Locus
Os01g0846450
Description
Homolog of Arabidopsis thaliana HEN1 suppressor 1, Heading date
RAP-DB Gene Symbol Synonym(s)
HESO1
RAP-DB Gene Name Synonym(s)
a homolog of Arabidopsis thaliana HEN1 suppressor 1
CGSNL Gene Symbol
CGSNL Gene Name
Oryzabase Gene Symbol Synonym(s)
Oryzabase Gene Name Synonym(s)
a homolog of Arabidopsis thaliana HEN1 suppressor 1, HESO1 homolog
Transcript Evidence
Inferred from literature
Protein Evidence
Inferred from literature
Literature
PMID: 27322545
Note
Manual Curation
August 30, 2017
Others
Oryzabase (21339)
Transcript |
2306 bp |
>Os01t0846450-02 Homolog of Arabidopsis thaliana HEN1 suppressor 1, Heading date GTTTTTACTTGCTTCCCCCATCGGTCTCCCTCTGGCGCGCCGCTTTGGCTTTTCCGAAAG GAAGCCAGTCATCCATCTCCCCCGATTTAACCCGACGCCGTGCCGCTAGTCTGATCCGCC ACCGCCACGGTCTCCTCCTCGCCCCCGTGCCTCCGCCTCCTCCTCCTCCCGTCCAGCCCG TATCGACGAGACCAGCAAGGCGCCGCCGCGCGCGGAGCTCTCGACGCCCGCCGACGACCC GCCCGCCGTCAGATCCGCCTGCTGCATGCTTCCTCCAGGATTTCAGTATGACTGAACATA TAAATTATGATGTGGTGGAGCAGTGTGTTAAAAACATCCTCTCTCTAATCAAACCAGTGG AGGATGACAGACGCAAACGACTATCTGCAATTCAGGAGTTATCAAATTCCATTCCTAAAG TTGCAGCCTTAAGAGGTGCTGTTTTCAAACCTTTTGGATCCTTTGTATCAAATCTTTACT CAAATTCAGGTGATTTGGATATATCGGTTCACCTCCCTAATAACTCAATCATAAGCAAGA AGAAAAAGCAATATGTCTTGAGGGAATTAATGAGAGTGCTACAAAATAGAGGTGTTGCCG GATATGTGCAATTTGTTCCTTTTGCAAGAGTTCCAGTTCTTCAGTATGTGAGCAACACCT TCGGAATTTCCTGCGATATATCTGTGAACAACTACCCTGGTCGAATTAAATCCAAAATCT TCTGCTGGATCAGTTCTTTAGATGTGCGTTTTGGTGATATGGTTTTACTGATCAAAGAAT GGGCGAAAGCTCAAAACATTAATGATCCCAAAACTGGGACCTTAAACTCCTATTCACTTT GCCTACTAGTCCTCTTCCATTTTCAGACATGTGAGCCTGCAATCCTTCCACCTCTTAAGG AGATTTATGAAGGGAACATTGAAGAAGAAATGACGGTGTATGATGAGGAACATCTTGATG AGGTTTGCTCTGAAAATTTAGCAAAATTTCAAAGCAAGAACAAGGAACGAAGGAATGAAA GCTCTCTTTGCCATCTGCTTGCAACCTTTTTCCACAAATTTTCCTCTATCGGCACCCTTT CGGGTGATGTGATATCCACTTACACGGGCCAGTTCAAACGAATAGAGGAGAACCCAAGTT GGATGGCCAGATCATACAGCTTATTTGTCAAAGATCCAATTGAGAGACCTGATAATGCCG CTAGAGCGGTTGATTTGAAAGGCCTTGAGCGGATTGCTGGGGCCTTCACCGCTGCTAATC GTAAGTTTGCATCTCTCCAACACGCCAAACGAAATGACTTACTGGAGATGCTGTGTACGC