Os02t0811000-01

Locus

Os02g0811000

Description

DUF640 domain containing protein, ALOG domain-containing nuclear protein, Reguration of plant height, floral development and grain yield, Spikelet morphogenesis

RAP-DB Gene Symbol Synonym(s)

G1L6, AFD1, OsG1L6, TH1

RAP-DB Gene Name Synonym(s)

G1 LIKE PROTEIN 6, ABNORMAL FLOWER AND DWARF1, TRIANGULAR HULL1

CGSNL Gene Symbol

BLS1

CGSNL Gene Name

BEAK LIKE SPIKELET 1

Oryzabase Gene Symbol Synonym(s)

OsBLS1, OsG1L6, G1L6, TH1, OsTH1, TH1/BSG1/BLS1/AFD1, BSG1, OsBSG1, AFD1, OsAFD1, BH1, OsBH1

Oryzabase Gene Name Synonym(s)

G1 LIKE PROTEIN 6, TRIANGULAR HULL1, TRIANGULAR HULL 1, BEAK LIKE SPIKELET1, abnormal ower and dwarf1, beak-shaped grain1, BEAK-SHAPED GRAIN 1, ABNORMAL FLOWER AND DWARF 1

Transcript Evidence

AB512495

AK111446

Protein Evidence

Q6K5X1

Literature

PMID: 26486996

PMID: 25224972

PMID: 19901325

Note

Manual Curation

December 3, 2015

Functional domain (InterPro)

ALOG domain (IPR006936)

Full-length cDNA

002-183-B03 (Online Clone Ordering)

Expression Databases

TENOR (Os02t0811000-01)

RiceXPro (AK111446)

Others

Oryzabase (8887)

KEGG (Os02t0811000-01)

Transcript

1587 bp

>Os02t0811000-01 DUF640 domain containing protein, ALOG domain-containing nuclear protein, Reguration of plant height, floral development and grain yield, Spikelet morphogenesis
ATTTCTACCTCACACACCTAGCTAGCAAGTAGGCTCTCTCACTCCACACCCACACTACTC
CTCCCAGGCTGCCTGCCTAAAAGGCTAGACCTATCCATCTCTTCCCCCCACTCCTCCAGC
ATCGCCATCATCCACTGTTCATCCACTCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCCATCGATCCCTGCAGGTTCTTGCTGCTGCTGCTGCTGCCTTGCTTGCTGTCAAGCATG
GCTTGACCACCTGAGAGCGAGGAGAGCATAGCGTAGTACTTGGCTAGCTGCTGTTCAATT
CCTCATGGATGATTGGAGGATCGCTAGCTAGGTCGCCCGGATCCACGGACACCTCTCCTC
GTCTCGTGCTCGTGCATGCCAAGATCGATCGATCCCAGCTGCTGCTGCGAGTGGAGCAGT
GGAGGAGGAGATCGGCTGCTACCTGACCTAGATCGGGAAGCAGATTCATCCGGTTGCATT
ACGGCGGCGAGGCGAGGGCGAGGATGGATCGTCACCATCACCACCACCACCACCACCACC
ATCACATGATGTCGGGCGGCGGGCAAGACCCGGCGGCGGGGGACGGCGGCGCCGGCGGCG
CCACGCAGGACAGCTTCTTCCTCGGCCCGGCCGCGGCCGCCATGTTCTCCGGCGCCGGGT
CGTCGTCGTCGGGCGCGGGGACGTCGGCGGGAGGCGGCGGCGGCGGGCCATCGCCGTCCA
GCTCGTCGCCGTCGCTGAGCCGGTACGAGTCGCAGAAGCGGCGGGACTGGAACACGTTCG
GGCAGTACCTGCGGAACCACCGGCCGCCGCTGTCCCTGTCGCGGTGCAGCGGCGCGCACG
TGCTGGAGTTCCTCAAGTACATGGACCAGTTCGGGAAGACGAAGGTGCACACGCCGGTGT
GCCCCTTCTACGGCCACCCCAACCCGCCGGCGCCATGCCCGTGCCCGCTCCGCCAAGCCT
GGGGCTCCCTCGACGCGCTCATCGGCCGCCTCCGCGCCGCCTACGAGGAGAACGGCGGCA
CGCCGGAGATGAACCCCTTCGGCGCCCGCGCCGTCCgcctctacctgcgcgaggtgcgcg
agacgcaggccagggcgagggggatcagctacgagaagaagaagcgcaagaagccctcgt
ccgccggcgccggagccgggccctcgtccgaggggagcccgccgccacccggcggctcgg
ccagcggcggcggcgacACGTCGGCGTCGCCGCAGTTCATCATCCCGTGAGTTCTTCTCG
ATCCCCATCGCCATCTCCGCATCTCCATTGATCGATCGAGCCTCGCAGCAAGAAATTCCA
ATCTCCTTGGCAGAAATGCCATCTTGCTTTGCCAGTACAAGGCATCATATCTCTTCTTTC
CTCCTGAATTGGTTTCGATCTCTCCCATTTTGCAAAAAAAGATTTCTCCTCTTTTTAATT
TCATCTCTGTCTCGCTTTCTAAGCTAGGACGAAGGTCATGCATGATGATTTCAATTGGTA
GCTTAATTAAGACAGAAACAACATGTGTTATGTGTACTTGTCCTGGGAACAGATTCCATA
TATATGCCAAATGCTTTAATTTGGGCT

