Os02t0559400-02

Locus

Os02g0559400

Description

Similar to 12-oxo-phytodienoic acid reductase5.

RAP-DB Gene Symbol Synonym(s)

RAP-DB Gene Name Synonym(s)

CGSNL Gene Symbol

OPR8

CGSNL Gene Name

12-OXOPHYTODIENOATE REDUCTASE 8

Oryzabase Gene Symbol Synonym(s)

OsOPR8, OsOPR7, OsOPR02-1

Oryzabase Gene Name Synonym(s)

12-oxo-phytodienoic acid reductase 8

Transcript Evidence

AK059887 (DDBJ, Best hit)

Protein Evidence

NP_001105909.1 (RefSeq)

Literature

Note

Manual Curation

Gene Ontology (GO)

Biological Process: metabolic process (GO:0008152)

Biological Process: oxidation-reduction process (GO:0055114)

Molecular Function: catalytic activity (GO:0003824)

Molecular Function: FMN binding (GO:0010181)

Molecular Function: oxidoreductase activity (GO:0016491)

Functional domain (InterPro)

NADH:flavin oxidoreductase/NADH oxidase, N-terminal (IPR001155)

Aldolase-type TIM barrel (IPR013785)

Full-length cDNA

006-208-B12 (Online Clone Ordering)

Expression Databases

TENOR (Os02t0559400-02)

Others

Oryzabase (8762)

Transcript

1250 bp

>Os02t0559400-02 Similar to 12-oxo-phytodienoic acid reductase5.
TCTCGATTCTTCTCCACTCGAGCAGAAGACCGGAATCAGCTCCCGTACCCTGTTTGTTAC
CCATGGAAGCGAAAATTCCCCTCCTTACTCCTCACACCATGGGGAGATTCCACCTCGCCC
ACAGGGTTGTCCATGCGCCGCTGACCAGATCGAGGTGCTACAATAATCTTCCTCAAGAAC
ATGTTCAGCTGTACTACTCGCAGAGGGCCACAAATGGCGGCCTTCTGATCGCTGAAGCCA
CCGGGGTCTCGGAGACTGCTCAAGGGTATCCAAACACACCGGGTATATGGACAAAGGAGC
AGGTGGAAGCTTGGAGGACGGTTGTGGATGCAGTGCATCAGAAGGGTGGTGTTTTCTTCT
GCCAAATCTGGCATGTAGGGAGGGCATCTACCAATGATTATCAGCCCAATGGACAAACAC
CAATTCCTTGTACAGACAAGAAAATCACTCCTACAGTTCTCAAAGATGGAACTGTCGAGG
AATTCTCTGCCCCAAGGAGGCTAAGAGAAGATGAGATCCCCCAAATTGTTGATGATTTCC
GAATTGCTGCTAGGAATTGCATTGAAGCAGGCTTTGACGGAGTTGAAATCCACTGCGCAT
TTGGGTACCTAATTGAACAGTTCATGAAAGATGGTGTCAACGACAGAACTGACAAGTACG
GAGGAAGCATCGCAAACCGTTGCCGCTTTGCTCTAGAGGTAATCCAAGCAGCCATCGATG
AGATCGGATCGGACAGAGTAGGTGTCCGTCTCTCGCCATACTCAAACTGCCTGGACTGTT
GGGACTCAGACCCAGATGCACTTGGCCTCTACATGATCCAAGCCATGAGCAAGCTGGGCG
TTCTCTACTGCAGCATGGTTGAGCCTGAGGTGGTCAAAGTAGACGGCAAGGTGCAGATTC
CTTACAAGCTATGGCACTTCAGGAAAGTGTTTGCTGGCACTTTCATCGTCGCTGGAGGAT
ACAACAGAGAAGAAGGCAATAGAGCAGTGTCTCAGGGTTACACAGACCTGGTAGCATATG
GTAAATGGTTCTTGGCAAACCCGGATCTGCCTAGGCGGTTTGAGCTGAATGCGCCTCTGA
ACAAGTATGACAGATCGACGTTCTACACTTCTGATCCAGTTATCGGGTACACCGATTACC
CTTTTCTCAGTCCTCTGTGAGTATTGCATTTGTTTTAATTAAGCGAGAAATTGCAATCCA
TTCCTCAGAGCTCTTGACTTGGAATCACAATAAAATTAAATTGATTTGGT

