Locus

Os02g0559400

Description

12-oxophytodienoic acid reductase (EC:1.3.1.-), Jasmonic acid (JA)-mediated defense signaling

RAP-DB Gene Symbol Synonym(s)

OPR8, OsOPR02-1, OsOPR8

RAP-DB Gene Name Synonym(s)

12-OXOPHYTODIENOATE REDUCTASE 8, 12-oxo-phytodienoic acid reductase 8

CGSNL Gene Symbol

OPR8

CGSNL Gene Name

12-OXOPHYTODIENOATE REDUCTASE 8

Oryzabase Gene Symbol Synonym(s)

OsOPR8, OsOPR7, OsOPR02-1

Oryzabase Gene Name Synonym(s)

12-oxo-phytodienoic acid reductase 8

Transcript Evidence

AK069898

Protein Evidence

Q0E0C6

Literature

PMID: 23602899

PMID: 21249367

Note

Manual Curation

May 9, 2017

Gene Ontology (GO)

Biological Process: oxidation-reduction process (GO:0055114)

Molecular Function: catalytic activity (GO:0003824)

Molecular Function: FMN binding (GO:0010181)

Molecular Function: oxidoreductase activity (GO:0016491)

Functional domain (InterPro)

Aldolase-type TIM barrel (IPR013785)

NADH:flavin oxidoreductase/NADH oxidase, N-terminal (IPR001155)

Experimentally confirmed subcellular location

cytosol (GO:0005829)

peroxisome (GO:0005777)

Full-length cDNA

J023036E18 (Online Clone Ordering)

Expression Databases

TENOR (Os02t0559400-01)

Others

Oryzabase (8762)

Transcript

1333 bp

>Os02t0559400-01 12-oxophytodienoic acid reductase (EC:1.3.1.-), Jasmonic acid (JA)-mediated defense signaling
GTGCAAATCAAATCACAGCAATGCATGATTCGCAAAAAAGCCTCCCCACACTGCCTACAT
GACGTCAGCGGTTCTTGCCCTCACCTCTCGATTCTTCTCCACTCGAGCAGAAGACCGGAA
TCAGCTCCCGTACCCTGTTTGTTACCCATGGAAGCGAAAATTCCCCTCCTTACTCCTCAC
ACCATGGGGAGATTCCACCTCGCCCACAGGGTTGTCCATGCGCCGCTGACCAGATCGAGG
TGCTACAATAATCTTCCTCAAGAACATGTTCAGCTGTACTACTCGCAGAGGGCCACAAAT
GGCGGCCTTCTGATCGCTGAAGCCACCGGGGTCTCGGAGACTGCTCAAGGGTATCCAAAC
ACACCGGGTATATGGACAAAGGAGCAGGTGGAAGCTTGGAGGACGGTTGTGGATGCAGTG
CATCAGAAGGGTGGTGTTTTCTTCTGCCAAATCTGGCATGTAGGGAGGGCATCTACCAAT
GATTATCAGCCCAATGGACAAACACCAATTCCTTGTACAGACAAGAAAATCACTCCTACA
GTTCTCAAAGATGGAACTGTCGAGGAATTCTCTGCCCCAAGGAGGCTAAGAGAAGATGAG
ATCCCCCAAATTGTTGATGATTTCCGAATTGCTGCTAGGAATTGCATTGAAGCAGGCTTT
GACGGAGTTGAAATCCACTGCGCATTTGGGTACCTAATTGAACAGTTCATGAAAGATGGT
GTCAACGACAGAACTGACAAGTACGGAGGAAGCATCGCAAACCGTTGCCGCTTTGCTCTA
GAGGTAATCCAAGCAGCCATCGATGAGATCGGATCGGACAGAGTAGGTGTCCGTCTCTCG
CCATACTCAAACTGCCTGGACTGTTGGGACTCAGACCCAGATGCACTTGGCCTCTACATG
ATCCAAGCCATGAGCAAGCTGGGCGTTCTCTACTGCAGCATGGTTGAGCCTGAGGTGGTC
AAAGTAGACGGCAAGGTGCAGATTCCTTACAAGCTATGGCACTTCAGGAAAGTGTTTGCT
GGCACTTTCATCGTCGCTGGAGGATACAACAGAGAAGAAGGCAATAGAGCAGTGTCTCAG
GGTTACACAGACCTGGTAGCATATGGTAAATGGTTCTTGGCAAACCCGGATCTGCCTAGG
CGGTTTGAGCTGAATGCGCCTCTGAACAAGTATGACAGATCGACGTTCTACACTTCTGAT
CCAGTTATCGGGTACACCGATTACCCTTTTCTCAGTCCTCTGTGAGTATTGCATTTGTTT
TAATTAAGCGAGAAATTGCAATCCATTCCTCAGAGCTCTTGACTTGGAATCACAATAAAA
TTAAATTGATTTG