CDS

747 bp

>Os02t0811000-01 DUF640 domain containing protein, ALOG domain-containing nuclear protein, Reguration of plant height, floral development and grain yield, Spikelet morphogenesis
ATGGATCGTCACCATCACCACCACCACCACCACCACCATCACATGATGTCGGGCGGCGGG
CAAGACCCGGCGGCGGGGGACGGCGGCGCCGGCGGCGCCACGCAGGACAGCTTCTTCCTC
GGCCCGGCCGCGGCCGCCATGTTCTCCGGCGCCGGGTCGTCGTCGTCGGGCGCGGGGACG
TCGGCGGGAGGCGGCGGCGGCGGGCCATCGCCGTCCAGCTCGTCGCCGTCGCTGAGCCGG
TACGAGTCGCAGAAGCGGCGGGACTGGAACACGTTCGGGCAGTACCTGCGGAACCACCGG
CCGCCGCTGTCCCTGTCGCGGTGCAGCGGCGCGCACGTGCTGGAGTTCCTCAAGTACATG
GACCAGTTCGGGAAGACGAAGGTGCACACGCCGGTGTGCCCCTTCTACGGCCACCCCAAC
CCGCCGGCGCCATGCCCGTGCCCGCTCCGCCAAGCCTGGGGCTCCCTCGACGCGCTCATC
GGCCGCCTCCGCGCCGCCTACGAGGAGAACGGCGGCACGCCGGAGATGAACCCCTTCGGC
GCCCGCGCCGTCCgcctctacctgcgcgaggtgcgcgagacgcaggccagggcgaggggg
atcagctacgagaagaagaagcgcaagaagccctcgtccgccggcgccggagccgggccc
tcgtccgaggggagcccgccgccacccggcggctcggccagcggcggcggcgacACGTCG
GCGTCGCCGCAGTTCATCATCCCGTGA

Protein

248 aa

>Os02t0811000-01 DUF640 domain containing protein, ALOG domain-containing nuclear protein, Reguration of plant height, floral development and grain yield, Spikelet morphogenesis
MDRHHHHHHHHHHHMMSGGGQDPAAGDGGAGGATQDSFFLGPAAAAMFSGAGSSSSGAGT
SAGGGGGGPSPSSSSPSLSRYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYM
DQFGKTKVHTPVCPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGTPEMNPFG
ARAVRLYLREVRETQARARGISYEKKKRKKPSSAGAGAGPSSEGSPPPPGGSASGGGDTS
ASPQFIIP*

