Locus
Os01g0724500
Description
Similar to ABC transporter (PDR5-like) isolog (PDR1 ABC transporter).
RAP-DB Gene Symbol Synonym(s)
RAP-DB Gene Name Synonym(s)
CGSNL Gene Symbol
PDR15
CGSNL Gene Name
PLEIOTROPIC DRUG RESISTANCE 15
Oryzabase Gene Symbol Synonym(s)
OsABCG38, OsPDR15
Oryzabase Gene Name Synonym(s)
ABC transporter superfamily ABCG subgroup member 38, pleiotropic drug resistance 15
Transcript Evidence
AK067653 (DDBJ, Best hit)
Protein Evidence
A2ZXE5 (UniProt)
Literature
Note
Manual Curation
Gene Ontology (GO)
Cellular Component: membrane (GO:0016020)
Functional domain (InterPro)
ABC-2 type transporter (IPR013525)
Plant PDR ABC transporter associated (IPR013581)
Full-length cDNA
J013112I11 (Online Clone Ordering)
Expression Databases
TENOR (Os01t0724500-01)
RiceXPro (AK067653)
Others
Oryzabase (12012)
KEGG (Os01t0724500-01)
Transcript |
3306 bp |
>Os01t0724500-01 Similar to ABC transporter (PDR5-like) isolog (PDR1 ABC transporter). TTTGCTGATTTATCTTTAACTCTGGCAAGGCTCCCGGTATTCTACAAACATAGGGACTTC CTGTTTTATAGGCCATGGACTTTTGCACTTCCAAATGTTCTCGTGAGAATCCCTAGCTCC CTGTTTGAGTCGATAATTTGGGTTGCAATAACCTACTACACCATGGGGTTTGCCCCTGAA GCTAGCAGGTTCTTCAAACACCTGCTTGTAGTCTTCATGCTTCAGCAGATGGCTGCAGGA CTGTTCAGAGTCACCGCTGGGTTATGCAGGACTGTTGTGGTAACGAACACTGCAGGGTCT CTTGCAGTTCTGATCATGTTTGTGCTTGGAGGATTCATCCTACCAAAAGATGCAATCCCT AAATGGTGGGTGTGGGCTTACTGGTGTTCACCCCTTACTTATGCATACATTGCCTTTTCT TCCAATGAAATGCATTCTCCAAGGTGGATGGACAAATTTGTACCTGATGGAAAGAGATTG GGAGTGGCAGTTCTAGAAAATTCAGGTGTCTTCACCAATAAGGAATGGTACTGGATTGCA ACTGGCGCCCTTCTAGGGTTCACCATTCTGTTCAACGTGTTATTCTCGCTATCACTTATG TACCTGAACCGTAAGTAGCTACACTGTACTTAGTAATAACCTGTTATGAGTTGCATCTGA CAACAGATTATTTCCTTAACTTCGCCGATTGGCCTTTTCAAGTGAGCAGGTAGTGCAATT AGTATAGTATTACATATATAGTGCCTTTGTATGAATGTTCTCTGCAATTCCAAATATTGA TTCATGTAGATATTGAAAATCTAAAACTTTTAACTTCATAAATTTAAAATCATAGATGCC CAAATTATAAGATTGTATTCTGCAAGCCCAATTAAATTCTGGATTCTTGATTCCATTTTT TATTTCTTTTACAGTTCTTGGGAAGTATTTCTTTCATTAGCACACTTCTTTTTTTAGATA CTTCTCTCCAGCTATATACCTAAAAAGAATGTTTTGGTCATTTTGTCCTTTCTTATCAGC TGTAAATAAATACATTTGATACGTATAATATATCCAATGTCTGTGATAAATAGGTATTGT