Locus
Os01g0805600
Description
Similar to Cyclin-B1-1.
RAP-DB Gene Symbol Synonym(s)
RAP-DB Gene Name Synonym(s)
CGSNL Gene Symbol
CYCB1;1
CGSNL Gene Name
CYCLIN-B1-1
Oryzabase Gene Symbol Synonym(s)
CycB1;1, CycB1;os;1, Orysa;CycB1;1, OsCycB1;1, CyclaZm, CYCIaZm, OsCYCIaZm
Oryzabase Gene Name Synonym(s)
B-type cyclin 1;1
Transcript Evidence
AK111939 (DDBJ, Best hit)
Protein Evidence
Q0JIF2 (UniProt)
Literature
Note
- CDS sequences are different between Build 5 and IRGSP-1.0.
Manual Curation
Gene Ontology (GO)
Biological Process: regulation of cyclin-dependent protein kinase activity (GO:0000079)
Biological Process: regulation of cell cycle (GO:0051726)
Cellular Component: nucleus (GO:0005634)
Molecular Function: protein kinase binding (GO:0019901)
Functional domain (InterPro)
Cyclin, C-terminal (IPR004367)
Cyclin, N-terminal (IPR006671)
Cyclin-like (IPR013763)
Cyclin A/B/D/E (IPR014400)
Full-length cDNA
001-020-G01 (Online Clone Ordering)
Expression Databases
TENOR (Os01t0805600-01)
Others
Oryzabase (13260)
Transcript |
1251 bp |
>Os01t0805600-01 Similar to Cyclin-B1-1. GATCAGCTCTGATTCTGACCAGAGCATGAGGCAGCAGTCGGAGGGCAGCGCCAGCTCTGT CCGCAAGTGCTCGAGGAAGAAGGTCATCAACACCCTCACCTCCGTGCTCACTGCACGATC AAAGGTTGCCTGTGGAATCACTGACAAACCTCGAGAAGTGATTGAGGACATTGACAAGCT CGACGGTGACAATGAGCTGGCTGTGGTGGACTATATTGAGGATATCTACAAGTTCTACAA GGTCGCTGAGAACGAGTGCCGCCCGTGTGATTACATCGACACCCAGGTGGAGATCAATTC CAAGATGAGGGCCATCCTGGCAGACTGGATAATTGAAGTGCATCACAAGTTTGAGCTCAT GCCAGAGACCCTATACCTCTCCATGTATGTCATCGACCGGTACCTCTCGATGCAGCAAGT GCAGCGGAGGGAGCTGCAGCTGGTAGGTGTCTCTGCCATGCTGATAGCTTGCAAGTACGA GGAGATTTGGGCCCCAGAGGTGAACGACTTCATCTTGATATCAGATAGTGCATACACTAG GGAACAGATTCTTGCAATGGAGAAGGGGATTCTGAATAAGCTTCAGTGGAATCTCACCGT TCCTACAGCATATGTCTTCATTATGCGCTATCTGAAGGCGGGGGCGTCTGCAGATAACAA AAGTGACAAGGAGATGGAGCACATGGCCTTCTTCTTCGCTGAATTGGCACTGATGCAGTA CGGGCTGGTGGCATCCCTGCCTTCCAAGGTTGCTGCCTCTGCTGTCTATGCAGCCAGGCT CACCCTGAAGAAGAGCCCTCTATGGACTGACACTCTCAAGCACCACACTGGATTTACCGA GTCACAGCTATTGGACTCTGCAAAGCTTCTTGTTACCTCGCACTCTACTGCCCCTGAGAG CAAGCTGAGGGTTGTGTACAAGAAGTATTCCAGTGAGCAGCTTGGAGGAGTGGCACTTCG CTCACCAGCAGTGGAACTCTGCAAATAAATGGAGATTAGCTTTGTCTCGTATTTCGTTTG CTTATTTGGTTTAGAGTGCAATGGAAGGCGAGTCTGACATTCATTAGGCGTTTGCTTGTT TTGGAGTCAAGAAAGTTTGGAATCTTGACACGCTTGCTATGACTTCTAATGGCCAGGATT TGGCCTTTATGTGATAATACACCTTGGTGTATATAAACTGTCATCTGAATCTTATCAATA ACGGTTCTTGATAAGTATGAATGATGATCGAATTACATGTTTGCATACAAC