5'UTR

chr02:34689252..34689723 (- strand) : 472 bp

chr02:34689124..34689154 (- strand) : 31 bp

CDS

chr02:34688377..34689123 (- strand) : 747 bp

3'UTR

chr02:34688142..34688376 (- strand) : 235 bp

chr02:34687624..34687725 (- strand) : 102 bp

FASTA

>Os02t0811000-01 class=Sequence position=chr02:34687624..34689723 (- strand)
ATTTCTACCT CACACACCTA GCTAGCAAGT AGGCTCTCTC ACTCCACACC CACACTACTC CTCCCAGGCT GCCTGCCTAA
AAGGCTAGAC CTATCCATCT CTTCCCCCCA CTCCTCCAGC ATCGCCATCA TCCACTGTTC ATCCACTCCA TCTCTCTCTC
TCTCTCTCTC TCTCTCTCTC TCCATCGATC CCTGCAGGTT CTTGCTGCTG CTGCTGCTGC CTTGCTTGCT GTCAAGCATG
GCTTGACCAC CTGAGAGCGA GGAGAGCATA GCGTAGTACT TGGCTAGCTG CTGTTCAATT CCTCATGGAT GATTGGAGGA
TCGCTAGCTA GGTCGCCCGG ATCCACGGAC ACCTCTCCTC GTCTCGTGCT CGTGCATGCC AAGATCGATC GATCCCAGCT
GCTGCTGCGA GTGGAGCAGT GGAGGAGGAG ATCGGCTGCT ACCTGACCTA GATCGGGAAG CAGATTCATC CGGTACATGT
TATATATAGA TATAGATCGT TGCTTAGGTT CTTCTCTTCT TGTTTGATTT CGTCGGAGCA AGAAATGATG CTTGCTTCTT
GTGATTCAGG TTGCATTACG GCGGCGAGGC GAGGGCGAGG ATGGATCGTC ACCATCACCA CCACCACCAC CACCACCATC
ACATGATGTC GGGCGGCGGG CAAGACCCGG CGGCGGGGGA CGGCGGCGCC GGCGGCGCCA CGCAGGACAG CTTCTTCCTC
GGCCCGGCCG CGGCCGCCAT GTTCTCCGGC GCCGGGTCGT CGTCGTCGGG CGCGGGGACG TCGGCGGGAG GCGGCGGCGG
CGGGCCATCG CCGTCCAGCT CGTCGCCGTC GCTGAGCCGG TACGAGTCGC AGAAGCGGCG GGACTGGAAC ACGTTCGGGC
AGTACCTGCG GAACCACCGG CCGCCGCTGT CCCTGTCGCG GTGCAGCGGC GCGCACGTGC TGGAGTTCCT CAAGTACATG
GACCAGTTCG GGAAGACGAA GGTGCACACG CCGGTGTGCC CCTTCTACGG CCACCCCAAC CCGCCGGCGC CATGCCCGTG
CCCGCTCCGC CAAGCCTGGG GCTCCCTCGA CGCGCTCATC GGCCGCCTCC GCGCCGCCTA CGAGGAGAAC GGCGGCACGC
CGGAGATGAA CCCCTTCGGC GCCCGCGCCG TCCgcctcta cctgcgcgag gtgcgcgaga cgcaggccag ggcgaggggg
atcagctacg agaagaagaa gcgcaagaag ccctcgtccg ccggcgccgg agccgggccc tcgtccgagg ggagcccgcc
gccacccggc ggctcggcca gcggcggcgg cgacACGTCG GCGTCGCCGC AGTTCATCAT CCCGTGAGTT CTTCTCGATC
CCCATCGCCA TCTCCGCATC TCCATTGATC GATCGAGCCT CGCAGCAAGA AATTCCAATC TCCTTGGCAG AAATGCCATC
TTGCTTTGCC AGTACAAGGC ATCATATCTC TTCTTTCCTC CTGAATTGGT TTCGATCTCT CCCATTTTGC AAAAAAAGAT
TTCTCCTCTT TTTAATTTCA TCTCTGTCTC GCTTTCTAAG CTAGGACGAA GGTCATGCAT GAGTGAGTAC TTAGTTTAAT
TCTTGTTTTT TTCCTTAGCT TTGGGACGTC AATTAATTGG TAGCTGCTGT CTTCGATCGA TCTCGTCCCG TTTGGTTTAA
TTATTTTGAT GCAAGAACTG GAGTAAATTT GATGAGAATC TCAAGCTAGC TAGCCTAATT AGGAGTTGTA ATATTTGTTT
TAGTCTGGGG GATTTGCAAG AACAAAAGTA GCAGAAGCTG TAGGCATAGC AAGCTAGCTA GTGTTAGTAT CTGTAGAATT
TGTTCTTGTA ATAGCTTGTC GCCAAGCTAG CCAAGTGCAG TGGCGTCAGC AATGCTTCCT TCTATCTATC ATGTACTAGT
GATGATGTCT TGGTCTTCCT TTCTTGGTTG AGCAAAAGGG CAAAAAGGGA GAGATCGACT AGCTGATGAG ATGATGAGTG
ATTTCAATTG GTAGCTTAAT TAAGACAGAA ACAACATGTG TTATGTGTAC TTGTCCTGGG AACAGATTCC ATATATATGC
CAAATGCTTT AATTTGGGCT 

Locus: Os02g0811000

Loading...

Locus: Os02g0811000

Loading...