Locus

Os01g0846450

Description

Hypothetical conserved gene.

RAP-DB Gene Symbol Synonym(s)

RAP-DB Gene Name Synonym(s)

CGSNL Gene Symbol

CGSNL Gene Name

Oryzabase Gene Symbol Synonym(s)

Oryzabase Gene Name Synonym(s)

a homolog of Arabidopsis thaliana HEN1 suppressor 1, HESO1 homolog

Transcript Evidence

AK242908 (DDBJ, Best hit)

Protein Evidence

B8AC31 (UniProt)

Literature

Note

Manual Curation

Full-length cDNA

J090082L19 (Online Clone Ordering)

Expression Databases

TENOR (Os01t0846450-01)

Others

Oryzabase (21339)

KEGG (Os01t0846450-01)

Transcript

2388 bp

>Os01t0846450-01 Hypothetical conserved gene.
GTTTTTACTTGCTTCCCCCATCGGTCTCCCTCTGGCGCGCCGCTTTGGCTTTTCCGAAAG
GAAGCCAGTCATCCATCTCCCCCGATTTAACCCGACGCCGTGCCGCTAGTCTGATCCGCC
ACCGCCACGGTCTCCTCCTCGCCCCCGTGCCTCCGCCTCCTCCTCCTCCCGTCCAGCCCG
TATCGACGAGACCAGCAAGGCGCCGCCGCGCGCGGAGCTCTCGACGCCCGCCGACGACCC
GCCCGCCGTCAGATCCGCCTGCTGCATGCTTCCTCCAGGATTTCAGTATGACTGAACATA
TAAATTATGATGTGGTGGAGCAGTGTGTTAAAAACATCCTCTCTCTAATCAAACCAGTGG
AGGATGACAGACGCAAACGACTATCTGCAATTCAGGAGTTATCAAATTCCATTCCTAAAG
TTGCAGCCTTAAGAGGTGCTGTTTTCAAACCTTTTGGATCCTTTGTATCAAATCTTTACT
CAAATTCAGGTGATTTGGATATATCGGTTCACCTCCCTAATAACTCAATCATAAGCAAGA
AGAAAAAGCAATATGTCTTGAGGGAATTAATGAGAGTGCTACAAAATAGAGGTGTTGCCG
GATATGTGCAATTTGTTCCTTTTGCAAGAGTTCCAGTTCTTCAGTATGTGAGCAACACCT
TCGGAATTTCCTGCGATATATCTGTGAACAACTACCCTGGTCGAATTAAATCCAAAATCT
TCTGCTGGATCAGTTCTTTAGATGTGCGTTTTGGTGATATGGTTTTACTGATCAAAGAAT
GGGCGAAAGCTCAAAACATTAATGATCCCAAAACTGGGACCTTAAACTCCTATTCACTTT
GCCTACTAGTCCTCTTCCATTTTCAGGTAATATTCATCTGTGGTATTTCAAGTTATACTG
ATACATGATTTTAGGAATATCCTTGTTACTGTCTTTACCTTATTCCAGACATGTGAGCCT
GCAATCCTTCCACCTCTTAAGGAGATTTATGAAGGGAACATTGAAGAAGAAATGACGGTG
TATGATGAGGAACATCTTGATGAGGTTTGCTCTGAAAATTTAGCAAAATTTCAAAGCAAG
AACAAGGAACGAAGGAATGAAAGCTCTCTTTGCCATCTGCTTGCAACCTTTTTCCACAAA
TTTTCCTCTATCGGCACCCTTTCGGGTGATGTGATATCCACTTACACGGGCCAGTTCAAA
CGAATAGAGGAGAACCCAAGTTGGATGGCCAGATCATACAGCTTATTTGTCAAAGATCCA
ATTGAGAGACCTGATAATGCCGCTAGAGCGGTTGATTTGAAAGGCCTTGAGCGGATTGCT
GGGGCCTTCACCGCTGCTAATCGTAAGTTTGCATCTCTCCAACACGCCAAACGAAATGAC
TTACTGGAGATGCTGTGTACGCCTGCTGTTGGCTCAAAGCTTGGCATAAGAGTTAGCCAA
GAAGTTATGGCTAACTCTTGCACAAATACTCCACGGAGGAACCGTCATCATGGTAGACCA
ACGGAACAAGTCTCAGCGAGGCCATCTGATAATCAAAATCACCGCGGGGCCAGAGAATTT
ACAGTTGGGAGACAAGTTCATAATCCCCCACGGGCGCGCCAATCAACTGGAGCGTACCAT
GCTCTTAACAGTCAGCATGTAATTCCTGCATTGAGCCAACCAGCAGGAATTTATCAAACA
GTTGGCCCATACCAGAGTAATGGTCATCCACAGGTGTATACTAGAGATGTCCAAACAGTA
GGGCACCAAAATTATAGGCATCCAATGGGACACAACACACAGCTCCAAACAGTGGAACCA
TATCAGAGTAATAATAGTCAACCACAGGTTCATGCTACCAGCATCCAAGCACCAAGACAA
TACCAGAATTATACTCGATAACGCCCGGCCAGAAACTACAATCACCAAGTGTTACATGCT
ACAGCGACCGAGACAACGGCCAGAAACTACAATCACCAATTGTTACATGCTGCAGCAACC
GAGACAACGGCCAGAAACTATAATCACCAATCGTTACATGCTACAGCAACCGAGACAGAA
GGATCATACCGGAATCAGCAGCAGAGACAACACACATCTGGCCGTCAAACAAATAGGAAC
GCTGTGAACACAAGGTACGTGCCTGTTGTTGGAAGGCCACAAAATGTAGCATGTGAATCA
CGAGCTCAAGACTCCTCAGGCAGGGGAACATGGCAACAAAGGGAGCCGCGAGCAGGATCA
ACCTACCAAAATAGATAGCAACGGATTATCTTCAGCTTTTGCATCGCAGTGTGTATGAGT
TTTTGGTAGTTTGTGATAGCTTTCGTCAGCCAGCAGTTTGATCTCAGTGCCGCTGCAATG
CAGCGAACTGTATTGGGTAAAATGCAGTTACAAGATTTTCTTTTGTGC

