Locus
Os01g0217800
Description
ThiJ/PfpI domain containing protein.
RAP-DB Gene Symbol Synonym(s)
RAP-DB Gene Name Synonym(s)
CGSNL Gene Symbol
CGSNL Gene Name
Oryzabase Gene Symbol Synonym(s)
OsDJ-1B, DJ-1B
Oryzabase Gene Name Synonym(s)
DJ-1/PfpI domain containing protein B, DJ-1 protein B
Transcript Evidence
AK100463 (DDBJ, Best hit)
Protein Evidence
B6TVM7 (UniProt)
Literature
Note
Manual Curation
Functional domain (InterPro)
ThiJ/PfpI (IPR002818)
DJ-1 (IPR006287)
Full-length cDNA
J023092A20 (Online Clone Ordering)
Expression Databases
TENOR (Os01t0217800-01)
RiceXPro (AK100463)
Others
Oryzabase (20913)
KEGG (Os01t0217800-01)
Transcript |
1723 bp |
>Os01t0217800-01 ThiJ/PfpI domain containing protein. AGTAGTACAGCGCACAGGCCACGCGTGCGCGTCCACCGAAACAGCGGCGGCGACGACGAG GCGATCGATTCCTGGACACTCGCGCCACGCCACCCCACTGTCCCTGCACGCTGCAGCTAC CCCTACTCTACCACTGCCCTCTCCGGCAGGGAAGCGAGGAAGAGGCACGCACCACGAAGT CGCCACCTCGATTTTTCCGGCGAACGACGCAAGAATAACACCCCCCCCCCCCTTACCTAC GGGGATAGTGATACGATGGCGATGGCGGCCGCTTCCGCCTCCGCCATGGCGAGGCGGGCC GCTTCGTGGCCACGGCTCCTCCTCCTCTCCCGCGCCTTCGCCGCCGCCGCCGCTGAGCCG AAGCGGGTGCTCGTGCCGGTCGCGGACGGCACGGAGCCGGTGGAGGCGGCCGCCACCGCC GACGTGCTCAACCGCGCCGGCGCGCGGGTCACCGTCGCCACGGCTGACCCCGCGGGCGAC GACCGTGGCCTCCTGGTGGAGGCCGCGTTCGGGGTCAAGCTCGTCGCCGACGGCCGCGTC GCCGACCTGGAAGGCGAGGCCTTTGACCTCATCGCCCTACCCGGAGGAATGCCGGGATCA GCTAACCTCAGAGATTGCAAGGTGCTGGAGAAGATGGTCAAGAAGCAGGCAGAGCAGGGT GGCCTCTACGCCGCCATCTGCGCCACGCCGGCGGTGACGCTGGCTCACTGGGGCTTGCTC AAAGGCTTAAAGGCGACTTGCTATCCATCATTCATGGAGAAGTTCACCGCTGAAATTATC CCTGTGAACTCTAGGGTGGTGGTAGATAGAAATGCAGTGACCAGCCAAGGGCCAGCAACA GCAATTGAATATGCTCTCGCTTTGGTGGAGCAACTGTACGGCAAAGAGAAGTCGGAGGAG GTTGCAGGACCCTTGTATGTTCGTCCTCAACCTGGGGTTGACTATGTCATAGATGAGTTC AATTCAGTTGAGTGGAAATGCAGTGGTACACCTCAGGTTCTTGTGCCAGTTGCTAATGGT TCGGAGGAAATGGAAGCTCTTAATTTAATAGATATCTTGCGTAGAGCAGGAGCAAATGTT ACTGTTGCATCAGTTGAGGATAAGTTGCAAGTTGTGACCCGCCGCCACAAATTTAACCTG ATAGCTGATATTATGGTGGAAGAAGCTGCCAAAAGGGAATTCGATCTGATTGTCATGCCG GGTGGTCTGCCAGGTGCTCAAAAGCTTTCTAGTACAAAGGTACTTGTAGATTTACTAAAG AAACAGGCAGAATCTAATAAACCATATGGTGCAATATGCGCTTCTCCTGCTTATGTTCTC GAGCCCCATGGTTTACTGAAGGGGAAGAAGGCAACATCATTTCCACCAATGGCACACCTG