Locus
Os02g0559400
Description
Similar to 12-oxo-phytodienoic acid reductase5.
RAP-DB Gene Symbol Synonym(s)
RAP-DB Gene Name Synonym(s)
CGSNL Gene Symbol
OPR8
CGSNL Gene Name
12-OXOPHYTODIENOATE REDUCTASE 8
Oryzabase Gene Symbol Synonym(s)
OsOPR8, OsOPR7, OsOPR02-1
Oryzabase Gene Name Synonym(s)
12-oxo-phytodienoic acid reductase 8
Transcript Evidence
AK059887 (DDBJ, Best hit)
Protein Evidence
NP_001105909.1 (RefSeq)
Literature
Note
Manual Curation
Gene Ontology (GO)
Biological Process: metabolic process (GO:0008152)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: FMN binding (GO:0010181)
Molecular Function: oxidoreductase activity (GO:0016491)
Functional domain (InterPro)
NADH:flavin oxidoreductase/NADH oxidase, N-terminal (IPR001155)
Aldolase-type TIM barrel (IPR013785)
Full-length cDNA
006-208-B12 (Online Clone Ordering)
Expression Databases
TENOR (Os02t0559400-02)
Others
Oryzabase (8762)
Transcript |
1250 bp |
>Os02t0559400-02 Similar to 12-oxo-phytodienoic acid reductase5. TCTCGATTCTTCTCCACTCGAGCAGAAGACCGGAATCAGCTCCCGTACCCTGTTTGTTAC CCATGGAAGCGAAAATTCCCCTCCTTACTCCTCACACCATGGGGAGATTCCACCTCGCCC ACAGGGTTGTCCATGCGCCGCTGACCAGATCGAGGTGCTACAATAATCTTCCTCAAGAAC ATGTTCAGCTGTACTACTCGCAGAGGGCCACAAATGGCGGCCTTCTGATCGCTGAAGCCA CCGGGGTCTCGGAGACTGCTCAAGGGTATCCAAACACACCGGGTATATGGACAAAGGAGC AGGTGGAAGCTTGGAGGACGGTTGTGGATGCAGTGCATCAGAAGGGTGGTGTTTTCTTCT GCCAAATCTGGCATGTAGGGAGGGCATCTACCAATGATTATCAGCCCAATGGACAAACAC CAATTCCTTGTACAGACAAGAAAATCACTCCTACAGTTCTCAAAGATGGAACTGTCGAGG AATTCTCTGCCCCAAGGAGGCTAAGAGAAGATGAGATCCCCCAAATTGTTGATGATTTCC GAATTGCTGCTAGGAATTGCATTGAAGCAGGCTTTGACGGAGTTGAAATCCACTGCGCAT TTGGGTACCTAATTGAACAGTTCATGAAAGATGGTGTCAACGACAGAACTGACAAGTACG GAGGAAGCATCGCAAACCGTTGCCGCTTTGCTCTAGAGGTAATCCAAGCAGCCATCGATG AGATCGGATCGGACAGAGTAGGTGTCCGTCTCTCGCCATACTCAAACTGCCTGGACTGTT GGGACTCAGACCCAGATGCACTTGGCCTCTACATGATCCAAGCCATGAGCAAGCTGGGCG TTCTCTACTGCAGCATGGTTGAGCCTGAGGTGGTCAAAGTAGACGGCAAGGTGCAGATTC CTTACAAGCTATGGCACTTCAGGAAAGTGTTTGCTGGCACTTTCATCGTCGCTGGAGGAT ACAACAGAGAAGAAGGCAATAGAGCAGTGTCTCAGGGTTACACAGACCTGGTAGCATATG GTAAATGGTTCTTGGCAAACCCGGATCTGCCTAGGCGGTTTGAGCTGAATGCGCCTCTGA ACAAGTATGACAGATCGACGTTCTACACTTCTGATCCAGTTATCGGGTACACCGATTACC CTTTTCTCAGTCCTCTGTGAGTATTGCATTTGTTTTAATTAAGCGAGAAATTGCAATCCA TTCCTCAGAGCTCTTGACTTGGAATCACAATAAAATTAAATTGATTTGGT
CDS |
1098 bp |
