Locus
Os01g0854500
Description
WUSCHEL-type homeobox protein, Specification and maintenance of the stem cells (quiescent center cells) in the root apical meristem
RAP-DB Gene Symbol Synonym(s)
QHB
RAP-DB Gene Name Synonym(s)
quiescent-center-specific homeobox
CGSNL Gene Symbol
QHB
CGSNL Gene Name
QUIESCENT-CENTER-SPECIFIC-HOMEOBOX (QHB) GENE
Oryzabase Gene Symbol Synonym(s)
OsWOX9, WOX9, WOX5, Os WOX5, OsWOX5, QHB/OsWOX9
Oryzabase Gene Name Synonym(s)
quiescent-center-specific-homeobox (QHB) gene, WUSCHEL-related homeobox 9, Protein WOX5, Quiescent-specific homeobox protein
Transcript Evidence
Protein Evidence
Literature
PMID: 12904206
Note
Manual Curation
June 21, 2021
Gene Ontology (GO)
Molecular Function: DNA binding (GO:0003677)
Functional domain (InterPro)
Homeobox-like domain superfamily (IPR009057)
Homeobox domain (IPR001356)
Experimentally confirmed subcellular location
nucleus (GO:0005634)
Full-length cDNA
J033087F22 (Online Clone Ordering)
Expression Databases
TENOR (Os01t0854500-01)
RiceXPro (AK102203)
Others
Oryzabase (3118)
KEGG (Os01t0854500-01)
Transcript |
1179 bp |
>Os01t0854500-01 WUSCHEL-type homeobox protein, Specification and maintenance of the stem cells (quiescent center cells) in the root apical meristem AGCATTGCTTCTGATCAGAAGAAGATCCCGGAAGAGACCAAATCAGAAGCTAAACCTATC TACCACAAGGCCAAGTTACGTTAGACCGTTTTGATCAGTGAATTAGCTTTCAAGCAGTTC TACTGCTCCCAGCCGCTCGATCGATCGATCGATCAAACAAGGTAGCTAGCTAGCTCAGGA TCAAATCTGGTTTGTCTACATATATAGGTAGTGATCGATCAGTCGGTCGGTCATGGAGGC TCTTAGCGGGCGAGTGGGGGTGAAGTGTGGGCGGTGGAACCCGACGGCGGAGCAGGTGAA GGTCCTGACGGAGCTGTTCCGAGCGGGGTTGCGGACGCCGAGCACGGAGCAGATCCAGCG CATCTCCACTCACCTCAGCGCATTCGGCAAGGTGGAGAGCAAGAACGTCTTCTACTGGTT CCAGAACCACAAGGCCCGCGAGCGCCACCACCACAAGAAGCGCCGCCGCGGCGCCTCCTC CCCCGACAGCGGCAGCAACGATGACGATGGCCGCGCCGCAGCCCACGAGGGCGACGCCGA CCTCGTCCTGCAGCCTCCTGAGAGCAAGCGGGAGGCCAGAAGCTACGGCCATCATCACCG GCTCATGACATGCTACGTGAGGGATGTGGTGGAGACGGAAGCGATGTGGGAGCGGCCGAC GAGGGAGGTGGAAACGCTGGAGCTGTTCCCACTCAAGTCGTATGACCTCGAGGTGGACAA GGTCCGGTATGTGAGGGGCGGCGGTGGCGAGCAGTGCAGGGAGATCTCGTTCTTCGACGT CGCTGCCGGCCGGGATCCGCCGCTGGAGCTCAGGCTTTGCAGCTTCGGCCTCTAGATCGA CCCGTGCATTGATGTGCCGCACATATGGCATGAGATGCAGCTTGCCGCGACTGTACCTGG CCTCTTGTCGCTGTGCCTAGTCCTAGTTCTAGCTGCCCCACATCAAAAGGAGTACGTACG AGATGTCATGAGATACGGCATGTGTTGTGGGAAAGTCCGTTGTTGCATGCAGTATCTGGG AGGATCAGGAAAGAGCACGCAAACGAGATTTCCCCATTGCCCTTTTCCTTGGTCTTTCCA TCATGAGATGTACTTCTACTTTTCTTCTTTTCTGCTACATGGATACTAACATGGTCACTG CTGATACTTCTATATGATATATCCATTAATTAATATTCC
CDS |
603 bp |
