Locus
Os01g0217500
Description
ThiJ/PfpI domain containing protein.
RAP-DB Gene Symbol Synonym(s)
RAP-DB Gene Name Synonym(s)
CGSNL Gene Symbol
CGSNL Gene Name
Oryzabase Gene Symbol Synonym(s)
OsDJ-1A, DJ-1A
Oryzabase Gene Name Synonym(s)
DJ-1/PfpI domain containing protein A, DJ-1 protein A
Transcript Evidence
AK063270 (DDBJ, Best hit)
Protein Evidence
B8AAK4 (UniProt)
Literature
Note
Manual Curation
Functional domain (InterPro)
ThiJ/PfpI (IPR002818)
DJ-1 (IPR006287)
Full-length cDNA
001-113-B10 (Online Clone Ordering)
Expression Databases
TENOR (Os01t0217500-01)
RiceXPro (AK063270)
Others
Oryzabase (20912)
KEGG (Os01t0217500-01)
Transcript |
1474 bp |
>Os01t0217500-01 ThiJ/PfpI domain containing protein. AGCTCGTTCAATGCGCCCGGTGTCTCCTCCTCCCAACTACACACCCCCGCAATCTCGCTC GCTAGCTCGCTGATCGATCAAGCTCAAGCTCAAGCTAGCTTCGGTCGTCGGCAATGGCGG CGCAGGCGTCTCCTCCAACGAAGAAGGTGTTGGTGCCGATCGTCGCCGGCACGGAGCCGG TGGAGGCGGCGGTGCCCATCGACGTCCTCCGCCGCGCCGGCGCGGACGTCACCGTGGCTT CCGCCGATGATGGCGAGCTGGTCGTCGAGGTCATGTACGGCGTCAGGATCGTCGCGGACG CGCTCGTCGCCGGCGGCGACTGCGCCGCCGCTCACTTCGACCTCATCGTCCTCCCGGGAG GGGTTCCAGGCGCGGCGAACCTCGGCGGCTGCGCGGCGCTGGAAGCCATGGTGAGGAGGC ACGCGGCGACCGGAGGTCTCTACGCCGCCATCTGCGCCGCGCCGCCGCTGGCGCTGGCGT CCTGGGGCATGCTCAACGGCCTCAAGGCAACTGCTCATCCGCTGTTCGTGGACAAGTTCC CACCGGAGGTGGCCGCCGTGGATGCGAGCGTGGTGGTGGACGCGAGCGCCGTCACGAGCC GTGGCCCGGCGACGTCGACGGAGTTCGCTCTCGCTCTGGTAGAGCAACTCTACAGCAAGA ACAAGGCCGAGCAGATCGCAAAAGAAATGCTTGTCAGATACGATGCTGGGTATACCATCG ATGAAGTCAACTCGGTTCAATGGAAATGTAACGGCACGCCCAAGGTCCTTGTTCCAGTAG CCAATGGCACCGAGGAGATGGAGCTGATAACAATCATCGACGTCCTGCGCAGAGCCGACG CGGACGTCGTCGTTGCGTCGGCGGAAAACGCCGGCGTCGAGATCGTCGCGCGCCACGGGA TGAGGATCGTGGCTGACACGACGCTGGACGAGGCGGCTGCCGATGATCAGACGAGCAGCT TCGACCTGATCATCCTACCGGGTGGCACGCCTGGCGCGAAGACGATGAGCAGCAACGAGA AGCTTGTCACTCTACTGAAGAAGCAGGCGGCGGCGAGCAAGCCCTACGGCGCCATTGGCG CCGCGACGGCTCATGTGCTCGAGCCCCACGGTCTGCTCGAGGGCAAGAAAGCGGCGGATC AGGATGGCGGCGACGAGTGCGAGAGCAGAGTGGTGGTTGATGGGAACGTGATCACGAGCG GAGGCACCGGCACCGCCATGGAGTTCGCCGTGGCCGCCGTCGAGAAGCTGCTCGGCCGCG ACGTGGCGCAGAGGGTTGCGGAAGGCTTGCTTTTTGCCTGATCGATCTTCTGTTGGTTTT AGGTGATCAAACCAATGAAAGTTTTCATAATGCAGATGTGTGATCTGTGAAAGAGATAAT TTTCCTTCCAAGAAAAAGACATAAAGAGTTGTCATTTGTCAAACCATCAACATTTGTTCT CCCATAAACTTATAAGGGTGTTTTCTTAATTTAT