CCTTCAATTTCAATGACATATTTTTGACATTTTGTAACGGCCATTTATTCTATTCCTTGA ATTAGCTGTTGGAAAACCACAATCCATCCTCCCTGAAGAAACCGATAGTCAGGAGAACAT TCAGGAAGGAAAAAACAAGGCACATATAAAACAGATAATTACAGTTGAAACACCAGAACC TGTATCCCCGAACTCAATTATCACCCTGGATAAGGTGATTCAACAATTGCGTGGATATTC CGCAAACACTTCTGATAGGTCGCACTCATACATTAATGCTGCTGGCAGAACTGCTCCAGG AAGAGGGATGGTTCTTCCATTTGAACCGCTCTACATGTCCTTTAATGAGATAAATTACTA TGTTGATATGCCTTTGAGTCAGGGAGTAACTGCCGATAAGCTTCAACTGCTGTCAGGGAT ATCTGGAGCTTTTCGACCTGGTGTTCTGACTGCTCTTATGGGTGTTAGTGGGGCTGGAAA GACTACCCTCATGGATGTCTTATCTGGGAGAAAGACAGGTGGATATATTGAAGGGGAAAT CTATATATCGGGTTACCCAAAGAACCAAGCAACATTTGCTAGAATATCAGGCTACTGTGA GCAAAATGACATCCACTCCCCACAGATTACTGTAAGGGAGTCCCTACTTTTCTCTGCTTT CCTGCGCCTGCCTAAGGAGGTCAATGATCAAGAAAAGAAGATCTTTGTGGATGAAGTTAT GGAACTGGTTGAGCTTACTGGTCTGAAAGATGCTATTGTGGGCCTCCCTGGTGTGAATGG GCTGTCAACAGAACAAAGAAAGAGGCTGACAATCGCTGTAGAGCTTGTGGCAAACCCCTC AATTATCTTTATGGATGAACCAACTTCTGGTCTTGATGCAAGAGCGGCTGCTATTGTTAT GAGAACTGTACGTAACACTGTCAATACTGGAAGAACCGTTGTATGCACTATTCATCAACC AAGCATTGACATTTTTGAAGCTTTTGATGAGTTGTTGCTACTAAAAAGAGGAGGCCAGGT TATATATTCTGGACCATTGGGTACAAATTCTCATAAAGTTGTTGAGTACTTTGAGGCAAT TCCTGGAGTCCCAAAGATCGAAGAGAATCGCAACCCAGCTACATGGATGCTGGATGTAAG CTCAGCTGCATCAGAAGTTCGATTGGAAATTGATTTTGCTGAATATTACAGGTCATCGAC TATGCACCAGCGAACCAAAGCATTGGTAAAAGAACTGAGCAATCCACCTCCTGGTTCCGA TGACCTCTACTTCCCTAGTCAATACTCGCAGAGCACCTTTAATCAGTTCAAGCTCTGCCT CTGGAAACAATGGTGGACTTACTGGAGAAGCCCTGATTATAACCTTGTCAGGATTTTCTT TGCATTATTTACTGCTTTAATGTTGGGGACTATATTTTGGAGGGTTGGTCACAAGATGGA GAGTTCAAAAGATCTCTTGGTCATCATTGGATCAATGTATGCTGCCGTCTTGTTTGTTGG TTTTGAGAATTCTGTAACTGTTCAACCCGTTGTTGCTGTGGAAAGGACTGTATTTTACAG AGAGCGGGCAGCTGGAATGTACTCGGCTATACCATATGCTCTAGCTCAGGTTGTTGTGGA GATACCGTATGTGTTCGTTGAGACTGTCATTTACACACTTATTGTCTACCCAATGATGTC GTTCCAATGGACACCAGCAAAATTCTTCTGGTTCTTCTATGTTTCATTCTTCACCTTCCT CTATTTCACTTACTATGGCATGATGAACGTCTCCGTATCACCAAACCTTCAGGTTGCTTC CATATTGGGTGCTGCCTTTTACACCCTTTTCAATCTCTTTTCAGGATTCTTCATCCCAAG ACCGAAAATCCCAAAATGGTGGGTTTGGTACTATTGGCTTTGTCCAGTGGCATGGACAGT ATACGGCCTTATTGTGTCACAGTACGGAGATGTGGAGGATTTTATCACGGTCCCTGGACA ATCTGATCAGCAAGTCAGACCTTTCATCAAGGACTATTTTGGCTATGACCCGGACTTCAT GGGCGTCGTGGCTGCAGTGCTGGCTGGCTTTACTGTCTTCTTCGCTTTTACATATGCTTA CTCCATCAGAACCTTAAATTTCCAGCAGAGATAGAAAATCCTGCCATGTATTGCTGTGTG TTGCAGTTCACATGTAAGATGTAACGCTAGTTTTCACCCAGGTATATATTCTATCTTATT GATTGC