CDS

1098 bp

>Os02t0559400-02 Similar to 12-oxo-phytodienoic acid reductase5.
ATGGAAGCGAAAATTCCCCTCCTTACTCCTCACACCATGGGGAGATTCCACCTCGCCCAC
AGGGTTGTCCATGCGCCGCTGACCAGATCGAGGTGCTACAATAATCTTCCTCAAGAACAT
GTTCAGCTGTACTACTCGCAGAGGGCCACAAATGGCGGCCTTCTGATCGCTGAAGCCACC
GGGGTCTCGGAGACTGCTCAAGGGTATCCAAACACACCGGGTATATGGACAAAGGAGCAG
GTGGAAGCTTGGAGGACGGTTGTGGATGCAGTGCATCAGAAGGGTGGTGTTTTCTTCTGC
CAAATCTGGCATGTAGGGAGGGCATCTACCAATGATTATCAGCCCAATGGACAAACACCA
ATTCCTTGTACAGACAAGAAAATCACTCCTACAGTTCTCAAAGATGGAACTGTCGAGGAA
TTCTCTGCCCCAAGGAGGCTAAGAGAAGATGAGATCCCCCAAATTGTTGATGATTTCCGA
ATTGCTGCTAGGAATTGCATTGAAGCAGGCTTTGACGGAGTTGAAATCCACTGCGCATTT
GGGTACCTAATTGAACAGTTCATGAAAGATGGTGTCAACGACAGAACTGACAAGTACGGA
GGAAGCATCGCAAACCGTTGCCGCTTTGCTCTAGAGGTAATCCAAGCAGCCATCGATGAG
ATCGGATCGGACAGAGTAGGTGTCCGTCTCTCGCCATACTCAAACTGCCTGGACTGTTGG
GACTCAGACCCAGATGCACTTGGCCTCTACATGATCCAAGCCATGAGCAAGCTGGGCGTT
CTCTACTGCAGCATGGTTGAGCCTGAGGTGGTCAAAGTAGACGGCAAGGTGCAGATTCCT
TACAAGCTATGGCACTTCAGGAAAGTGTTTGCTGGCACTTTCATCGTCGCTGGAGGATAC
AACAGAGAAGAAGGCAATAGAGCAGTGTCTCAGGGTTACACAGACCTGGTAGCATATGGT
AAATGGTTCTTGGCAAACCCGGATCTGCCTAGGCGGTTTGAGCTGAATGCGCCTCTGAAC
AAGTATGACAGATCGACGTTCTACACTTCTGATCCAGTTATCGGGTACACCGATTACCCT
TTTCTCAGTCCTCTGTGA

Protein

366 aa

>Os02t0559400-02 Similar to 12-oxo-phytodienoic acid reductase5.
MEAKIPLLTPHTMGRFHLAHRVVHAPLTRSRCYNNLPQEHVQLYYSQRATNGGLLIAEAT
GVSETAQGYPNTPGIWTKEQVEAWRTVVDAVHQKGGVFFCQIWHVGRASTNDYQPNGQTP
IPCTDKKITPTVLKDGTVEEFSAPRRLREDEIPQIVDDFRIAARNCIEAGFDGVEIHCAF
GYLIEQFMKDGVNDRTDKYGGSIANRCRFALEVIQAAIDEIGSDRVGVRLSPYSNCLDCW
DSDPDALGLYMIQAMSKLGVLYCSMVEPEVVKVDGKVQIPYKLWHFRKVFAGTFIVAGGY
NREEGNRAVSQGYTDLVAYGKWFLANPDLPRRFELNAPLNKYDRSTFYTSDPVIGYTDYP
FLSPL*