CDS |
1188 bp |
>Os01t0217500-01 ThiJ/PfpI domain containing protein. ATGGCGGCGCAGGCGTCTCCTCCAACGAAGAAGGTGTTGGTGCCGATCGTCGCCGGCACG GAGCCGGTGGAGGCGGCGGTGCCCATCGACGTCCTCCGCCGCGCCGGCGCGGACGTCACC GTGGCTTCCGCCGATGATGGCGAGCTGGTCGTCGAGGTCATGTACGGCGTCAGGATCGTC GCGGACGCGCTCGTCGCCGGCGGCGACTGCGCCGCCGCTCACTTCGACCTCATCGTCCTC CCGGGAGGGGTTCCAGGCGCGGCGAACCTCGGCGGCTGCGCGGCGCTGGAAGCCATGGTG AGGAGGCACGCGGCGACCGGAGGTCTCTACGCCGCCATCTGCGCCGCGCCGCCGCTGGCG CTGGCGTCCTGGGGCATGCTCAACGGCCTCAAGGCAACTGCTCATCCGCTGTTCGTGGAC AAGTTCCCACCGGAGGTGGCCGCCGTGGATGCGAGCGTGGTGGTGGACGCGAGCGCCGTC ACGAGCCGTGGCCCGGCGACGTCGACGGAGTTCGCTCTCGCTCTGGTAGAGCAACTCTAC AGCAAGAACAAGGCCGAGCAGATCGCAAAAGAAATGCTTGTCAGATACGATGCTGGGTAT ACCATCGATGAAGTCAACTCGGTTCAATGGAAATGTAACGGCACGCCCAAGGTCCTTGTT CCAGTAGCCAATGGCACCGAGGAGATGGAGCTGATAACAATCATCGACGTCCTGCGCAGA GCCGACGCGGACGTCGTCGTTGCGTCGGCGGAAAACGCCGGCGTCGAGATCGTCGCGCGC CACGGGATGAGGATCGTGGCTGACACGACGCTGGACGAGGCGGCTGCCGATGATCAGACG AGCAGCTTCGACCTGATCATCCTACCGGGTGGCACGCCTGGCGCGAAGACGATGAGCAGC AACGAGAAGCTTGTCACTCTACTGAAGAAGCAGGCGGCGGCGAGCAAGCCCTACGGCGCC ATTGGCGCCGCGACGGCTCATGTGCTCGAGCCCCACGGTCTGCTCGAGGGCAAGAAAGCG GCGGATCAGGATGGCGGCGACGAGTGCGAGAGCAGAGTGGTGGTTGATGGGAACGTGATC ACGAGCGGAGGCACCGGCACCGCCATGGAGTTCGCCGTGGCCGCCGTCGAGAAGCTGCTC GGCCGCGACGTGGCGCAGAGGGTTGCGGAAGGCTTGCTTTTTGCCTGA
Protein |
395 aa |
>Os01t0217500-01 ThiJ/PfpI domain containing protein. MAAQASPPTKKVLVPIVAGTEPVEAAVPIDVLRRAGADVTVASADDGELVVEVMYGVRIV ADALVAGGDCAAAHFDLIVLPGGVPGAANLGGCAALEAMVRRHAATGGLYAAICAAPPLA LASWGMLNGLKATAHPLFVDKFPPEVAAVDASVVVDASAVTSRGPATSTEFALALVEQLY SKNKAEQIAKEMLVRYDAGYTIDEVNSVQWKCNGTPKVLVPVANGTEEMELITIIDVLRR ADADVVVASAENAGVEIVARHGMRIVADTTLDEAAADDQTSSFDLIILPGGTPGAKTMSS NEKLVTLLKKQAAASKPYGAIGAATAHVLEPHGLLEGKKAADQDGGDECESRVVVDGNVI TSGGTGTAMEFAVAAVEKLLGRDVAQRVAEGLLFA*
5'UTR
chr01:6412786..6412898 (+ strand) : 113 bp
CDS
chr01:6412899..6412931 (+ strand) : 33 bp
chr01:6413001..6413210 (+ strand) : 210 bp