CDS

621 bp

>Os01t0846450-01 Hypothetical conserved gene.
ATGACTGAACATATAAATTATGATGTGGTGGAGCAGTGTGTTAAAAACATCCTCTCTCTA
ATCAAACCAGTGGAGGATGACAGACGCAAACGACTATCTGCAATTCAGGAGTTATCAAAT
TCCATTCCTAAAGTTGCAGCCTTAAGAGGTGCTGTTTTCAAACCTTTTGGATCCTTTGTA
TCAAATCTTTACTCAAATTCAGGTGATTTGGATATATCGGTTCACCTCCCTAATAACTCA
ATCATAAGCAAGAAGAAAAAGCAATATGTCTTGAGGGAATTAATGAGAGTGCTACAAAAT
AGAGGTGTTGCCGGATATGTGCAATTTGTTCCTTTTGCAAGAGTTCCAGTTCTTCAGTAT
GTGAGCAACACCTTCGGAATTTCCTGCGATATATCTGTGAACAACTACCCTGGTCGAATT
AAATCCAAAATCTTCTGCTGGATCAGTTCTTTAGATGTGCGTTTTGGTGATATGGTTTTA
CTGATCAAAGAATGGGCGAAAGCTCAAAACATTAATGATCCCAAAACTGGGACCTTAAAC
TCCTATTCACTTTGCCTACTAGTCCTCTTCCATTTTCAGGTAATATTCATCTGTGGTATT
TCAAGTTATACTGATACATGA

Protein

207 aa

>Os01t0846450-01 Hypothetical conserved gene.
MTEHINYDVVEQCVKNILSLIKPVEDDRRKRLSAIQELSNSIPKVAALRGAVFKPFGSFV
SNLYSNSGDLDISVHLPNNSIISKKKKQYVLRELMRVLQNRGVAGYVQFVPFARVPVLQY
VSNTFGISCDISVNNYPGRIKSKIFCWISSLDVRFGDMVLLIKEWAKAQNINDPKTGTLN
SYSLCLLVLFHFQVIFICGISSYTDT*