CTGCTGTTGGCTCAAAGCTTGGCATAAGAGTTAGCCAAGAAGTTATGGCTAACTCTTGCA CAAATACTCCACGGAGGAACCGTCATCATGGTAGACCAACGGAACAAGTCTCAGCGAGGC CATCTGATAATCAAAATCACCGCGGGGCCAGAGAATTTACAGTTGGGAGACAAGTTCATA ATCCCCCACGGGCGCGCCAATCAACTGGAGCGTACCATGCTCTTAACAGTCAGCATGTAA TTCCTGCATTGAGCCAACCAGCAGGAATTTATCAAACAGTTGGCCCATACCAGAGTAATG GTCATCCACAGGTGTATACTAGAGATGTCCAAACAGTAGGGCACCAAAATTATAGGCATC CAATGGGACACAACACACAGCTCCAAACAGTGGAACCATATCAGAGTAATAATAGTCAAC CACAGGTTCATGCTACCAGCATCCAAGCACCAAGACAATACCAGAATTATACTCGATAAC GCCCGGCCAGAAACTACAATCACCAAGTGTTACATGCTACAGCGACCGAGACAACGGCCA GAAACTACAATCACCAATTGTTACATGCTGCAGCAACCGAGACAACGGCCAGAAACTATA ATCACCAATCGTTACATGCTACAGCAACCGAGACAGAAGGATCATACCGGAATCAGCAGC AGAGACAACACACATCTGGCCGTCAAACAAATAGGAACGCTGTGAACACAAGGTACGTGC CTGTTGTTGGAAGGCCACAAAATGTAGCATGTGAATCACGAGCTCAAGACTCCTCAGGCA GGGGAACATGGCAACAAAGGGAGCCGCGAGCAGGATCAACCTACCAAAATAGATAGCAAC GGATTATCTTCAGCTTTTGCATCGCAGTGTGTATGAGTTTTTGGTAGTTTGTGATAGCTT TCGTCAGCCAGCAGTTTGATCTCAGTGCCGCTGCAATGCAGCGAACTGTATTGGGTAAAA TGCAGTTACAAGATTTTCTTTTGTGC
CDS |
1512 bp |
>Os01t0846450-02 Homolog of Arabidopsis thaliana HEN1 suppressor 1, Heading date ATGACTGAACATATAAATTATGATGTGGTGGAGCAGTGTGTTAAAAACATCCTCTCTCTA ATCAAACCAGTGGAGGATGACAGACGCAAACGACTATCTGCAATTCAGGAGTTATCAAAT TCCATTCCTAAAGTTGCAGCCTTAAGAGGTGCTGTTTTCAAACCTTTTGGATCCTTTGTA TCAAATCTTTACTCAAATTCAGGTGATTTGGATATATCGGTTCACCTCCCTAATAACTCA ATCATAAGCAAGAAGAAAAAGCAATATGTCTTGAGGGAATTAATGAGAGTGCTACAAAAT AGAGGTGTTGCCGGATATGTGCAATTTGTTCCTTTTGCAAGAGTTCCAGTTCTTCAGTAT GTGAGCAACACCTTCGGAATTTCCTGCGATATATCTGTGAACAACTACCCTGGTCGAATT AAATCCAAAATCTTCTGCTGGATCAGTTCTTTAGATGTGCGTTTTGGTGATATGGTTTTA CTGATCAAAGAATGGGCGAAAGCTCAAAACATTAATGATCCCAAAACTGGGACCTTAAAC TCCTATTCACTTTGCCTACTAGTCCTCTTCCATTTTCAGACATGTGAGCCTGCAATCCTT CCACCTCTTAAGGAGATTTATGAAGGGAACATTGAAGAAGAAATGACGGTGTATGATGAG GAACATCTTGATGAGGTTTGCTCTGAAAATTTAGCAAAATTTCAAAGCAAGAACAAGGAA CGAAGGAATGAAAGCTCTCTTTGCCATCTGCTTGCAACCTTTTTCCACAAATTTTCCTCT ATCGGCACCCTTTCGGGTGATGTGATATCCACTTACACGGGCCAGTTCAAACGAATAGAG