CDS |
618 bp |
>Os01t0724500-01 Similar to ABC transporter (PDR5-like) isolog (PDR1 ABC transporter). TTTGCTGATTTATCTTTAACTCTGGCAAGGCTCCCGGTATTCTACAAACATAGGGACTTC CTGTTTTATAGGCCATGGACTTTTGCACTTCCAAATGTTCTCGTGAGAATCCCTAGCTCC CTGTTTGAGTCGATAATTTGGGTTGCAATAACCTACTACACCATGGGGTTTGCCCCTGAA GCTAGCAGGTTCTTCAAACACCTGCTTGTAGTCTTCATGCTTCAGCAGATGGCTGCAGGA CTGTTCAGAGTCACCGCTGGGTTATGCAGGACTGTTGTGGTAACGAACACTGCAGGGTCT CTTGCAGTTCTGATCATGTTTGTGCTTGGAGGATTCATCCTACCAAAAGATGCAATCCCT AAATGGTGGGTGTGGGCTTACTGGTGTTCACCCCTTACTTATGCATACATTGCCTTTTCT TCCAATGAAATGCATTCTCCAAGGTGGATGGACAAATTTGTACCTGATGGAAAGAGATTG GGAGTGGCAGTTCTAGAAAATTCAGGTGTCTTCACCAATAAGGAATGGTACTGGATTGCA ACTGGCGCCCTTCTAGGGTTCACCATTCTGTTCAACGTGTTATTCTCGCTATCACTTATG TACCTGAACCGTAAGTAG
Protein |
205 aa |
>Os01t0724500-01 Similar to ABC transporter (PDR5-like) isolog (PDR1 ABC transporter). FADLSLTLARLPVFYKHRDFLFYRPWTFALPNVLVRIPSSLFESIIWVAITYYTMGFAPE ASRFFKHLLVVFMLQQMAAGLFRVTAGLCRTVVVTNTAGSLAVLIMFVLGGFILPKDAIP KWWVWAYWCSPLTYAYIAFSSNEMHSPRWMDKFVPDGKRLGVAVLENSGVFTNKEWYWIA TGALLGFTILFNVLFSLSLMYLNRK*
CDS
chr01:30217567..30217754 (+ strand) : 188 bp
chr01:30217856..30218016 (+ strand) : 161 bp
chr01:30218299..30218408 (+ strand) : 110 bp
chr01:30218495..30218653 (+ strand) : 159 bp
3'UTR
chr01:30218654..30219321 (+ strand) : 668 bp
chr01:30219431..30219600 (+ strand) : 170 bp
chr01:30220237..30220560 (+ strand) : 324 bp
chr01:30220724..30221014 (+ strand) : 291 bp
chr01:30221099..30221182 (+ strand) : 84 bp
chr01:30221363..30221496 (+ strand) : 134 bp
chr01:30221689..30221916 (+ strand) : 228 bp
chr01:30222016..30222187 (+ strand) : 172 bp
chr01:30222364..30222618 (+ strand) : 255 bp
chr01:30222706..30223067 (+ strand) : 362 bp
FASTA