5'UTR

chr01:36353072..36353349 (+ strand) : 278 bp

chr01:36354474..36354482 (+ strand) : 9 bp

CDS

chr01:36354483..36354630 (+ strand) : 148 bp

chr01:36355350..36355505 (+ strand) : 156 bp

chr01:36355824..36356002 (+ strand) : 179 bp

chr01:36356088..36356225 (+ strand) : 138 bp

3'UTR

chr01:36356226..36356326 (+ strand) : 101 bp

chr01:36356412..36356542 (+ strand) : 131 bp

chr01:36357193..36357300 (+ strand) : 108 bp

chr01:36357395..36358534 (+ strand) : 1140 bp

FASTA

>Os01t0846450-01 class=Sequence position=chr01:36353072..36358534 (+ strand)
GTTTTTACTT GCTTCCCCCA TCGGTCTCCC TCTGGCGCGC CGCTTTGGCT TTTCCGAAAG GAAGCCAGTC ATCCATCTCC
CCCGATTTAA CCCGACGCCG TGCCGCTAGT CTGATCCGCC ACCGCCACGG TCTCCTCCTC GCCCCCGTGC CTCCGCCTCC
TCCTCCTCCC GTCCAGCCCG TATCGACGAG ACCAGCAAGG CGCCGCCGCG CGCGGAGCTC TCGACGCCCG CCGACGACCC
GCCCGCCGTC AGATCCGCCT GCTGCATGCT TCCTCCAGGT TTAGATCGTT TCCAAAAATC CTCTGCTTCT CTTCAGTAAT
TCCACCCGCG TACGGGGTTT CTCGATCAGA GCGGGGGTTC CGTTTATGAT CGGGTCAGGG TTTACCTATT CCTTGTGATT
TGGGCGGCAT GCGATTTTTG GATTATAGGT GACGTTTGGA GGATATGTAA TATTATGGGT TTTCAGGAAA TCGTTTGGAT
GCTGTAGTTA CCAACCACCG CAGCATGCCT AGCAATTTGT GCAATTACTC GTTACTCTTA ACAGCACTCA CGCTGTCACG
CGCGGTGTGG CACACTGTCA AAATTTGAGA TACGTTGACA CTTCATCATT GGTGGAATCT CGTGAAGGAA TTATTTCAGC
GGATGTGCAT ATGCTATAGT ATGAGAACAT CTATGGTATT ATGTAGATAC AACAATCACT AACCAGTCAC GAGAAGAAGG
TTTTTAGTTG TGATTCTATA ATATATTTGA GAATCAAAAC TAACTTTACA AGCTTATGTG GGTTTGACCC TTCAAAATTT
CTTGGAGTTT TTTATAGTTC AACAAGCGTC AATGATTGCG ATTCATATAT ATACATTGTT TACTAGTAAT GGTTTGTGTG
AGTTCTTGAG ACAAAAATAT GTGGTTGACC ACGCACCAAA TGCATTGTTC CACCACTGCT TTTGGTTGTG ATCATTTTCG
CATAGATAGC GTCATGTCAT GCTGCATTTT GATGGTGATG TTGTGATTCG TGAATGCAAG CAAAATAAAC GCAATGGAAA
CATTTTTTTT GCAAGTCATA TTTTTTGTTT GTTTCTAGTT CTCATCGTTA TCTTCTTTTA ATAAATGTGT CCCTTTGTTC
TCTTAGAGCA TTTTCCCCTC TCAGAAAATT GGAAACATTT AATAAGCATC AGAGTGATCA ATCTTAGTGA ATACTTAATA
GAGAACATAA TTCCATCAAT GTTCTGTTCA GAGCAAATTT GTAGAAAAGA AAACCAGGCA AGCATTGACC TTCTGACTTG
TGGTTAGAAA AATTATCTGG TTGAATCTCC ATTCTCTTTG TTTTTAACAG TATTTTTATT TGTACCCATG TAACATCTTG
TTTTTCCTTT TTGGTCCATT ATATTTCGTT GTTGAACTGC AGGATTTCAG TATGACTGAA CATATAAATT ATGATGTGGT
GGAGCAGTGT GTTAAAAACA TCCTCTCTCT AATCAAACCA GTGGAGGATG ACAGACGCAA ACGACTATCT GCAATTCAGG