chr01:6413302..6413451 (+ strand) : 150 bp
chr01:6414787..6414969 (+ strand) : 183 bp
chr01:6418705..6418779 (+ strand) : 75 bp
chr01:6418959..6419173 (+ strand) : 215 bp
chr01:6419277..6419418 (+ strand) : 142 bp
chr01:6419515..6419694 (+ strand) : 180 bp
3'UTR
chr01:6419695..6419867 (+ strand) : 173 bp
FASTA
>Os01t0217500-01 class=Sequence position=chr01:6412786..6419867 (+ strand) AGCTCGTTCA ATGCGCCCGG TGTCTCCTCC TCCCAACTAC ACACCCCCGC AATCTCGCTC GCTAGCTCGC TGATCGATCA AGCTCAAGCT CAAGCTAGCT TCGGTCGTCG GCAATGGCGG CGCAGGCGTC TCCTCCAACG AAGAAGGTAA CATATGATGA TTATAGTGTG TGCATGTTCG CGCGGAGTGT TTGATTCGAT CGTACGCGTG TGCAGGTGTT GGTGCCGATC GTCGCCGGCA CGGAGCCGGT GGAGGCGGCG GTGCCCATCG ACGTCCTCCG CCGCGCCGGC GCGGACGTCA CCGTGGCTTC CGCCGATGAT GGCGAGCTGG TCGTCGAGGT CATGTACGGC GTCAGGATCG TCGCGGACGC GCTCGTCGCC GGCGGCGACT GCGCCGCCGC TCACTTCGAC CTCATCGTCC TCCCGGTACG TACAATATAT TGCGGCCAAT GGCGACACCG ATGGATGCGG CATGGAAGAA GCTCATCTTG AATTCTGCGA GATATGCCGC GCGCAGGGAG GGGTTCCAGG CGCGGCGAAC CTCGGCGGCT GCGCGGCGCT GGAAGCCATG GTGAGGAGGC ACGCGGCGAC CGGAGGTCTC TACGCCGCCA TCTGCGCCGC GCCGCCGCTG GCGCTGGCGT CCTGGGGCAT GCTCAACGGC CTCAAGGTTG CTAAAGCTAG CAAGTGGTCA CTCCAGTCCA CTGCTCACTA TTGCTATTCT CCACTATCAC AATTCACTGC TTAATTTCCA GCTGGTTTTT TTTTTCTAAA ATTAtactcc ctccatttta aaatgtttga caccgttgac tttttagtac gtgtttgacc attcgtctta ttcaaaaaat ttaactaatt atttattctt ttcatatcat tcgatttatt gttaaatata cttttatgta cacatatagt tttacatatt tcacaaaaaa aaatttgaat aagacgaacg gtcaaacata tgttaaaaag tcaacggtgt caaacatttt gaaacggagg gagtaCATAG GTACTTGAGA TATACTCCAT CCGTTTCAGG ATATAAGACG TTTTAACttt ggtcaaagtc aatctgcttt aagtttgatc aagtttgtag aaaaaagtag tagcattttc aacctaagat aaatttatta tgaaaatata ttcaattatt gattcaatga aactaattta atattataaa tagtattata tttatctata agcttagtta aatttaaaac agtttaactt tgatTAAAGT CAAAACGTCT TATAAACTGG AACGGAGGGA TAAGTATTTA CCACAAAACA CATGTTTAAC AGACGACCTC AAAGAAACGA AGGGTGTCGG TAAATACCTA ATCTCACTAA ATCATGTCCA TAATTTAAAA CACATGTGTA CGTTTTGACA TGGAGTATTT TTTAAGAAAC CGTATACTTA CATAAAATAC TTCACCGATT GATTTACATG TATTCAATTA GATAAAAAAT GGTTATGGAA CCAAGTAACA AATTAATGTT