>Os01t0724500-01 class=Sequence position=chr01:30217567..30223067 (+ strand) TTTGCTGATT TATCTTTAAC TCTGGCAAGG CTCCCGGTAT TCTACAAACA TAGGGACTTC CTGTTTTATA GGCCATGGAC TTTTGCACTT CCAAATGTTC TCGTGAGAAT CCCTAGCTCC CTGTTTGAGT CGATAATTTG GGTTGCAATA ACCTACTACA CCATGGGGTT TGCCCCTGAA GCTAGCAGGT GCTCCTTCTG AGTGATTCAA ATCTACTAAA GTTCTATACC ATTTCGAATT TATATGATTT CTCTCTGCCC TTAACATCCC GATGTTCATC TTGCCTTAGG TTCTTCAAAC ACCTGCTTGT AGTCTTCATG CTTCAGCAGA TGGCTGCAGG ACTGTTCAGA GTCACCGCTG GGTTATGCAG GACTGTTGTG GTAACGAACA CTGCAGGGTC TCTTGCAGTT CTGATCATGT TTGTGCTTGG AGGATTCATC CTACCAAAAG GTAGCCGCTC ATATTTTCAG ACACATATGG TTGTCCTTGC AATGGTACCA TGGGTATAAG GAGATGTGGT GATTCTTAAA AATCAGAAAA GGGAGATACC TTTTGAAATG AAACACAAAT ATTAGTACTC TTGCTGCAAA GAACATTTTA GTAACTTTTT TATAGTGGAC ACTTGTCAAT GTTTAATATT GAGGTGGCTG TTGAAATGAT CACTGTAAAT TAGAATATTA GTCATTTCAC GTGTTACTTG AATTTGAACC ATTCAAATTA TGATTGTTAC AGATGCAATC CCTAAATGGT GGGTGTGGGC TTACTGGTGT TCACCCCTTA CTTATGCATA CATTGCCTTT TCTTCCAATG AAATGCATTC TCCAAGGTGG ATGGACAAAT TTGTAAGTTG ACTCTTGATC ATCTTATTAT TCTGTTCCTG CAGGTAATAG TGGTTCTTGT CTTCTTGACT TTCTGATTGT GTATCAAGGT ACCTGATGGA AAGAGATTGG GAGTGGCAGT TCTAGAAAAT TCAGGTGTCT TCACCAATAA GGAATGGTAC TGGATTGCAA CTGGCGCCCT TCTAGGGTTC ACCATTCTGT TCAACGTGTT ATTCTCGCTA TCACTTATGT ACCTGAACCG TAAGTAGCTA CACTGTACTT AGTAATAACC TGTTATGAGT TGCATCTGAC AACAGATTAT TTCCTTAACT TCGCCGATTG GCCTTTTCAA GTGAGCAGGT AGTGCAATTA GTATAGTATT ACATATATAG TGCCTTTGTA TGAATGTTCT CTGCAATTCC AAATATTGAT TCATGTAGAT ATTGAAAATC TAAAACTTTT AACTTCATAA ATTTAAAATC ATAGATGCCC AAATTATAAG ATTGTATTCT GCAAGCCCAA TTAAATTCTG GATTCTTGAT TCCATTTTTT ATTTCTTTTA CAGTTCTTGG GAAGTATTTC TTTCATTAGC ACACTTCTTT TTTTAGATAC TTCTCTCCAG CTATATACCT AAAAAGAATG TTTTGGTCAT TTTGTCCTTT CTTATCAGCT GTAAATAAAT ACATTTGATA CGTATAATAT ATCCAATGTC TGTGATAAAT AGGTATTGTC CTTCAATTTC AATGACATAT TTTTGACATT TTGTAACGGC CATTTATTCT ATTCCTTGAA TTAGCTGTTG GAAAACCACA ATCCATCCTC CCTGAAGAAA CCGATAGTCA GGAGAACATT CAGGAAGGAA AAAACAAGGC ACATATAAAA CAGATAATTA CAGTTGAAAC ACCAGAACCT GTATCCCCGA ACTCAATTAT CACCCGTAAG CATATTTCTG ATTTGTCATC ATATTCTCTC TTCCTCATGT TCTCATAAAT ATACCTTTTT GTCATTAGCA CTCTCTCTGA AATGATGTTT TCAACTGTTT