>Os02t0559400-02 Similar to 12-oxo-phytodienoic acid reductase5. ATGGAAGCGAAAATTCCCCTCCTTACTCCTCACACCATGGGGAGATTCCACCTCGCCCAC AGGGTTGTCCATGCGCCGCTGACCAGATCGAGGTGCTACAATAATCTTCCTCAAGAACAT GTTCAGCTGTACTACTCGCAGAGGGCCACAAATGGCGGCCTTCTGATCGCTGAAGCCACC GGGGTCTCGGAGACTGCTCAAGGGTATCCAAACACACCGGGTATATGGACAAAGGAGCAG GTGGAAGCTTGGAGGACGGTTGTGGATGCAGTGCATCAGAAGGGTGGTGTTTTCTTCTGC CAAATCTGGCATGTAGGGAGGGCATCTACCAATGATTATCAGCCCAATGGACAAACACCA ATTCCTTGTACAGACAAGAAAATCACTCCTACAGTTCTCAAAGATGGAACTGTCGAGGAA TTCTCTGCCCCAAGGAGGCTAAGAGAAGATGAGATCCCCCAAATTGTTGATGATTTCCGA ATTGCTGCTAGGAATTGCATTGAAGCAGGCTTTGACGGAGTTGAAATCCACTGCGCATTT GGGTACCTAATTGAACAGTTCATGAAAGATGGTGTCAACGACAGAACTGACAAGTACGGA GGAAGCATCGCAAACCGTTGCCGCTTTGCTCTAGAGGTAATCCAAGCAGCCATCGATGAG ATCGGATCGGACAGAGTAGGTGTCCGTCTCTCGCCATACTCAAACTGCCTGGACTGTTGG GACTCAGACCCAGATGCACTTGGCCTCTACATGATCCAAGCCATGAGCAAGCTGGGCGTT CTCTACTGCAGCATGGTTGAGCCTGAGGTGGTCAAAGTAGACGGCAAGGTGCAGATTCCT TACAAGCTATGGCACTTCAGGAAAGTGTTTGCTGGCACTTTCATCGTCGCTGGAGGATAC AACAGAGAAGAAGGCAATAGAGCAGTGTCTCAGGGTTACACAGACCTGGTAGCATATGGT AAATGGTTCTTGGCAAACCCGGATCTGCCTAGGCGGTTTGAGCTGAATGCGCCTCTGAAC AAGTATGACAGATCGACGTTCTACACTTCTGATCCAGTTATCGGGTACACCGATTACCCT TTTCTCAGTCCTCTGTGA
Protein |
365 aa |
>Os02t0559400-02 Similar to 12-oxo-phytodienoic acid reductase5. MEAKIPLLTPHTMGRFHLAHRVVHAPLTRSRCYNNLPQEHVQLYYSQRATNGGLLIAEAT GVSETAQGYPNTPGIWTKEQVEAWRTVVDAVHQKGGVFFCQIWHVGRASTNDYQPNGQTP IPCTDKKITPTVLKDGTVEEFSAPRRLREDEIPQIVDDFRIAARNCIEAGFDGVEIHCAF GYLIEQFMKDGVNDRTDKYGGSIANRCRFALEVIQAAIDEIGSDRVGVRLSPYSNCLDCW DSDPDALGLYMIQAMSKLGVLYCSMVEPEVVKVDGKVQIPYKLWHFRKVFAGTFIVAGGY NREEGNRAVSQGYTDLVAYGKWFLANPDLPRRFELNAPLNKYDRSTFYTSDPVIGYTDYP FLSPL*
5'UTR
chr02:21231220..21231281 (- strand) : 62 bp
CDS
chr02:21231158..21231219 (- strand) : 62 bp
chr02:21230547..21230818 (- strand) : 272 bp
chr02:21229846..21230019 (- strand) : 174 bp
chr02:21229055..21229644 (- strand) : 590 bp
3'UTR
chr02:21228965..21229054 (- strand) : 90 bp
FASTA
>Os02t0559400-02 class=Sequence position=chr02:21228965..21231281 (- strand) TCTCGATTCT TCTCCACTCG AGCAGAAGAC CGGAATCAGC TCCCGTACCC TGTTTGTTAC CCATGGAAGC GAAAATTCCC CTCCTTACTC CTCACACCAT GGGGAGATTC CACCTCGCCC ACAGGTATGT GCTGCTATAT GTCCATCCAT CGCCTTTGGT TTTGTAATAG CAATCGCTCC CTACTTGCTA GGATTCTTCA GCCCTCGAAC TGGATGACGT TAATCGATCA ATCGATTATC TAGATAACAA TTCTTCCTCA TAGTTAAGGT AGTGTCTGGC TACTGCCTAC