GAGAACCCAAGTTGGATGGCCAGATCATACAGCTTATTTGTCAAAGATCCAATTGAGAGA CCTGATAATGCCGCTAGAGCGGTTGATTTGAAAGGCCTTGAGCGGATTGCTGGGGCCTTC ACCGCTGCTAATCGTAAGTTTGCATCTCTCCAACACGCCAAACGAAATGACTTACTGGAG ATGCTGTGTACGCCTGCTGTTGGCTCAAAGCTTGGCATAAGAGTTAGCCAAGAAGTTATG GCTAACTCTTGCACAAATACTCCACGGAGGAACCGTCATCATGGTAGACCAACGGAACAA GTCTCAGCGAGGCCATCTGATAATCAAAATCACCGCGGGGCCAGAGAATTTACAGTTGGG AGACAAGTTCATAATCCCCCACGGGCGCGCCAATCAACTGGAGCGTACCATGCTCTTAAC AGTCAGCATGTAATTCCTGCATTGAGCCAACCAGCAGGAATTTATCAAACAGTTGGCCCA TACCAGAGTAATGGTCATCCACAGGTGTATACTAGAGATGTCCAAACAGTAGGGCACCAA AATTATAGGCATCCAATGGGACACAACACACAGCTCCAAACAGTGGAACCATATCAGAGT AATAATAGTCAACCACAGGTTCATGCTACCAGCATCCAAGCACCAAGACAATACCAGAAT TATACTCGATAA
Protein |
504 aa |
>Os01t0846450-02 Homolog of Arabidopsis thaliana HEN1 suppressor 1, Heading date MTEHINYDVVEQCVKNILSLIKPVEDDRRKRLSAIQELSNSIPKVAALRGAVFKPFGSFV SNLYSNSGDLDISVHLPNNSIISKKKKQYVLRELMRVLQNRGVAGYVQFVPFARVPVLQY VSNTFGISCDISVNNYPGRIKSKIFCWISSLDVRFGDMVLLIKEWAKAQNINDPKTGTLN SYSLCLLVLFHFQTCEPAILPPLKEIYEGNIEEEMTVYDEEHLDEVCSENLAKFQSKNKE RRNESSLCHLLATFFHKFSSIGTLSGDVISTYTGQFKRIEENPSWMARSYSLFVKDPIER PDNAARAVDLKGLERIAGAFTAANRKFASLQHAKRNDLLEMLCTPAVGSKLGIRVSQEVM ANSCTNTPRRNRHHGRPTEQVSARPSDNQNHRGAREFTVGRQVHNPPRARQSTGAYHALN SQHVIPALSQPAGIYQTVGPYQSNGHPQVYTRDVQTVGHQNYRHPMGHNTQLQTVEPYQS NNSQPQVHATSIQAPRQYQNYTR*
5'UTR
chr01:36353072..36353349 (+ strand) : 278 bp
chr01:36354474..36354482 (+ strand) : 9 bp
CDS
chr01:36354483..36354630 (+ strand) : 148 bp
chr01:36355350..36355505 (+ strand) : 156 bp
chr01:36355824..36356002 (+ strand) : 179 bp
chr01:36356088..36356183 (+ strand) : 96 bp
chr01:36356266..36356326 (+ strand) : 61 bp
chr01:36356412..36356542 (+ strand) : 131 bp
chr01:36357193..36357300 (+ strand) : 108 bp
chr01:36357395..36358027 (+ strand) : 633 bp
3'UTR
chr01:36358028..36358534 (+ strand) : 507 bp
FASTA