CTAGTGGATA AGGTGATTCA ACAATTGCGT GGATATTCCG CAAACACTTC TGATAGGTCG CACTCATACA TTAATGCTGC TGGCAGAACT GCTCCAGGAA GAGGGATGGT TCTTCCATTT GAACCGCTCT ACATGTCCTT TAATGAGATA AATTACTATG TTGATATGCC TTTGGTGTGT ATGTTTATCC CTATTCATTG TTCTTCCTTT TCTGACCTGC ATTTCCGTTT CATATAGTTA TTGTGACCAC GGACATTCCA TATCATGCAA TAACTAAAAC CTTTGTTTAC ATTTGGATTT CTTATTCTTT AATACTGGCT TCTTGGAGAA ACACCTCCTC GCATTGTATC CTTGAGCTTA TCAGCTAATG CTTGAGTGTA GTtactacct ctgtttcata ttgtaaggcg ttttagttgt cgtaagtcaa acttctttag ctttgactaa gtttgtagaa aaatgtacta acatcttcaa catcaaatta attcattaaa tccacagtga aatatgtatt tataacatat ttatttggta ttgtagatgt taatatattt ttctataaac ttggtcaaag ttagggaatt ttgacttatg acgaaactca aacaccttac aatatggaat agggggagta GTAGTTTGTA GAGGTTTGGT GTTGCGAGTT AACATATTTT TATGCTACTG TTTTTTGAGT GTGCAGGATA CATATATTCC TGAACTCAAA CTTTTCATGT GGTGTAGTGA CGTTAATTTT CATAACCTGT AATCTTATTT TCCAAACTGT GAATATGTCA GGAAATGAAG AGTCAGGGAG TAACTGCCGA TAAGCTTCAA CTGCTGTCAG GGATATCTGG AGCTTTTCGA CCTGGTGTTC TGACTGCTCT TATGGGTGTT AGTGGGGCTG GAAAGACTAC CCTCATGGAT GTCTTATCTG GGAGAAAGAC AGGTGGATAT ATTGAAGGGG AAATCTATAT ATCGGGTTAC CCAAAGAACC AAGCAACATT TGCTAGAATA TCAGGCTACT GTGAGCAAAA TGACATCCAC TCCCCACAGA TTACTGTAAG GGAGTCCCTA CTTTTCTCTG CTTTCCTGCG CCTGCCTAAG GAGGTCAATG ATCAAGAAAA GAAGGTTTGT TCTTGTGTTA TGCCCTTCTT ACAATATCAA CTATCAACTT GTGTCAATAT GCAGTGAGTT TTATGCTACT AACTTTACTG CGATAAAATC TTGAATGAAC ATTTCCTTTT TTTAATGAGG GATGGATAAG TTGATTAAGG TGGACCTTTG TATGTAGATC TTTGTGGATG AAGTTATGGA ACTGGTTGAG CTTACTGGTC TGAAAGATGC TATTGTGGGC CTCCCTGGTG TGAATGGGCT GTCAACAGAA CAAAGAAAGA GGCTGACAAT CGCTGTAGAG CTTGTGGCAA ACCCCTCAAT TATCTTTATG GATGAACCAA CTTCTGGTCT TGATGCAAGA GCGGCTGCTA TTGTTATGAG AACTGTACGT AACACTGTCA ATACTGGAAG AACCGTTGTA TGCACTATTC ATCAACCAAG CATTGACATT TTTGAAGCTT TTGATGAGGT ATAGTCTACT GTATACATTA TTTTCAAAAT TACTGCTTTA CTGCTCTTTG TTAATTGAAG ATCTTGATTT TTCACCATGC AGTTGTTGCT ACTAAAAAGA GGAGGCCAGG TTATATATTC TGGACCATTG GGTACAAATT CTCATAAAGT TGTTGAGTAC TTTGAGGTTT GTGGTCTGAC ACCCAAACTA TTTCACTTAT CCCCATAGCT TAAATTCCCC TATAATCTTG TGGTGGTACC TTGTAAGAGA