TGTTCAAAAG ATTAAAAATA CCACATAGTG GAACATTTTG CCATTATCTA GAAAAATAGA ACATTTTGCC ATAAAAGGAT TCCTCAAAAT AAATTATAAT AAACGGTGTT TGCGTTTTCC TCATTTTATA TATGAAATTT ACTCTACAGA GAGAGAAGGC ACCAAAACTG TGGTGCAAAA AGGTTTgggg catttgcaaa tttgccaccg gtttttaatt ttgcaacgat gccactcgaa tgatagttct agtgatattt ttataatttt ttagtggcag tcttgcaata acgattcaaa acagtggtaa aacagtggta agtttgcaat tgGCTCAAAG GTTTTAAAGT TGAGCTATGA TGGTGTACGC ACCTACACTC CCAGTAAGCT AATTTTGAAA TACACAAAAT TAACCACAAA TCGTTAATTT ATTAATCATG ATTCATAACC GTCAAATATG ATATGTCTTT GCATGATGAA GGCAACTGCT CATCCGCTGT TCGTGGACAA GTTCCCACCG GAGGTGGCCG CCGTGGATGC GAGCGTGGTG GTGGACGCGA GCGCCGTCAC GAGCCGTGGC CCGGCGACGT CGACGGAGTT CGCTCTCGCT CTGGTAGAGC AACTCTACAG CAAGAACAAG GCCGAGCAGA TCGCAAAAGA AATGGTAATT AATTATATAT ATGGTTCTAC TAACTTTGGC ACTTGATTAA TAGCTACCTA ACTCCGTCTT AGAGTATAGC ACTTAAAGAT CGGATGTCTC ATCCAATTTT AAACTGTTAG ATTGCTATAT ATTCTAGCAC GGAGGTAGTA AAATTTCTCT CATTGGATCT TACCCATTGT TACTCTTGTT GATTTTTTTT TACCATGGCA AGACCTGTCC ATTAATTGTA AAGATTTTGA AAAATGTTTT TGTTTGAATT TTTATTTTTA AAGTAAGATT GGTTAGGCTG CTAGCtactt ccttcatctt gcagtatcag gcttgtaagc atcttgatat tcaactttta aaattattga ccaacaataa tcagtctaat aaaagtcaaa ttttatttga tgagaataat ataattggat tgacatttaa atcccctttc ctactatagt tgtagaatat gataaactaa aagttaaaga ttagttttat aaaccaagct aaatttgacc gcgtattatt tggtgggaAA ATGGTGTGGT ACCTCCTATT TTTAATATAT GATACTATTt tcttttttga aaaaaaattg accaacaata tttatttatt tagatctctg atcaaaagta ctttgagcat ggctagtatg tttgcctatt tacataaata tttaaaagaa aataatagcc aaacgaatta gAATAATCAT TTTAAAAGAC AGGTATTTTT AGTTTACTAT CAAATGGGTG CTAACATTTT CGACAAAGTT GTGTTTGGTA TGTTACCTGA AGTAGTAAAC GACCATGGTC CATGGACTAT GCCAAACTTA ACTAAATTAC ATAATCTGGT AATCTATATA TTTATATAAG CAAGTATATA TACTCTCTAT ATATAGGTGG ACCAAATAGA CTATAATTAA GCTTTTTTTT AAGAGTATAT GGAGTACATC TGCCCATGTA CGTCTATATT CATTATTAGT TTTTTTTAGA AGAAATGAAC TCGAGAAATA TAGGATActc ccttcttgta aaggaggtcg ttttggacag cgacacggtc tccaaaacat aattttgact tcttatttct ataaaaatat ttattgacaa gtgatatata tgtatacttt tcaagacaaa tctattcata taatttttac attttcaaac ttaacaactt aagagttatt catgatttat aCATCTGCCC