CDS

1221 bp

>Os02t0559400-01 12-oxophytodienoic acid reductase (EC:1.3.1.-), Jasmonic acid (JA)-mediated defense signaling
ATGATTCGCAAAAAAGCCTCCCCACACTGCCTACATGACGTCAGCGGTTCTTGCCCTCAC
CTCTCGATTCTTCTCCACTCGAGCAGAAGACCGGAATCAGCTCCCGTACCCTGTTTGTTA
CCCATGGAAGCGAAAATTCCCCTCCTTACTCCTCACACCATGGGGAGATTCCACCTCGCC
CACAGGGTTGTCCATGCGCCGCTGACCAGATCGAGGTGCTACAATAATCTTCCTCAAGAA
CATGTTCAGCTGTACTACTCGCAGAGGGCCACAAATGGCGGCCTTCTGATCGCTGAAGCC
ACCGGGGTCTCGGAGACTGCTCAAGGGTATCCAAACACACCGGGTATATGGACAAAGGAG
CAGGTGGAAGCTTGGAGGACGGTTGTGGATGCAGTGCATCAGAAGGGTGGTGTTTTCTTC
TGCCAAATCTGGCATGTAGGGAGGGCATCTACCAATGATTATCAGCCCAATGGACAAACA
CCAATTCCTTGTACAGACAAGAAAATCACTCCTACAGTTCTCAAAGATGGAACTGTCGAG
GAATTCTCTGCCCCAAGGAGGCTAAGAGAAGATGAGATCCCCCAAATTGTTGATGATTTC
CGAATTGCTGCTAGGAATTGCATTGAAGCAGGCTTTGACGGAGTTGAAATCCACTGCGCA
TTTGGGTACCTAATTGAACAGTTCATGAAAGATGGTGTCAACGACAGAACTGACAAGTAC
GGAGGAAGCATCGCAAACCGTTGCCGCTTTGCTCTAGAGGTAATCCAAGCAGCCATCGAT
GAGATCGGATCGGACAGAGTAGGTGTCCGTCTCTCGCCATACTCAAACTGCCTGGACTGT
TGGGACTCAGACCCAGATGCACTTGGCCTCTACATGATCCAAGCCATGAGCAAGCTGGGC
GTTCTCTACTGCAGCATGGTTGAGCCTGAGGTGGTCAAAGTAGACGGCAAGGTGCAGATT
CCTTACAAGCTATGGCACTTCAGGAAAGTGTTTGCTGGCACTTTCATCGTCGCTGGAGGA
TACAACAGAGAAGAAGGCAATAGAGCAGTGTCTCAGGGTTACACAGACCTGGTAGCATAT
GGTAAATGGTTCTTGGCAAACCCGGATCTGCCTAGGCGGTTTGAGCTGAATGCGCCTCTG
AACAAGTATGACAGATCGACGTTCTACACTTCTGATCCAGTTATCGGGTACACCGATTAC
CCTTTTCTCAGTCCTCTGTGA

Protein

407 aa

>Os02t0559400-01 12-oxophytodienoic acid reductase (EC:1.3.1.-), Jasmonic acid (JA)-mediated defense signaling
MIRKKASPHCLHDVSGSCPHLSILLHSSRRPESAPVPCLLPMEAKIPLLTPHTMGRFHLA
HRVVHAPLTRSRCYNNLPQEHVQLYYSQRATNGGLLIAEATGVSETAQGYPNTPGIWTKE
QVEAWRTVVDAVHQKGGVFFCQIWHVGRASTNDYQPNGQTPIPCTDKKITPTVLKDGTVE
EFSAPRRLREDEIPQIVDDFRIAARNCIEAGFDGVEIHCAFGYLIEQFMKDGVNDRTDKY
GGSIANRCRFALEVIQAAIDEIGSDRVGVRLSPYSNCLDCWDSDPDALGLYMIQAMSKLG
VLYCSMVEPEVVKVDGKVQIPYKLWHFRKVFAGTFIVAGGYNREEGNRAVSQGYTDLVAY
GKWFLANPDLPRRFELNAPLNKYDRSTFYTSDPVIGYTDYPFLSPL*