CTTACTGATCAGAGTGCATGTGACAGTAGGGTGGTTGTTGATGGTAACCTTATCACTAGC AAAGCCCCAGGCTCCGCGACAGAGTTCGCGCTAGCCATTGTTGAGAAGCTGTTTGGTCGA GAGAAAGCGGTCAGTATAGCGAAGGAGTTGATTTTTATGTGATTATACACTTGGGCATTT ATGCATCAGGTGCCTGTCACCTGTGAGTGATGCTTCTGTGAATAACTACTTATGCTGCTT TCCTAGGAATGCATAATATAAGCCTATAGCAGCATGTGGCAATCCATGTGAATGAGGAAT AAATGTACATTATGAGTATCATGTGTAAAGAGTCGTCGTTGTT
CDS |
1287 bp |
>Os01t0217800-01 ThiJ/PfpI domain containing protein. ATGGCGATGGCGGCCGCTTCCGCCTCCGCCATGGCGAGGCGGGCCGCTTCGTGGCCACGG CTCCTCCTCCTCTCCCGCGCCTTCGCCGCCGCCGCCGCTGAGCCGAAGCGGGTGCTCGTG CCGGTCGCGGACGGCACGGAGCCGGTGGAGGCGGCCGCCACCGCCGACGTGCTCAACCGC GCCGGCGCGCGGGTCACCGTCGCCACGGCTGACCCCGCGGGCGACGACCGTGGCCTCCTG GTGGAGGCCGCGTTCGGGGTCAAGCTCGTCGCCGACGGCCGCGTCGCCGACCTGGAAGGC GAGGCCTTTGACCTCATCGCCCTACCCGGAGGAATGCCGGGATCAGCTAACCTCAGAGAT TGCAAGGTGCTGGAGAAGATGGTCAAGAAGCAGGCAGAGCAGGGTGGCCTCTACGCCGCC ATCTGCGCCACGCCGGCGGTGACGCTGGCTCACTGGGGCTTGCTCAAAGGCTTAAAGGCG ACTTGCTATCCATCATTCATGGAGAAGTTCACCGCTGAAATTATCCCTGTGAACTCTAGG GTGGTGGTAGATAGAAATGCAGTGACCAGCCAAGGGCCAGCAACAGCAATTGAATATGCT CTCGCTTTGGTGGAGCAACTGTACGGCAAAGAGAAGTCGGAGGAGGTTGCAGGACCCTTG TATGTTCGTCCTCAACCTGGGGTTGACTATGTCATAGATGAGTTCAATTCAGTTGAGTGG AAATGCAGTGGTACACCTCAGGTTCTTGTGCCAGTTGCTAATGGTTCGGAGGAAATGGAA GCTCTTAATTTAATAGATATCTTGCGTAGAGCAGGAGCAAATGTTACTGTTGCATCAGTT GAGGATAAGTTGCAAGTTGTGACCCGCCGCCACAAATTTAACCTGATAGCTGATATTATG GTGGAAGAAGCTGCCAAAAGGGAATTCGATCTGATTGTCATGCCGGGTGGTCTGCCAGGT GCTCAAAAGCTTTCTAGTACAAAGGTACTTGTAGATTTACTAAAGAAACAGGCAGAATCT AATAAACCATATGGTGCAATATGCGCTTCTCCTGCTTATGTTCTCGAGCCCCATGGTTTA CTGAAGGGGAAGAAGGCAACATCATTTCCACCAATGGCACACCTGCTTACTGATCAGAGT GCATGTGACAGTAGGGTGGTTGTTGATGGTAACCTTATCACTAGCAAAGCCCCAGGCTCC GCGACAGAGTTCGCGCTAGCCATTGTTGAGAAGCTGTTTGGTCGAGAGAAAGCGGTCAGT ATAGCGAAGGAGTTGATTTTTATGTGA
Protein |
428 aa |
>Os01t0217800-01 ThiJ/PfpI domain containing protein. MAMAAASASAMARRAASWPRLLLLSRAFAAAAAEPKRVLVPVADGTEPVEAAATADVLNR AGARVTVATADPAGDDRGLLVEAAFGVKLVADGRVADLEGEAFDLIALPGGMPGSANLRD CKVLEKMVKKQAEQGGLYAAICATPAVTLAHWGLLKGLKATCYPSFMEKFTAEIIPVNSR VVVDRNAVTSQGPATAIEYALALVEQLYGKEKSEEVAGPLYVRPQPGVDYVIDEFNSVEW KCSGTPQVLVPVANGSEEMEALNLIDILRRAGANVTVASVEDKLQVVTRRHKFNLIADIM VEEAAKREFDLIVMPGGLPGAQKLSSTKVLVDLLKKQAESNKPYGAICASPAYVLEPHGL LKGKKATSFPPMAHLLTDQSACDSRVVVDGNLITSKAPGSATEFALAIVEKLFGREKAVS IAKELIFM*