>Os01t0846450-02 class=Sequence position=chr01:36353072..36358534 (+ strand) GTTTTTACTT GCTTCCCCCA TCGGTCTCCC TCTGGCGCGC CGCTTTGGCT TTTCCGAAAG GAAGCCAGTC ATCCATCTCC CCCGATTTAA CCCGACGCCG TGCCGCTAGT CTGATCCGCC ACCGCCACGG TCTCCTCCTC GCCCCCGTGC CTCCGCCTCC TCCTCCTCCC GTCCAGCCCG TATCGACGAG ACCAGCAAGG CGCCGCCGCG CGCGGAGCTC TCGACGCCCG CCGACGACCC GCCCGCCGTC AGATCCGCCT GCTGCATGCT TCCTCCAGGT TTAGATCGTT TCCAAAAATC CTCTGCTTCT CTTCAGTAAT TCCACCCGCG TACGGGGTTT CTCGATCAGA GCGGGGGTTC CGTTTATGAT CGGGTCAGGG TTTACCTATT CCTTGTGATT TGGGCGGCAT GCGATTTTTG GATTATAGGT GACGTTTGGA GGATATGTAA TATTATGGGT TTTCAGGAAA TCGTTTGGAT GCTGTAGTTA CCAACCACCG CAGCATGCCT AGCAATTTGT GCAATTACTC GTTACTCTTA ACAGCACTCA CGCTGTCACG CGCGGTGTGG CACACTGTCA AAATTTGAGA TACGTTGACA CTTCATCATT GGTGGAATCT CGTGAAGGAA TTATTTCAGC GGATGTGCAT ATGCTATAGT ATGAGAACAT CTATGGTATT ATGTAGATAC AACAATCACT AACCAGTCAC GAGAAGAAGG TTTTTAGTTG TGATTCTATA ATATATTTGA GAATCAAAAC TAACTTTACA AGCTTATGTG GGTTTGACCC TTCAAAATTT CTTGGAGTTT TTTATAGTTC AACAAGCGTC AATGATTGCG ATTCATATAT ATACATTGTT TACTAGTAAT GGTTTGTGTG AGTTCTTGAG ACAAAAATAT GTGGTTGACC ACGCACCAAA TGCATTGTTC CACCACTGCT TTTGGTTGTG ATCATTTTCG CATAGATAGC GTCATGTCAT GCTGCATTTT GATGGTGATG TTGTGATTCG TGAATGCAAG CAAAATAAAC GCAATGGAAA CATTTTTTTT GCAAGTCATA TTTTTTGTTT GTTTCTAGTT CTCATCGTTA TCTTCTTTTA ATAAATGTGT CCCTTTGTTC TCTTAGAGCA TTTTCCCCTC TCAGAAAATT GGAAACATTT AATAAGCATC AGAGTGATCA ATCTTAGTGA ATACTTAATA GAGAACATAA TTCCATCAAT GTTCTGTTCA GAGCAAATTT GTAGAAAAGA AAACCAGGCA AGCATTGACC TTCTGACTTG TGGTTAGAAA AATTATCTGG TTGAATCTCC ATTCTCTTTG TTTTTAACAG TATTTTTATT TGTACCCATG TAACATCTTG TTTTTCCTTT TTGGTCCATT ATATTTCGTT GTTGAACTGC AGGATTTCAG TATGACTGAA CATATAAATT ATGATGTGGT GGAGCAGTGT GTTAAAAACA TCCTCTCTCT AATCAAACCA GTGGAGGATG ACAGACGCAA ACGACTATCT GCAATTCAGG AGTTATCAAA TTCCATTCCT AAAGTTGCAG CCTTAAGAGG TGAGTTATCT CATATTTGAT AATTTTTAAG TTTGTAACAA TGTAATTTTT GATAAGCTAA ATATGAAATG CAATGGCCAC TGTGGACAGT TATGGTCAGT TATCCTTTTG GCACCTACAG CTGAGGCCCT TGGTCACTTC TCTTGTGATT TGTTGCTAGA ATGGTGGGAA CGGGCAACAA GTAGAATATC TAAGAAACAA TGTCTTCCAG TGATAGCAGA TAGGCCTGCA GGCTGCAGAA GGTGGTCACA AGTTGTCGGC GAATACAGAT CTAGGCGACT TAAGTTTAGT CTCACGCATT GCATTCTTTT