AGTTATCAAA TTCCATTCCT AAAGTTGCAG CCTTAAGAGG TGAGTTATCT CATATTTGAT AATTTTTAAG TTTGTAACAA
TGTAATTTTT GATAAGCTAA ATATGAAATG CAATGGCCAC TGTGGACAGT TATGGTCAGT TATCCTTTTG GCACCTACAG
CTGAGGCCCT TGGTCACTTC TCTTGTGATT TGTTGCTAGA ATGGTGGGAA CGGGCAACAA GTAGAATATC TAAGAAACAA
TGTCTTCCAG TGATAGCAGA TAGGCCTGCA GGCTGCAGAA GGTGGTCACA AGTTGTCGGC GAATACAGAT CTAGGCGACT
TAAGTTTAGT CTCACGCATT GCATTCTTTT CAGTAGCTGT CAGTTTCGTA TTAGGGAGAA TCCTCCAGTT GTTTGTTGCC
TTTTTTTTCC TTTTTGCTTC TAATTATCTG CATCATTTGA TCTCTCAAGC CTTTTTGCAT GCTGCTAAAA AGAAAATAAA
GGCAATGGTG ACCAGTGTTC AGTTTATTTT TTCACTACAG TCCTAATGCT GCATAATGTG GAACTATTAG GTGTTTGTTT
TGCTATAATG GGGTCATGAT CTCTTCAAAT GGTATAGATT GTTCAATAAC TTATTTTCCT TCATATACTT GCTTAGTCAA
TGCACAGGTT CTCTAATAAG TTTCCATGAT GGCAAAATGA AATGTCAAAG GATTTAATGA TGATATGATG GTGGTGATTT
AGTGTTGCCT TATCTGAACT TTTAAATTTC TTTAACAGGT GCTGTTTTCA AACCTTTTGG ATCCTTTGTA TCAAATCTTT
ACTCAAATTC AGGTGATTTG GATATATCGG TTCACCTCCC TAATAACTCA ATCATAAGCA AGAAGAAAAA GCAATATGTC
TTGAGGGAAT TAATGAGAGT GCTACAAAAT AGAGGTAAAC CTTTTTTACC ATATTACATA ATAAAGGAGC ATGCAGACTT
CTTCTCATTG CATGATCATT GTACCCATGA AATAATAACC ATGGCTTTTG CGGTAAAACC ATAAAAGGAT TCCATATTAT
GCAACCACAC ATTTACGCAC ATAGGATAGC AAAATCATGT AGGAGTACTA AATATGATGA ACCGTGTATC TTTATTTCAA
AGGAGAATTG GACTTGAAAT TCACAACCTT GTGCTACTAT ATTGGGCAAT TCTTTTTAGT CATACAGGTA GCTCTTATTT
ATATTATGAT TTCGTTGGTT GAATTGTGTC AGGTGTTGCC GGATATGTGC AATTTGTTCC TTTTGCAAGA GTTCCAGTTC
TTCAGTATGT GAGCAACACC TTCGGAATTT CCTGCGATAT ATCTGTGAAC AACTACCCTG GTCGAATTAA ATCCAAAATC
TTCTGCTGGA TCAGTTCTTT AGATGTGCGT TTTGGTGATA TGGTTTTACT GGTAAGACTA GGTAACTAGT AGAGAGTTTC
TTGCTGCCCC ATCATTTTGT TGGAAAGCCC AAGGTTCAAA CTATGTTTTC TTGCAGATCA AAGAATGGGC GAAAGCTCAA
AACATTAATG ATCCCAAAAC TGGGACCTTA AACTCCTATT CACTTTGCCT ACTAGTCCTC TTCCATTTTC AGGTAATATT
CATCTGTGGT ATTTCAAGTT ATACTGATAC ATGATTTTAG GAATATCCTT GTTACTGTCT TTACCTTATT CCAGACATGT
GAGCCTGCAA TCCTTCCACC TCTTAAGGAG ATTTATGAAG GGAACATTGA AGAAGGTATT GCTGGTAAAA TGAACTAATA
TTTTCTTTGA TGATGATTGT CTAGCATATC TGTATCTGAA TTCATTGCAT TTACATACAG AAATGACGGT GTATGATGAG
GAACATCTTG ATGAGGTTTG CTCTGAAAAT TTAGCAAAAT TTCAAAGCAA GAACAAGGAA CGAAGGAATG AAAGCTCTCT