5'UTR

chr02:21231220..21231281 (- strand) : 62 bp

CDS

chr02:21231158..21231219 (- strand) : 62 bp

chr02:21230547..21230818 (- strand) : 272 bp

chr02:21229846..21230019 (- strand) : 174 bp

chr02:21229055..21229644 (- strand) : 590 bp

3'UTR

chr02:21228965..21229054 (- strand) : 90 bp

FASTA

>Os02t0559400-02 class=Sequence position=chr02:21228965..21231281 (- strand)
TCTCGATTCT TCTCCACTCG AGCAGAAGAC CGGAATCAGC TCCCGTACCC TGTTTGTTAC CCATGGAAGC GAAAATTCCC
CTCCTTACTC CTCACACCAT GGGGAGATTC CACCTCGCCC ACAGGTATGT GCTGCTATAT GTCCATCCAT CGCCTTTGGT
TTTGTAATAG CAATCGCTCC CTACTTGCTA GGATTCTTCA GCCCTCGAAC TGGATGACGT TAATCGATCA ATCGATTATC
TAGATAACAA TTCTTCCTCA TAGTTAAGGT AGTGTCTGGC TACTGCCTAC TGCACTGCGG TTTCAGCTGT TAAGGTTTAG
TGCCCTCAAG GTGTTTGATG GATTGCCTCT GAGCCTGGAG GGTGGCTGCC TGGGCGAATC TTGATGTTTG GAGCTAGCTA
ACCTCAAGAA ATTTCTCTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTTC CTCTTGGTCT TAGGGTTGTC CATGCGCCGC
TGACCAGATC GAGGTGCTAC AATAATCTTC CTCAAGAACA TGTTCAGCTG TACTACTCGC AGAGGGCCAC AAATGGCGGC
CTTCTGATCG CTGAAGCCAC CGGGGTCTCG GAGACTGCTC AAGGGTATCC AAACACACCG GGTATATGGA CAAAGGAGCA
GGTGGAAGCT TGGAGGACGG TTGTGGATGC AGTGCATCAG AAGGGTGGTG TTTTCTTCTG CCAAATCTGG CATGTAGGGA
GGGCATCTAC CAATGGTATT ATTATCCATA TCATTATCTT CCTACAAGTT TGGATATATT GAAATTTTTA TGAATGCGTG
TTGCTTGATG AATTTCACTC TTAACTTGGT TATTGCAATG GTAAATTTCA TATGGGATCA ATAAACTGAA GTTTTCTGAG
CCTGCTTGAC TTTAATCCTT TCAAAAGCAG TTGTGGCATT TCATCTTGTA GGATAGGACA TTGGAATATT TAGAATATCA
GGTTGTTTGC ATGTGAAAAT AGTGTCAACT GTTCAAATAA GTCTAGAATC GGATCGTTAC AGAGGTCACA GTATCATCAA
ACACCACATA TCAAATTGAC ATGGCTGAAT TCTGGTTTCT TTATATGAAG CCATTCCCTC TGTTTCCACA AAAAAAAAAA
ATCAAACTAC GGCATGGTGC TTCTTTCTCT GAGTTTAGTC TATCAAGGTC TGTAATGTTT TTATGTGAAG CAAAACAGTC
AAACTTTCAT ATGAGTTGCA TTTTGCGTGA TTGTCAGGTT CCTCTGACAG CAACATTTGC AGATTATCAG CCCAATGGAC
AAACACCAAT TCCTTGTACA GACAAGAAAA TCACTCCTAC AGTTCTCAAA GATGGAACTG TCGAGGAATT CTCTGCCCCA
AGGAGGCTAA GAGAAGATGA GATCCCCCAA ATTGTTGATG ATTTCCGAAT TGCTGCTAGG AATTGCATTG AAGCAGGTAC
TTCCATAATC TATGCATCTT CATATAACCA TTCCCAATAT TTTGTTGGCT AAACTGTAGC ATTGTACCAT CATAGTTGTA
ACTTGCAAGA ATTTGGAGTC CAAATACTGC TTTTGGCTAG CAGTAATTTA CCTTTTGATG AACTTCACGG TACCATCCAA
CTAGAAGTTT TAATTTGTTA CATCCATGAT ATTATAGGCT TTGACGGAGT TGAAATCCAC TGCGCATTTG GGTACCTAAT
TGAACAGTTC ATGAAAGATG GTGTCAACGA CAGAACTGAC AAGTACGGAG GAAGCATCGC AAACCGTTGC CGCTTTGCTC
TAGAGGTAAT CCAAGCAGCC ATCGATGAGA TCGGATCGGA CAGAGTAGGT GTCCGTCTCT CGCCATACTC AAACTGCCTG
GACTGTTGGG ACTCAGACCC AGATGCACTT GGCCTCTACA TGATCCAAGC CATGAGCAAG CTGGGCGTTC TCTACTGCAG
CATGGTTGAG CCTGAGGTGG TCAAAGTAGA CGGCAAGGTG CAGATTCCTT ACAAGCTATG GCACTTCAGG AAAGTGTTTG
CTGGCACTTT CATCGTCGCT GGAGGATACA ACAGAGAAGA AGGCAATAGA GCAGTGTCTC AGGGTTACAC AGACCTGGTA
GCATATGGTA AATGGTTCTT GGCAAACCCG GATCTGCCTA GGCGGTTTGA GCTGAATGCG CCTCTGAACA AGTATGACAG
ATCGACGTTC TACACTTCTG ATCCAGTTAT CGGGTACACC GATTACCCTT TTCTCAGTCC TCTGTGAGTA TTGCATTTGT
TTTAATTAAG CGAGAAATTG CAATCCATTC CTCAGAGCTC TTGACTTGGA ATCACAATAA AATTAAATTG ATTTGGT

Locus: Os02g0559400

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Locus: Os02g0559400

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