATGAAGGG TCGTGTTATC TTTGTTAATT TTTTGGGACA TTGATGTTAT
CCTTAATGTC GAATGCATAT ATAGGGTTTT CTCTAGCTTC ATGTTTTGCT CTGATATGTG CAGTGATGCT CATGCAAGTG
AAAATGAGCT GGGCTCTTAC CGTGCGTAGG TTAACAGGCC GGCCCATTAA TAGCTAACAG TTTAGATGGG CCGCAATGCT
AGATGCCGCG GGGGACGAAG GCCTTACATT CAATGGGCCG TAGGGCGAGA TACGGCCCAC GTCGGAGGTT GTGGGCCGTA
GGGCGCATTG TGACTTTGGG CCGAATATGC TTACTTAAAT TGGGCTTAGA ATTGTGAGAG GTTTCTGTTC GGATCCGAAG
AGATTGATGC CATGTTGTCT ATGTTAACAT TCCTCATGCA TAAGTAGGTT TAGCTGATAG TCTAAAACAG GAGTGAATTT
AGTAGACTTG GTTTGCAATT AGAATGCTAC ATGGTTTCCT GAATACTTTG TTGTGCCTAC AGTTTGTTAA CCATCTTTTT
TTTCCCCTTC GGCCAATATG GTCTGATATC TTGTAGCTTC AGGAGTCATG AGCTAATCCG TGTGTCTGCA ATTTTGTTGT
TTAAACCAGA TTAATTACCA AGAATACCTG AAGCTGAAAA CAAGAGTTGA ATTTCTTCAA ACCACACAGA GGTAGTCTTC
AGAGATGAAT GTGGCCAATC ATTTCAGCTT CTTATCTACT ACAGAGTTGC TATGTTCTTC CTGAGGGACA GAGTTTCTAT
GACTTACTAG CAAGCACTTC ACACCATGCA GAAATATTCT TGGTGAGGAT TTGGGCCCAC TAAGCATGAA GGAGCTGGAG
CAGCTTGAGA ACCAGATAGA AGTATCCCTC AAACAAATCA GGTCAAGAAA GGTAAAAATG TTTGTTCGCC ATGTTACCTA
TGCAAGCAAA TGGCACTTTT TGATATGCTC TTCTTAAACA CTGAACCTAG ATTAGATTAA TAATGAGCTT ATTATAATTT
TTTACTGCAA CTATCATGTA ATTCGGTACT TATTACCCCT CAACTGTATG GATTTGTTTA TGTGCATGGC TTTTAACACA
GGCTCAATAT TTCTGCAGAA CCAAGCACTG CTTGATCAGC TGTTTGATCT GAAGAGCAAG GTACTGAATA AATTCTGGTT
CTTTTCTTTT TTCCTCTGCA CCTAAATTAA ATCTGTGCAC ATATGACAAA CACTAAAATT GATTCTGCAG GAGCAACAGC
TGCAAGATCT CAACAAAGAC TTGAGGAAAA AGGTAACACA GCCATCGATC ACCCTGAAAG TCATTGCGTG CATCAGTATT
CGGACAACAT ACATCTTTTT CCTTGCTAAA GTCCCAACCA TGATCTTTTC ATGGCTGCTA AAATGTTTCA CGAAAGTTAC
AGTATTTGCA CGGAATAAAC CTTTTTCCCC GGTACGGCTT AAAAGTTAAT CAGCTTCTCA TACCGCTGAA GCGTTTGTTT
GTTCGTGCAG TTACAGGAAA CCAGTGCAGA GAATGTGCTC CATATGTCCT GGCAAGATGG TGGTGGGCAC AGCGGTTCTA
GCACTGTTCT TGCTGATCAG CCTCATCACC ATCAGGGTCT TCTCCACCCT CACCCAGATC AGGGTGACCA TTCCCTGCAG
ATTGGGTATT CTTCTTTTCT TCCAGTTACA GTTAATTTCT TGCCTGAAAA AATTCCCAAA ATGCAGAGGT CATGTTCTTT
TTAAACtatt cactaaatta ttaaacagag tatttgctca agttcgaaca atacactttc ttaaaagatg gtttgctatg
tattacttag accacttatc tcgatttact tgtatatttt attttttttc aaatatttaa tttataacta tataatcgag
tatatcgata atcctgacaa taattcgccc aataatctAG ATCAAATTGG GCCTAATTTT GTCTTTGTTA TTCAGTAATT
TAAAATTTAT GTATATATAC TCCATCGTTT TCATAGCTTT AATTTAATTT TTCCTTGGTG AAGGTATCAT CACCCTCATG
CTCACCATCA CCAGGCCTAC ATGGACCATC TGAGCAATGA AGCAGCAGAC ATGGTTGCTC ATCACCCCAA TGAACACATC
CCATCCGGCT GGATATGATG TGTGTGTTCA GTTCAGGCTT CAGGCTTCAG AGAAGCCAAT GCAAACAGTG TCCTGTAATC
CAGTAATTAC AGGGCATATG TAATGTAATG TAATGTAATC CCTGATCTAT ATTTTGCTAA GTACGTGCGT GCTCTCTTAC
GACCTTCTCC CCCAAACAGT TAATCAGGGG AATAATAATT TCGTTTGATG CACGTACTGT ATGTCTGTAT CTGTCACTGT
ATCGTAGGAC CGTCCATGTA TAACAATTTC CGTTTTGGAT GTGGTAACAA GTTAATTGGC ACTT