>Os01t0854500-01 WUSCHEL-type homeobox protein, Specification and maintenance of the stem cells (quiescent center cells) in the root apical meristem ATGGAGGCTCTTAGCGGGCGAGTGGGGGTGAAGTGTGGGCGGTGGAACCCGACGGCGGAG CAGGTGAAGGTCCTGACGGAGCTGTTCCGAGCGGGGTTGCGGACGCCGAGCACGGAGCAG ATCCAGCGCATCTCCACTCACCTCAGCGCATTCGGCAAGGTGGAGAGCAAGAACGTCTTC TACTGGTTCCAGAACCACAAGGCCCGCGAGCGCCACCACCACAAGAAGCGCCGCCGCGGC GCCTCCTCCCCCGACAGCGGCAGCAACGATGACGATGGCCGCGCCGCAGCCCACGAGGGC GACGCCGACCTCGTCCTGCAGCCTCCTGAGAGCAAGCGGGAGGCCAGAAGCTACGGCCAT CATCACCGGCTCATGACATGCTACGTGAGGGATGTGGTGGAGACGGAAGCGATGTGGGAG CGGCCGACGAGGGAGGTGGAAACGCTGGAGCTGTTCCCACTCAAGTCGTATGACCTCGAG GTGGACAAGGTCCGGTATGTGAGGGGCGGCGGTGGCGAGCAGTGCAGGGAGATCTCGTTC TTCGACGTCGCTGCCGGCCGGGATCCGCCGCTGGAGCTCAGGCTTTGCAGCTTCGGCCTC TAG
Protein |
200 aa |
>Os01t0854500-01 WUSCHEL-type homeobox protein, Specification and maintenance of the stem cells (quiescent center cells) in the root apical meristem MEALSGRVGVKCGRWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVF YWFQNHKARERHHHKKRRRGASSPDSGSNDDDGRAAAHEGDADLVLQPPESKREARSYGH HHRLMTCYVRDVVETEAMWERPTREVETLELFPLKSYDLEVDKVRYVRGGGGEQCREISF FDVAAGRDPPLELRLCSFGL*
5'UTR
chr01:36814792..36815023 (- strand) : 232 bp
CDS
chr01:36814413..36814791 (- strand) : 379 bp
chr01:36814080..36814303 (- strand) : 224 bp
3'UTR
chr01:36813736..36814079 (- strand) : 344 bp
FASTA
>Os01t0854500-01 class=Sequence position=chr01:36813736..36815023 (- strand) AGCATTGCTT CTGATCAGAA GAAGATCCCG GAAGAGACCA AATCAGAAGC TAAACCTATC TACCACAAGG CCAAGTTACG TTAGACCGTT TTGATCAGTG AATTAGCTTT CAAGCAGTTC TACTGCTCCC AGCCGCTCGA TCGATCGATC GATCAAACAA GGTAGCTAGC TAGCTCAGGA TCAAATCTGG TTTGTCTACA TATATAGGTA GTGATCGATC AGTCGGTCGG TCATGGAGGC TCTTAGCGGG CGAGTGGGGG TGAAGTGTGG GCGGTGGAAC CCGACGGCGG AGCAGGTGAA GGTCCTGACG GAGCTGTTCC GAGCGGGGTT GCGGACGCCG AGCACGGAGC AGATCCAGCG CATCTCCACT CACCTCAGCG CATTCGGCAA GGTGGAGAGC AAGAACGTCT TCTACTGGTT CCAGAACCAC AAGGCCCGCG AGCGCCACCA CCACAAGAAG CGCCGCCGCG GCGCCTCCTC CCCCGACAGC GGCAGCAACG ATGACGATGG CCGCGCCGCA GCCCACGAGG GCGACGCCGA CCTCGTCCTG CAGCCTCCTG AGAGCAAGCG GGAGGCCAGA AGCTACGGCC ATCATCACCG GCTCATGACA TGTAAGCATA CATACTTTGA TTAATTATTT CGCCTATATA CATGCATACG TACGCATGAA TACCCATGAT CGAATAGCTG ATCAAGTTGC TGTTCGATCC GCGCTTGCAG GCTACGTGAG GGATGTGGTG GAGACGGAAG CGATGTGGGA GCGGCCGACG AGGGAGGTGG AAACGCTGGA GCTGTTCCCA CTCAAGTCGT ATGACCTCGA GGTGGACAAG GTCCGGTATG TGAGGGGCGG CGGTGGCGAG CAGTGCAGGG AGATCTCGTT CTTCGACGTC GCTGCCGGCC GGGATCCGCC GCTGGAGCTC AGGCTTTGCA GCTTCGGCCT CTAGATCGAC CCGTGCATTG ATGTGCCGCA CATATGGCAT GAGATGCAGC TTGCCGCGAC TGTACCTGGC CTCTTGTCGC TGTGCCTAGT CCTAGTTCTA GCTGCCCCAC ATCAAAAGGA GTACGTACGA GATGTCATGA GATACGGCAT GTGTTGTGGG AAAGTCCGTT GTTGCATGCA GTATCTGGGA GGATCAGGAA AGAGCACGCA AACGAGATTT CCCCATTGCC CTTTTCCTTG GTCTTTCCAT CATGAGATGT ACTTCTACTT TTCTTCTTTT CTGCTACATG GATACTAACA TGGTCACTGC TGATACTTCT ATATGATATA TCCATTAATT AATATTCC
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