5'UTR
chr01:6432336..6432590 (+ strand) : 255 bp
CDS
chr01:6432591..6432917 (+ strand) : 327 bp
chr01:6433356..6433505 (+ strand) : 150 bp
chr01:6433614..6433796 (+ strand) : 183 bp
chr01:6434305..6434385 (+ strand) : 81 bp
chr01:6434646..6434849 (+ strand) : 204 bp
chr01:6434933..6435073 (+ strand) : 141 bp
chr01:6435270..6435470 (+ strand) : 201 bp
3'UTR
chr01:6435471..6435651 (+ strand) : 181 bp
FASTA
>Os01t0217800-01 class=Sequence position=chr01:6432336..6435651 (+ strand) AGTAGTACAG CGCACAGGCC ACGCGTGCGC GTCCACCGAA ACAGCGGCGG CGACGACGAG GCGATCGATT CCTGGACACT CGCGCCACGC CACCCCACTG TCCCTGCACG CTGCAGCTAC CCCTACTCTA CCACTGCCCT CTCCGGCAGG GAAGCGAGGA AGAGGCACGC ACCACGAAGT CGCCACCTCG ATTTTTCCGG CGAACGACGC AAGAATAACA CCCCCCCCCC CCTTACCTAC GGGGATAGTG ATACGATGGC GATGGCGGCC GCTTCCGCCT CCGCCATGGC GAGGCGGGCC GCTTCGTGGC CACGGCTCCT CCTCCTCTCC CGCGCCTTCG CCGCCGCCGC CGCTGAGCCG AAGCGGGTGC TCGTGCCGGT CGCGGACGGC ACGGAGCCGG TGGAGGCGGC CGCCACCGCC GACGTGCTCA ACCGCGCCGG CGCGCGGGTC ACCGTCGCCA CGGCTGACCC CGCGGGCGAC GACCGTGGCC TCCTGGTGGA GGCCGCGTTC GGGGTCAAGC TCGTCGCCGA CGGCCGCGTC GCCGACCTGG AAGGCGAGGC CTTTGACCTC ATCGCCCTAC CCGTGCGTCC ACCCTTTACT CCTAAAATTA CTTCCTTTTT TTTCTCCCCC TTAACAACTA CTCCCTCCGT TGctccctcc gtttcatatt actagtcgat ttaacttttg caaacatttt taagtttgac caaatttata gaaaaatata acaatacgaa gcaaacgtat tatgaaaata tatttaacat tacatttaat tgaactaatc tagtgttcca gatattgcta aatttttcat taaatttggt caaacataaa gaaatttgac gaagaaaaaa aaaggtcaaa gtgacttata atatgaaatg gagggagtaC TAATTCTGCT TTACTGTGCC ATTGATTCGC GCTCTGTGAG GATGTTCTTG CTTAATAAGA GAGAACTTGT ATGGACTAGC AAAAGTGTGA CAATTCAGTG ATGCTGGTTA CTTGGTGTAG GGAGGAATGC CGGGATCAGC TAACCTCAGA GATTGCAAGG TGCTGGAGAA GATGGTCAAG AAGCAGGCAG AGCAGGGTGG CCTCTACGCC GCCATCTGCG CCACGCCGGC GGTGACGCTG GCTCACTGGG GCTTGCTCAA AGGCTTAAAG GTTGCAACAT GGATCATCAT TCAGTCAGGG TCAATTCACT GTTGCGGGGG TGGTTTTGTT GGAAATATGT ATCATGTTGA GAGACAGATA TGATTTTTGT TATTTCAGGC GACTTGCTAT CCATCATTCA TGGAGAAGTT CACCGCTGAA ATTATCCCTG TGAACTCTAG GGTGGTGGTA GATAGAAATG CAGTGACCAG CCAAGGGCCA GCAACAGCAA TTGAATATGC TCTCGCTTTG GTGGAGCAAC