TTGCCATCTG CTTGCAACCT TTTTCCACAA AGTAATTAAA CAGTATGCTC CGTTTCATTG GTAAAGTTAG TATGCTTCTT
GTAAGGACAT ATTTGCTGTT CATGTCTTGG CGAAGCATGT CTTCATGTTT CTAGGAATAT TTCCTATGCC ATATTTTAGT
AAGTTATATC GAGGTTGCTG GTGCTCATGT AGTTTAATAA GTTGAGTTAT TTCAAAAGTC TTTGGCCCTT GCTTTTGTTC
AGCATCGTGG CATCTTGTTA AACTCAAACA TACCTTTTCT CTTTGTGTTT TGTATTTTTT AAACTAATTA ACACTTGACA
GACTCTTCCT TTTAGAGAAG TAAGACGATT TTTGTTATAA CTCAACTCAT CTTCCATGCT AGCCTTTGTT TTGCTCATTT
TGTTATAAGT CCAATAAGAT GATTTGTGTT CAAATCTAAG CTAAGTGAAA TAGCTACTTA TCTTCCTTTC ATTAAACATA
ATTAAACAAA TGAGCTAATC CCTCCTTTTT GTGGGGCTAC TTAATTACTT TGCTCCATTA AACTATATTT TATCCCCATT
AAAATAATGC TACTGTCACT GAAAGCATAT TTAAGATTTA GATGCCATGC ACATTTTTCA TTCGTTACTT TTTGTAACTC
ATGAGATACG AGCTTTACCA GTAATCTTAC ATTGATTGCA GTTTTCCTCT ATCGGCACCC TTTCGGGTGA TGTGATATCC
ACTTACACGG GCCAGTTCAA ACGAATAGAG GAGAACCCAA GTTGGATGGC CAGATCATAC AGCTTATTTG TAAGGATTTC
CTTTTATGGT TGCATTCAGC AGTCTTATTG AAATTTGGAC TATTTACTAA CACAATCTCG TTCGTTCATT ATCTCCTTTT
CAGGTCAAAG ATCCAATTGA GAGACCTGAT AATGCCGCTA GAGCGGTTGA TTTGAAAGGC CTTGAGCGGA TTGCTGGGGC
CTTCACCGCT GCTAATCGTA AGTTTGCATC TCTCCAACAC GCCAAACGAA ATGACTTACT GGAGATGCTG TGTACGCCTG
CTGTTGGCTC AAAGCTTGGC ATAAGAGTTA GCCAAGAAGT TATGGCTAAC TCTTGCACAA ATACTCCACG GAGGAACCGT
CATCATGGTA GACCAACGGA ACAAGTCTCA GCGAGGCCAT CTGATAATCA AAATCACCGC GGGGCCAGAG AATTTACAGT
TGGGAGACAA GTTCATAATC CCCCACGGGC GCGCCAATCA ACTGGAGCGT ACCATGCTCT TAACAGTCAG CATGTAATTC
CTGCATTGAG CCAACCAGCA GGAATTTATC AAACAGTTGG CCCATACCAG AGTAATGGTC ATCCACAGGT GTATACTAGA
GATGTCCAAA CAGTAGGGCA CCAAAATTAT AGGCATCCAA TGGGACACAA CACACAGCTC CAAACAGTGG AACCATATCA
GAGTAATAAT AGTCAACCAC AGGTTCATGC TACCAGCATC CAAGCACCAA GACAATACCA GAATTATACT CGATAACGCC
CGGCCAGAAA CTACAATCAC CAAGTGTTAC ATGCTACAGC GACCGAGACA ACGGCCAGAA ACTACAATCA CCAATTGTTA
CATGCTGCAG CAACCGAGAC AACGGCCAGA AACTATAATC ACCAATCGTT ACATGCTACA GCAACCGAGA CAGAAGGATC
ATACCGGAAT CAGCAGCAGA GACAACACAC ATCTGGCCGT CAAACAAATA GGAACGCTGT GAACACAAGG TACGTGCCTG
TTGTTGGAAG GCCACAAAAT GTAGCATGTG AATCACGAGC TCAAGACTCC TCAGGCAGGG GAACATGGCA ACAAAGGGAG
CCGCGAGCAG GATCAACCTA CCAAAATAGA TAGCAACGGA TTATCTTCAG CTTTTGCATC GCAGTGTGTA TGAGTTTTTG
GTAGTTTGTG ATAGCTTTCG TCAGCCAGCA GTTTGATCTC AGTGCCGCTG CAATGCAGCG AACTGTATTG GGTAAAATGC
AGTTACAAGA TTTTCTTTTG TGC