5'UTR

chr02:21231343..21231366 (- strand) : 24 bp

CDS

chr02:21231158..21231342 (- strand) : 185 bp

chr02:21230547..21230818 (- strand) : 272 bp

chr02:21229846..21230019 (- strand) : 174 bp

chr02:21229055..21229644 (- strand) : 590 bp

3'UTR

chr02:21228967..21229054 (- strand) : 88 bp

FASTA

>Os02t0559400-01 class=Sequence position=chr02:21228967..21231366 (- strand)
GTGCAAATCA AATCACAGCA ATGCATGATT CGCAAAAAAG CCTCCCCACA CTGCCTACAT GACGTCAGCG GTTCTTGCCC
TCACCTCTCG ATTCTTCTCC ACTCGAGCAG AAGACCGGAA TCAGCTCCCG TACCCTGTTT GTTACCCATG GAAGCGAAAA
TTCCCCTCCT TACTCCTCAC ACCATGGGGA GATTCCACCT CGCCCACAGG TATGTGCTGC TATATGTCCA TCCATCGCCT
TTGGTTTTGT AATAGCAATC GCTCCCTACT TGCTAGGATT CTTCAGCCCT CGAACTGGAT GACGTTAATC GATCAATCGA
TTATCTAGAT AACAATTCTT CCTCATAGTT AAGGTAGTGT CTGGCTACTG CCTACTGCAC TGCGGTTTCA GCTGTTAAGG
TTTAGTGCCC TCAAGGTGTT TGATGGATTG CCTCTGAGCC TGGAGGGTGG CTGCCTGGGC GAATCTTGAT GTTTGGAGCT
AGCTAACCTC AAGAAATTTC TCTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTTCCTCTT GGTCTTAGGG TTGTCCATGC
GCCGCTGACC AGATCGAGGT GCTACAATAA TCTTCCTCAA GAACATGTTC AGCTGTACTA CTCGCAGAGG GCCACAAATG
GCGGCCTTCT GATCGCTGAA GCCACCGGGG TCTCGGAGAC TGCTCAAGGG TATCCAAACA CACCGGGTAT ATGGACAAAG
GAGCAGGTGG AAGCTTGGAG GACGGTTGTG GATGCAGTGC ATCAGAAGGG TGGTGTTTTC TTCTGCCAAA TCTGGCATGT
AGGGAGGGCA TCTACCAATG GTATTATTAT CCATATCATT ATCTTCCTAC AAGTTTGGAT ATATTGAAAT TTTTATGAAT
GCGTGTTGCT TGATGAATTT CACTCTTAAC TTGGTTATTG CAATGGTAAA TTTCATATGG GATCAATAAA CTGAAGTTTT
CTGAGCCTGC TTGACTTTAA TCCTTTCAAA AGCAGTTGTG GCATTTCATC TTGTAGGATA GGACATTGGA ATATTTAGAA
TATCAGGTTG TTTGCATGTG AAAATAGTGT CAACTGTTCA AATAAGTCTA GAATCGGATC GTTACAGAGG TCACAGTATC
ATCAAACACC ACATATCAAA TTGACATGGC TGAATTCTGG TTTCTTTATA TGAAGCCATT CCCTCTGTTT CCACAAAAAA
AAAAAATCAA ACTACGGCAT GGTGCTTCTT TCTCTGAGTT TAGTCTATCA AGGTCTGTAA TGTTTTTATG TGAAGCAAAA
CAGTCAAACT TTCATATGAG TTGCATTTTG CGTGATTGTC AGGTTCCTCT GACAGCAACA TTTGCAGATT ATCAGCCCAA
TGGACAAACA CCAATTCCTT GTACAGACAA GAAAATCACT CCTACAGTTC TCAAAGATGG AACTGTCGAG GAATTCTCTG
CCCCAAGGAG GCTAAGAGAA GATGAGATCC CCCAAATTGT TGATGATTTC CGAATTGCTG CTAGGAATTG CATTGAAGCA
GGTACTTCCA TAATCTATGC ATCTTCATAT AACCATTCCC AATATTTTGT TGGCTAAACT GTAGCATTGT ACCATCATAG
TTGTAACTTG CAAGAATTTG GAGTCCAAAT ACTGCTTTTG GCTAGCAGTA ATTTACCTTT TGATGAACTT CACGGTACCA
TCCAACTAGA AGTTTTAATT TGTTACATCC ATGATATTAT AGGCTTTGAC GGAGTTGAAA TCCACTGCGC ATTTGGGTAC
CTAATTGAAC AGTTCATGAA AGATGGTGTC AACGACAGAA CTGACAAGTA CGGAGGAAGC ATCGCAAACC GTTGCCGCTT
TGCTCTAGAG GTAATCCAAG CAGCCATCGA TGAGATCGGA TCGGACAGAG TAGGTGTCCG TCTCTCGCCA TACTCAAACT
GCCTGGACTG TTGGGACTCA GACCCAGATG CACTTGGCCT CTACATGATC CAAGCCATGA GCAAGCTGGG CGTTCTCTAC
TGCAGCATGG TTGAGCCTGA GGTGGTCAAA GTAGACGGCA AGGTGCAGAT TCCTTACAAG CTATGGCACT TCAGGAAAGT
GTTTGCTGGC ACTTTCATCG TCGCTGGAGG ATACAACAGA GAAGAAGGCA ATAGAGCAGT GTCTCAGGGT TACACAGACC
TGGTAGCATA TGGTAAATGG TTCTTGGCAA ACCCGGATCT GCCTAGGCGG TTTGAGCTGA ATGCGCCTCT GAACAAGTAT
GACAGATCGA CGTTCTACAC TTCTGATCCA GTTATCGGGT ACACCGATTA CCCTTTTCTC AGTCCTCTGT GAGTATTGCA
TTTGTTTTAA TTAAGCGAGA AATTGCAATC CATTCCTCAG AGCTCTTGAC TTGGAATCAC AATAAAATTA AATTGATTTG