CDS |
963 bp |
>Os01t0805600-01 Similar to Cyclin-B1-1. ATGAGGCAGCAGTCGGAGGGCAGCGCCAGCTCTGTCCGCAAGTGCTCGAGGAAGAAGGTC ATCAACACCCTCACCTCCGTGCTCACTGCACGATCAAAGGTTGCCTGTGGAATCACTGAC AAACCTCGAGAAGTGATTGAGGACATTGACAAGCTCGACGGTGACAATGAGCTGGCTGTG GTGGACTATATTGAGGATATCTACAAGTTCTACAAGGTCGCTGAGAACGAGTGCCGCCCG TGTGATTACATCGACACCCAGGTGGAGATCAATTCCAAGATGAGGGCCATCCTGGCAGAC TGGATAATTGAAGTGCATCACAAGTTTGAGCTCATGCCAGAGACCCTATACCTCTCCATG TATGTCATCGACCGGTACCTCTCGATGCAGCAAGTGCAGCGGAGGGAGCTGCAGCTGGTA GGTGTCTCTGCCATGCTGATAGCTTGCAAGTACGAGGAGATTTGGGCCCCAGAGGTGAAC GACTTCATCTTGATATCAGATAGTGCATACACTAGGGAACAGATTCTTGCAATGGAGAAG GGGATTCTGAATAAGCTTCAGTGGAATCTCACCGTTCCTACAGCATATGTCTTCATTATG CGCTATCTGAAGGCGGGGGCGTCTGCAGATAACAAAAGTGACAAGGAGATGGAGCACATG GCCTTCTTCTTCGCTGAATTGGCACTGATGCAGTACGGGCTGGTGGCATCCCTGCCTTCC AAGGTTGCTGCCTCTGCTGTCTATGCAGCCAGGCTCACCCTGAAGAAGAGCCCTCTATGG ACTGACACTCTCAAGCACCACACTGGATTTACCGAGTCACAGCTATTGGACTCTGCAAAG CTTCTTGTTACCTCGCACTCTACTGCCCCTGAGAGCAAGCTGAGGGTTGTGTACAAGAAG TATTCCAGTGAGCAGCTTGGAGGAGTGGCACTTCGCTCACCAGCAGTGGAACTCTGCAAA TAA
Protein |
320 aa |
>Os01t0805600-01 Similar to Cyclin-B1-1. MRQQSEGSASSVRKCSRKKVINTLTSVLTARSKVACGITDKPREVIEDIDKLDGDNELAV VDYIEDIYKFYKVAENECRPCDYIDTQVEINSKMRAILADWIIEVHHKFELMPETLYLSM YVIDRYLSMQQVQRRELQLVGVSAMLIACKYEEIWAPEVNDFILISDSAYTREQILAMEK GILNKLQWNLTVPTAYVFIMRYLKAGASADNKSDKEMEHMAFFFAELALMQYGLVASLPS KVAASAVYAARLTLKKSPLWTDTLKHHTGFTESQLLDSAKLLVTSHSTAPESKLRVVYKK YSSEQLGGVALRSPAVELCK*
5'UTR
chr01:34151182..34151206 (- strand) : 25 bp
CDS
chr01:34151083..34151181 (- strand) : 99 bp
chr01:34150850..34150975 (- strand) : 126 bp
chr01:34150499..34150747 (- strand) : 249 bp
chr01:34150238..34150411 (- strand) : 174 bp
chr01:34149954..34150132 (- strand) : 179 bp
chr01:34149721..34149856 (- strand) : 136 bp
3'UTR
chr01:34149458..34149720 (- strand) : 263 bp