CTCTGCAATT ACATGTATAT GATATGATTT CAAGTTCCTT CTTTGTGAAG CCTGCATCTC GAAATGTTCA TTTTTTTGCC CGCTTTATCA AACTAGGCAA TTCCTGGAGT CCCAAAGATC GAAGAGAATC GCAACCCAGC TACATGGATG CTGGATGTAA GCTCAGCTGC ATCAGAAGTT CGATTGGAAA TTGATTTTGC TGAATATTAC AGGTCATCGA CTATGCACCA GTAAGTGCAG TGTTCTTTCC ACAATTCAAT TTCTTCCAGG AGTGGAGGCA GCATTATATT GTTAGCATGC ACTGTCAACC TTGAAGTTTA GATCATGCAA TTGAAGCAAA AAATGGGCTT ACTCTCTTGC ATCTTTAACT CTTAAGGCAT TTAGATAACT GCGACCTTTT TTCTATGGCT AATTATTTTC AGGCGAACCA AAGCATTGGT AAAAGAACTG AGCAATCCAC CTCCTGGTTC CGATGACCTC TACTTCCCTA GTCAATACTC GCAGAGCACC TTTAATCAGT TCAAGCTCTG CCTCTGGAAA CAATGGTGGA CTTACTGGAG AAGCCCTGAT TATAACCTTG TCAGGATTTT CTTTGCATTA TTTACTGCTT TAATGTTGGG GACTATATTT TGGAGGGTTG GTCACAAGAT GTATGTACTT TTATCAGGCT AAGTTATTAT CCGCAGAGTC ATTGAATATT TTCATGAATA CCTATCACTG GTTCCTTAAA TGTTTCTTAT TTGATGCAGG GAGAGTTCAA AAGATCTCTT GGTCATCATT GGATCAATGT ATGCTGCCGT CTTGTTTGTT GGTTTTGAGA ATTCTGTAAC TGTTCAACCC GTTGTTGCTG TGGAAAGGAC TGTATTTTAC AGAGAGCGGG CAGCTGGAAT GTACTCGGCT ATACCATATG CTCTAGCTCA GGTCAGTGAT ATTACTTTGT ATCTCAACTG AACCCAGAAC ACCTTAAAAA TGTCAGACCA ATGGAATATT ATGGAAACTT TGCAACAGAA GGTCACAATC ATGTAGTAGA AATGAGATAT AAATTCATTT CAATATATAA GTAACTTTTT ATAATCAATC TGTTGAATTT TTGTCAGGTT GTTGTGGAGA TACCGTATGT GTTCGTTGAG ACTGTCATTT ACACACTTAT TGTCTACCCA ATGATGTCGT TCCAATGGAC ACCAGCAAAA TTCTTCTGGT TCTTCTATGT TTCATTCTTC ACCTTCCTCT ATTTCACTTA CTATGGCATG ATGAACGTCT CCGTATCACC AAACCTTCAG GTTGCTTCCA TATTGGGTGC TGCCTTTTAC ACCCTTTTCA ATCTCTTTTC AGGATTCTTC ATCCCAAGAC CGGTAAGTCC CTTAATTGTC TATATTTAAG CTCTAAACCT TTTTCTGTAC AATTTCTGTA GGTTGATCTG GTTTTGTATG TTTCTGCAGA AAATCCCAAA ATGGTGGGTT TGGTACTATT GGCTTTGTCC AGTGGCATGG ACAGTATACG GCCTTATTGT GTCACAGTAC GGAGATGTGG AGGATTTTAT CACGGTCCCT GGACAATCTG ATCAGCAAGT CAGACCTTTC ATCAAGGACT ATTTTGGCTA TGACCCGGAC TTCATGGGCG TCGTGGCTGC AGTGCTGGCT GGCTTTACTG TCTTCTTCGC TTTTACATAT GCTTACTCCA TCAGAACCTT AAATTTCCAG CAGAGATAGA AAATCCTGCC ATGTATTGCT GTGTGTTGCA GTTCACATGT AAGATGTAAC GCTAGTTTTC ACCCAGGTAT ATATTCTATC TTATTGATTG C
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