ATGTACGTAT tgtcggagat atgggcccgg ggatatgcga agtgagggga gtttaccttc ccatcctgtc gcgtgaccct acagcctggt cctacccccg caccccgcga atcgcaggag cggcccgagg ggcctcgggg tgccacgtca tgccccttgg gccctcgcgt cgctttgccc cgaggccctc gcccggctgc catctagcgg ggggagcaag cggggagggg gcccaggctg aaccgccttt aatgcgcaca acgccccaac tgccccttgc gggcagacgt gcggcgtgcc cgactggcgt gcgtcagtca agaatgaccg gtccgtgacc agcctgtcgc cggtcacgtc tgactggacg gacggccgtg cccccacgtc gcatctgtct ccggcagagt ggaggtaggt atgacccgtc ccatcggagg gtcattcgga gctctctcca cgagagagcg gccaccacaa gtcttcaccc attaatgagg gaatgacagg gctgcccccc gtgtcaggcg ggggacggcg ctggccccac tcaagaacga gctgtggctt agcttccagg cgaaggcacg agtcgagatc cggtcaaggt agggtgggtc cccacccggt agaagagtag gtagaggcgg tgcatgtggt atccccttga gctataaaag gaggaccttg cctaccgaga aaagggggac gactctcaga aaacctgggc tctaggagaa gaggaccgag aacgctctcc ggagtttagg aacctttgta actcttaccc tgaatcccac acacaggagt agggtattac acttcatagc ggcccgaacc tgtataatct tgtcgtgtac acgctgccta gcagccttca gggcggatac gtgatttcta gagacgagct ctttcccccg gccgaactca caaaagggga tcccacgatc tcccgctaga gaggtttacA TGATTAGTTT TTTTAGAAGA AATGAACTCG AGAAATATAG GATActccct tcgtacttgt aaaggaagtc gttttggaca gcgacacggt ctccaaaaca caattttgac ttcttgtttc tataaaaata tttattgaca agtgatatat gtatactttt caagacaaat ctattcatat aatttttaca ttttcaaact taacaactta agagttatta atgatttata tttccaaggt ttgacttaaa cattattcta aacaactttt tttacaagta cggaaggagT AATTAGGACA CAGTTCCTCG TTTCCAGGAA TGGGTGGCAT AATTTATGAG GAAATGGACG GTACATTGCG GCGGTCTAAT AATTGTCTAA CGTTGTATTG AATGTTCACT TCACATGTGC CGTTGTCAGC TCAAAATCGG TTGTGGAAAG TCAGGGCAGG AATTTATTGT CTAGATAAGC CCCCATGGCC TCATGGTCAT ATGGGCCATA TGCCGATAGC TGTTGATACT TGATAGTATG ATGGTGTGTG TTGACTGCTG CTATGGTCAT GGGGCCAAAT GTTTCTGAAA TGCAGTCAGA GAACTTCATG AGCACTAGAA CGGAATATAC TGAAAATAAA TACTCCATAT TTTCCCACCT ACTCCATATA ATACTTATTG GGTTGAAATA AAATTCTATA TGGTCATACT TGGATAATAT GTCATACTAA TTTGTATAGT ATTTGCGATT TCGTTGCTAA AAAAACCATA GGCGATCCCT GATGTGCTCT CTTTTTTTAA AAAAAAATCA TTGCTAAAAT AAGTGTGGTT AAATTTTAAA TGTGAATATA GTAGTTGGAT TATTTGAGAT CTTCTTTTTT TTTTAGAAAA TAGATTAAAA CCTGGCCTCT