CAGTAGCTGT CAGTTTCGTA TTAGGGAGAA TCCTCCAGTT GTTTGTTGCC TTTTTTTTCC TTTTTGCTTC TAATTATCTG CATCATTTGA TCTCTCAAGC CTTTTTGCAT GCTGCTAAAA AGAAAATAAA GGCAATGGTG ACCAGTGTTC AGTTTATTTT TTCACTACAG TCCTAATGCT GCATAATGTG GAACTATTAG GTGTTTGTTT TGCTATAATG GGGTCATGAT CTCTTCAAAT GGTATAGATT GTTCAATAAC TTATTTTCCT TCATATACTT GCTTAGTCAA TGCACAGGTT CTCTAATAAG TTTCCATGAT GGCAAAATGA AATGTCAAAG GATTTAATGA TGATATGATG GTGGTGATTT AGTGTTGCCT TATCTGAACT TTTAAATTTC TTTAACAGGT GCTGTTTTCA AACCTTTTGG ATCCTTTGTA TCAAATCTTT ACTCAAATTC AGGTGATTTG GATATATCGG TTCACCTCCC TAATAACTCA ATCATAAGCA AGAAGAAAAA GCAATATGTC TTGAGGGAAT TAATGAGAGT GCTACAAAAT AGAGGTAAAC CTTTTTTACC ATATTACATA ATAAAGGAGC ATGCAGACTT CTTCTCATTG CATGATCATT GTACCCATGA AATAATAACC ATGGCTTTTG CGGTAAAACC ATAAAAGGAT TCCATATTAT GCAACCACAC ATTTACGCAC ATAGGATAGC AAAATCATGT AGGAGTACTA AATATGATGA ACCGTGTATC TTTATTTCAA AGGAGAATTG GACTTGAAAT TCACAACCTT GTGCTACTAT ATTGGGCAAT TCTTTTTAGT CATACAGGTA GCTCTTATTT ATATTATGAT TTCGTTGGTT GAATTGTGTC AGGTGTTGCC GGATATGTGC AATTTGTTCC TTTTGCAAGA GTTCCAGTTC TTCAGTATGT GAGCAACACC TTCGGAATTT CCTGCGATAT ATCTGTGAAC AACTACCCTG GTCGAATTAA ATCCAAAATC TTCTGCTGGA TCAGTTCTTT AGATGTGCGT TTTGGTGATA TGGTTTTACT GGTAAGACTA GGTAACTAGT AGAGAGTTTC TTGCTGCCCC ATCATTTTGT TGGAAAGCCC AAGGTTCAAA CTATGTTTTC TTGCAGATCA AAGAATGGGC GAAAGCTCAA AACATTAATG ATCCCAAAAC TGGGACCTTA AACTCCTATT CACTTTGCCT ACTAGTCCTC TTCCATTTTC AGGTAATATT CATCTGTGGT ATTTCAAGTT ATACTGATAC ATGATTTTAG GAATATCCTT GTTACTGTCT TTACCTTATT CCAGACATGT GAGCCTGCAA TCCTTCCACC TCTTAAGGAG ATTTATGAAG GGAACATTGA AGAAGGTATT GCTGGTAAAA TGAACTAATA TTTTCTTTGA TGATGATTGT CTAGCATATC TGTATCTGAA TTCATTGCAT TTACATACAG AAATGACGGT GTATGATGAG GAACATCTTG ATGAGGTTTG CTCTGAAAAT TTAGCAAAAT TTCAAAGCAA GAACAAGGAA CGAAGGAATG AAAGCTCTCT TTGCCATCTG CTTGCAACCT TTTTCCACAA AGTAATTAAA CAGTATGCTC CGTTTCATTG GTAAAGTTAG TATGCTTCTT GTAAGGACAT ATTTGCTGTT CATGTCTTGG CGAAGCATGT CTTCATGTTT CTAGGAATAT TTCCTATGCC ATATTTTAGT AAGTTATATC GAGGTTGCTG GTGCTCATGT AGTTTAATAA GTTGAGTTAT TTCAAAAGTC TTTGGCCCTT