FASTA
>Os01t0805600-01 class=Sequence position=chr01:34149458..34151206 (- strand) GATCAGCTCT GATTCTGACC AGAGCATGAG GCAGCAGTCG GAGGGCAGCG CCAGCTCTGT CCGCAAGTGC TCGAGGAAGA AGGTCATCAA CACCCTCACC TCCGTGCTCA CTGCACGATC AAAGGTGGGT TATCCACTGA AAATTTCAAA AAGAAAAAAA AAATTCTGCA TACCAATCAC TGACAGGTTA TCTTAAGTTC TTAACCTGTA TTTACTCCAT GCTAATGCCA GGTTGCCTGT GGAATCACTG ACAAACCTCG AGAAGTGATT GAGGACATTG ACAAGCTCGA CGGTGACAAT GAGCTGGCTG TGGTGGACTA TATTGAGGAT ATCTACAAGT TCTACAAGGT CGCTGAGGTA ACTGAGTCGC TCTCTCTGCT TGATCCTTCT TCGATGCCTA CGCAAATGCT GTATGTGCTT GGTCACTGAA AGGTGCAATC TTTCCTGGCC TTGCTGCAGA ACGAGTGCCG CCCGTGTGAT TACATCGACA CCCAGGTGGA GATCAATTCC AAGATGAGGG CCATCCTGGC AGACTGGATA ATTGAAGTGC ATCACAAGTT TGAGCTCATG CCAGAGACCC TATACCTCTC CATGTATGTC ATCGACCGGT ACCTCTCGAT GCAGCAAGTG CAGCGGAGGG AGCTGCAGCT GGTAGGTGTC TCTGCCATGC TGATAGCTTG CAAGTACGAG GAGATTTGGG CCCCAGAGGT AGCAACATTT TTAGCCCCTT TGCTCTGCAC TGCCCATTTC TAGCAGGGAC TTGTTCTGAT TGGATCTCTG TCTATGTATT TGCAGGTGAA CGACTTCATC TTGATATCAG ATAGTGCATA CACTAGGGAA CAGATTCTTG CAATGGAGAA GGGGATTCTG AATAAGCTTC AGTGGAATCT CACCGTTCCT ACAGCATATG TCTTCATTAT GCGCTATCTG AAGGCGGGGG CGTCTGCAGA TAACAAAAGT GACAAGGAGG TAAAGAGCCA TGGCTTCTGT TTGTTTCTGT TTACCATCGG ATTATATTTC ATTGCTAAGC AACAAGTTTG AGCGTGTACT CAAAATTTCT TTTGGTGAAT GCAGATGGAG CACATGGCCT TCTTCTTCGC TGAATTGGCA CTGATGCAGT ACGGGCTGGT GGCATCCCTG CCTTCCAAGG TTGCTGCCTC TGCTGTCTAT GCAGCCAGGC TCACCCTGAA GAAGAGCCCT CTATGGACTG ACACTCTCAA GCACCACACT GGATTTACCG AGTCACAGCT ATTGTAAGCA CTACATGACT CGATGACTTG TTTAACTAGC ATCACTGAAA TTCTCCATTG AGCAGATATA CTGAACTTTA TTTTTCTGCG ATGATTTCAG GGACTCTGCA AAGCTTCTTG TTACCTCGCA CTCTACTGCC CCTGAGAGCA AGCTGAGGGT TGTGTACAAG AAGTATTCCA GTGAGCAGCT TGGAGGAGTG GCACTTCGCT CACCAGCAGT GGAACTCTGC AAATAAATGG AGATTAGCTT TGTCTCGTAT TTCGTTTGCT TATTTGGTTT AGAGTGCAAT GGAAGGCGAG TCTGACATTC ATTAGGCGTT TGCTTGTTTT GGAGTCAAGA AAGTTTGGAA TCTTGACACG CTTGCTATGA CTTCTAATGG CCAGGATTTG GCCTTTATGT GATAATACAC CTTGGTGTAT ATAAACTGTC ATCTGAATCT TATCAATAAC GGTTCTTGAT AAGTATGAAT GATGATCGAA TTACATGTTT GCATACAAC
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