Locus: Os02g0559400

Loading... No data Feature: Raw Normalized or Cy5/Cy3 Ratio
RXP_0001: Spatio-temporal gene expression of various tissues/organs throughout entire growth in the field RXP_0002: Diurnal and circadian gene expression profile of leaf throughout entire growth RXP_0003: Leaf gene expression profile throughout entire growth in the field (12:00) RXP_0004: Leaf gene expression profile throughout entire growth in the field (00:00) RXP_0005: Leaf gene expression profile during sunrise RXP_0006: Leaf gene expression profile during sunset RXP_0007: Root gene expression profile throughout entire growth in the field (12:00) RXP_0008: Root gene expression profile throughout entire growth in the field (00:00) RXP_0009: Diurnal and circadian gene expression profile of root RXP_0010: Gene expression profile during reproductive organ development RXP_0011: Grain gene expression profile at early developmental stage RXP_0012: Embryo and Endosperm gene expression profile at ripening stage RXP_1001: Root gene expression profile in response to abscisic acid RXP_1006: Shoot gene expression profile in response to abscisic acid RXP_1002: Root gene expression profile in response to gibberellin RXP_1007: Shoot gene expression profile in response to gibberellin RXP_1003: Root gene expression profile in response to auxin RXP_1008: Shoot gene expression profile in response to auxin RXP_1004: Root gene expression profile in response to brassinosteroid RXP_1009: Shoot gene expression profile in response to brassinosteroid RXP_1005: Root gene expression profile in response to cytokinin RXP_1010: Shoot gene expression profile in response to cytokinin RXP_1011: Root gene expression profile in response to jasmonic acid RXP_1012: Shoot gene expression profile in response to jasmonic acid

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Locus: Os02g0559400

Loading... No data Hierarchy: 1 2 3 4    MR or MR rank: 1 2 3 4 5 10 15 1 2 3 4

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