TGTACGGCAA AGAGAAGTCG GAGGAGGTTG CAGGACCCTT GGTAAGCTAT ATAGCCTGTA AGCCATCACA TACTTGTTTT TTTTTACTTC TATCTGCTAT GTTAGGTGAT ATGATATTAT TACCAGGCGA TGATCTCAAA GAGATGTTTA TGGGCTGTTG GATTTTCCTA AAATTCTGCC TGCAGTGATT CAATCAATTA TCTGAGTGAT TTATGGTTTC TAACTAGTTG ACATAATTAT AATCATACTG AAATTTAGAG TAAGGCAATA TGTCGCAATC TTTTAGGACA TTtttttttc cgaacgcgca aaaggattgc acgtcaatat attagcagga aaagagtttt tGTTACACAT TTAGGACATT TAATTGTTAC TGTAATCTCT CCCTTCAAAT CTTAATACAA ATGATACGCA ATGCTTATGC GTGTTCCCTA AAAAAAGTTA CTTTTGCTGA GTTCACTCGA ATTGTTTTCG TGCATATTGT ATCAACATCA GCTGCTTAAA TTAACATTGC CTAATGATTG TGTGGTTCTT CTAATTCAGT ATGTTCGTCC TCAACCTGGG GTTGACTATG TCATAGATGA GTTCAATTCA GTTGAGTGGA AATGCAGTGG TACACCTCAG GTATGAAATA AAATTGAATC CTTTTGTTAA AAAATGCCTC CTTATATACA TTTTTAAGGT TGCATGAATA GGTTCTTGTC CCATGGCACA GGTCTTCGCC TGCTTAAAAA TGTTTTAGCT GTTGCTATGA AATTCTGTCA TTTTTTTTTC GCCGGGCTGC AGGAAGGAAT CCCTGGTCAG GGTTTATTAA GTAAGCATAA GGTGTGATTT ACATGACTCA ACAACCATGC TAGCACTTCC CTTTTTTGGG TCTTCTGCAG GTTCTTGTGC CAGTTGCTAA TGGTTCGGAG GAAATGGAAG CTCTTAATTT AATAGATATC TTGCGTAGAG CAGGAGCAAA TGTTACTGTT GCATCAGTTG AGGATAAGTT GCAAGTTGTG ACCCGCCGCC ACAAATTTAA CCTGATAGCT GATATTATGG TGGAAGAAGC TGCCAAAAGG GAATTCGATC TGATTGTCAT GCCGGTACAT TCCATAGCTA GAGTTACTTT TTGATTGATC TGGTGTTGAT CTTTTGAATA CTTCGCTGAT ACTGGTGTCA TATATAGGGT GGTCTGCCAG GTGCTCAAAA GCTTTCTAGT ACAAAGGTAC TTGTAGATTT ACTAAAGAAA CAGGCAGAAT CTAATAAACC ATATGGTGCA ATATGCGCTT CTCCTGCTTA TGTTCTCGAG CCCCATGGTT TACTGAAGGT ATTCCCCTTT ATATGTGCAT GAGTGTTAAT CCCTCTCGGT AGTCAGCTCT TTTTTTTTTG GAACAAATTC AGTAGTCAGC TCCATAGGCA TATAAATGAT TATTCCTCAA AGTAGCAGAT TAACCATCAA GCTGTATTTC CTTTTGAAAA AAAACTGTCA AGCTGTATTA ACATAGATGT TTCCATCATT TTAGGGGAAG AAGGCAACAT CATTTCCACC AATGGCACAC CTGCTTACTG ATCAGAGTGC ATGTGACAGT AGGGTGGTTG TTGATGGTAA CCTTATCACT AGCAAAGCCC CAGGCTCCGC GACAGAGTTC GCGCTAGCCA TTGTTGAGAA GCTGTTTGGT CGAGAGAAAG CGGTCAGTAT AGCGAAGGAG TTGATTTTTA TGTGATTATA CACTTGGGCA TTTATGCATC AGGTGCCTGT CACCTGTGAG TGATGCTTCT GTGAATAACT ACTTATGCTG CTTTCCTAGG AATGCATAAT ATAAGCCTAT AGCAGCATGT GGCAATCCAT GTGAATGAGG AATAAATGTA CATTATGAGT ATCATGTGTA AAGAGTCGTC GTTGTT
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