TGCACTGCGG TTTCAGCTGT TAAGGTTTAG TGCCCTCAAG GTGTTTGATG GATTGCCTCT GAGCCTGGAG GGTGGCTGCC TGGGCGAATC TTGATGTTTG GAGCTAGCTA ACCTCAAGAA ATTTCTCTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTTC CTCTTGGTCT TAGGGTTGTC CATGCGCCGC TGACCAGATC GAGGTGCTAC AATAATCTTC CTCAAGAACA TGTTCAGCTG TACTACTCGC AGAGGGCCAC AAATGGCGGC CTTCTGATCG CTGAAGCCAC CGGGGTCTCG GAGACTGCTC AAGGGTATCC AAACACACCG GGTATATGGA CAAAGGAGCA GGTGGAAGCT TGGAGGACGG TTGTGGATGC AGTGCATCAG AAGGGTGGTG TTTTCTTCTG CCAAATCTGG CATGTAGGGA GGGCATCTAC CAATGGTATT ATTATCCATA TCATTATCTT CCTACAAGTT TGGATATATT GAAATTTTTA TGAATGCGTG TTGCTTGATG AATTTCACTC TTAACTTGGT TATTGCAATG GTAAATTTCA TATGGGATCA ATAAACTGAA GTTTTCTGAG CCTGCTTGAC TTTAATCCTT TCAAAAGCAG TTGTGGCATT TCATCTTGTA GGATAGGACA TTGGAATATT TAGAATATCA GGTTGTTTGC ATGTGAAAAT AGTGTCAACT GTTCAAATAA GTCTAGAATC GGATCGTTAC AGAGGTCACA GTATCATCAA ACACCACATA TCAAATTGAC ATGGCTGAAT TCTGGTTTCT TTATATGAAG CCATTCCCTC TGTTTCCACA AAAAAAAAAA ATCAAACTAC GGCATGGTGC TTCTTTCTCT GAGTTTAGTC TATCAAGGTC TGTAATGTTT TTATGTGAAG CAAAACAGTC AAACTTTCAT ATGAGTTGCA TTTTGCGTGA TTGTCAGGTT CCTCTGACAG CAACATTTGC AGATTATCAG CCCAATGGAC AAACACCAAT TCCTTGTACA GACAAGAAAA TCACTCCTAC AGTTCTCAAA GATGGAACTG TCGAGGAATT CTCTGCCCCA AGGAGGCTAA GAGAAGATGA GATCCCCCAA ATTGTTGATG ATTTCCGAAT TGCTGCTAGG AATTGCATTG AAGCAGGTAC TTCCATAATC TATGCATCTT CATATAACCA TTCCCAATAT TTTGTTGGCT AAACTGTAGC ATTGTACCAT CATAGTTGTA ACTTGCAAGA ATTTGGAGTC CAAATACTGC TTTTGGCTAG CAGTAATTTA CCTTTTGATG AACTTCACGG TACCATCCAA CTAGAAGTTT TAATTTGTTA CATCCATGAT ATTATAGGCT TTGACGGAGT TGAAATCCAC TGCGCATTTG GGTACCTAAT TGAACAGTTC ATGAAAGATG GTGTCAACGA CAGAACTGAC AAGTACGGAG GAAGCATCGC AAACCGTTGC CGCTTTGCTC TAGAGGTAAT CCAAGCAGCC ATCGATGAGA TCGGATCGGA CAGAGTAGGT GTCCGTCTCT CGCCATACTC AAACTGCCTG GACTGTTGGG ACTCAGACCC AGATGCACTT GGCCTCTACA TGATCCAAGC CATGAGCAAG CTGGGCGTTC TCTACTGCAG CATGGTTGAG CCTGAGGTGG TCAAAGTAGA CGGCAAGGTG CAGATTCCTT ACAAGCTATG GCACTTCAGG AAAGTGTTTG CTGGCACTTT CATCGTCGCT GGAGGATACA ACAGAGAAGA AGGCAATAGA GCAGTGTCTC AGGGTTACAC AGACCTGGTA GCATATGGTA AATGGTTCTT GGCAAACCCG GATCTGCCTA GGCGGTTTGA GCTGAATGCG CCTCTGAACA AGTATGACAG ATCGACGTTC TACACTTCTG ATCCAGTTAT CGGGTACACC GATTACCCTT TTCTCAGTCC TCTGTGAGTA TTGCATTTGT TTTAATTAAG CGAGAAATTG CAATCCATTC CTCAGAGCTC TTGACTTGGA ATCACAATAA AATTAAATTG ATTTGGT
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