GCTTTTGTTC AGCATCGTGG CATCTTGTTA AACTCAAACA TACCTTTTCT CTTTGTGTTT TGTATTTTTT AAACTAATTA ACACTTGACA GACTCTTCCT TTTAGAGAAG TAAGACGATT TTTGTTATAA CTCAACTCAT CTTCCATGCT AGCCTTTGTT TTGCTCATTT TGTTATAAGT CCAATAAGAT GATTTGTGTT CAAATCTAAG CTAAGTGAAA TAGCTACTTA TCTTCCTTTC ATTAAACATA ATTAAACAAA TGAGCTAATC CCTCCTTTTT GTGGGGCTAC TTAATTACTT TGCTCCATTA AACTATATTT TATCCCCATT AAAATAATGC TACTGTCACT GAAAGCATAT TTAAGATTTA GATGCCATGC ACATTTTTCA TTCGTTACTT TTTGTAACTC ATGAGATACG AGCTTTACCA GTAATCTTAC ATTGATTGCA GTTTTCCTCT ATCGGCACCC TTTCGGGTGA TGTGATATCC ACTTACACGG GCCAGTTCAA ACGAATAGAG GAGAACCCAA GTTGGATGGC CAGATCATAC AGCTTATTTG TAAGGATTTC CTTTTATGGT TGCATTCAGC AGTCTTATTG AAATTTGGAC TATTTACTAA CACAATCTCG TTCGTTCATT ATCTCCTTTT CAGGTCAAAG ATCCAATTGA GAGACCTGAT AATGCCGCTA GAGCGGTTGA TTTGAAAGGC CTTGAGCGGA TTGCTGGGGC CTTCACCGCT GCTAATCGTA AGTTTGCATC TCTCCAACAC GCCAAACGAA ATGACTTACT GGAGATGCTG TGTACGCCTG CTGTTGGCTC AAAGCTTGGC ATAAGAGTTA GCCAAGAAGT TATGGCTAAC TCTTGCACAA ATACTCCACG GAGGAACCGT CATCATGGTA GACCAACGGA ACAAGTCTCA GCGAGGCCAT CTGATAATCA AAATCACCGC GGGGCCAGAG AATTTACAGT TGGGAGACAA GTTCATAATC CCCCACGGGC GCGCCAATCA ACTGGAGCGT ACCATGCTCT TAACAGTCAG CATGTAATTC CTGCATTGAG CCAACCAGCA GGAATTTATC AAACAGTTGG CCCATACCAG AGTAATGGTC ATCCACAGGT GTATACTAGA GATGTCCAAA CAGTAGGGCA CCAAAATTAT AGGCATCCAA TGGGACACAA CACACAGCTC CAAACAGTGG AACCATATCA GAGTAATAAT AGTCAACCAC AGGTTCATGC TACCAGCATC CAAGCACCAA GACAATACCA GAATTATACT CGATAACGCC CGGCCAGAAA CTACAATCAC CAAGTGTTAC ATGCTACAGC GACCGAGACA ACGGCCAGAA ACTACAATCA CCAATTGTTA CATGCTGCAG CAACCGAGAC AACGGCCAGA AACTATAATC ACCAATCGTT ACATGCTACA GCAACCGAGA CAGAAGGATC ATACCGGAAT CAGCAGCAGA GACAACACAC ATCTGGCCGT CAAACAAATA GGAACGCTGT GAACACAAGG TACGTGCCTG TTGTTGGAAG GCCACAAAAT GTAGCATGTG AATCACGAGC TCAAGACTCC TCAGGCAGGG GAACATGGCA ACAAAGGGAG CCGCGAGCAG GATCAACCTA CCAAAATAGA TAGCAACGGA TTATCTTCAG CTTTTGCATC GCAGTGTGTA TGAGTTTTTG GTAGTTTGTG ATAGCTTTCG TCAGCCAGCA GTTTGATCTC AGTGCCGCTG CAATGCAGCG AACTGTATTG GGTAAAATGC AGTTACAAGA TTTTCTTTTG TGC