ATATCTAACA CAGATGTACG CAGCTAAGGT GGATTATTTG TGAATGAAAC ATACATGACA AAGTTCTGCA ATTGCTCTCT TCAAACCCTA AACTCGTGCT AATAGTTCAT TAAGAAATGt actcccccat cccaaaatat aagaatctag aaccggataa gacatttTTT TTATATTTTG GGATGAAGAT AGTATACATT AATCTTAAAA GTAGTCAGTG TACCAAGCCA GTCTACTTGA TTTGACTATG ATAGGACTTT TGGAGAGTGT AGTAGTACTT ATATAAGAGA AATTTTACGG TCGTTGAGAA GGTACCGATA GTGTAAATTT TCATAAATTA ATTAACATTG GAAAATGTTA TTGTAATATA TTGTGGAGCA TTCTTTTAAA CAAAGAAAGT CCATAATACA AGTGTTGACA AATAGGTGGA CCAGAAATTA ATCAACAAAG TTACCTTGTC CACGGTCCCA CCCATCAACT ACCTAGGACT AGGAAGCTGG CATTTGTAAG CATGGCAGAT TTGAGCTCTG CTCCTTGACT CATCACTTTA TGAACAGCAA ATCATCCCCC CCCCCCCCCC CCCGCTTTTG TTGTTTTTAC TGTCATAGCT TGATCAACAT ATGAGTTAAC TCCCTATATC TTGTGCCTCA AATTGTCAGC TTGTCAGATA CGATGCTGGG TATACCATCG ATGAAGTCAA CTCGGTTCAA TGGAAATGTA ACGGCACGCC CAAGGTACAT ATACAAGAGA TGAAACCTAA ACACTTATCT TAACACTAGC TAGCATTTCA TACCTCATAA GTGATCGATG GAGCTCTTCC AAATCACCAT GGAGAGAAAA AAAAAAGGAT AGCATTTCTT ATACAATATA AAAGCCAGAA CTTCTCTGAA AATTTGCCTC TGTTTTGTGT CAGGTCCTTG TTCCAGTAGC CAATGGCACC GAGGAGATGG AGCTGATAAC AATCATCGAC GTCCTGCGCA GAGCCGACGC GGACGTCGTC GTTGCGTCGG CGGAAAACGC CGGCGTCGAG ATCGTCGCGC GCCACGGGAT GAGGATCGTG GCTGACACGA CGCTGGACGA GGCGGCTGCC GATGATCAGA CGAGCAGCTT CGACCTGATC ATCCTACCGG CAAGCAGCAT ACACGAACTC TCGCTGTCCA AACCCATTTT GATCTGAACA TGTTCAGATC ACTGAACGTC TGAACACTTT CTCTCCTCGT CTCAAACAAC AGGGTGGCAC GCCTGGCGCG AAGACGATGA GCAGCAACGA GAAGCTTGTC ACTCTACTGA AGAAGCAGGC GGCGGCGAGC AAGCCCTACG GCGCCATTGG CGCCGCGACG GCTCATGTGC TCGAGCCCCA CGGTCTGCTC GAGGTAAATT AAAGAACATT AGACAAGATC GCTTGCTTTT GATCAGTGAT ATTCTGTCGA GACCTGACAC ACATCGAGCG GCCGCGCGAT TGATTTCAGG GCAAGAAAGC GGCGGATCAG GATGGCGGCG ACGAGTGCGA GAGCAGAGTG GTGGTTGATG GGAACGTGAT CACGAGCGGA GGCACCGGCA CCGCCATGGA GTTCGCCGTG GCCGCCGTCG AGAAGCTGCT CGGCCGCGAC GTGGCGCAGA GGGTTGCGGA AGGCTTGCTT TTTGCCTGAT CGATCTTCTG TTGGTTTTAG GTGATCAAAC CAATGAAAGT TTTCATAATG CAGATGTGTG ATCTGTGAAA GAGATAATTT TCCTTCCAAG AAAAAGACAT AAAGAGTTGT CATTTGTCAA ACCATCAACA TTTGTTCTCC CATAAACTTA TAAGGGTGTT TTCTTAATTT AT
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