Locus

Os03g0170900

Description

Similar to Sucrose transporter.

RAP-DB Gene Symbol Synonym(s)

RAP-DB Gene Name Synonym(s)

CGSNL Gene Symbol

SUT1

CGSNL Gene Name

SUCROSE TRANSPORTER 1

Oryzabase Gene Symbol Synonym(s)

OsSUT1, OsSUT2

Oryzabase Gene Name Synonym(s)

Sucrose transporter-1, Sucrose transporter 1

Transcript Evidence

AK109355 (DDBJ, Best hit)

Protein Evidence

Q10R54 (UniProt)

Literature

Note

Manual Curation

Functional domain (InterPro)

Major facilitator superfamily domain, general substrate transporter (IPR016196)

Full-length cDNA

006-205-F11 (Online Clone Ordering)

Expression Databases

TENOR (Os03t0170900-02)

RiceXPro (AK109355)

Others

Oryzabase (6297)

KEGG (Os03t0170900-02)

Transcript

1210 bp

>Os03t0170900-02 Similar to Sucrose transporter.
GATTTTCCTGTCCCTGTGCTTGGTTATAACTCTGATATTTGCCAAGGAAGTTCCATTCAA
AGGAAATGCAGCCCTCCCAACAAAATCAAACGAGCCAGCTGAGCCTGAAGGCACTGGTCC
ACTAGCAGTGTTGAAAGGCTTCAGGAACTTACCTACTGGGATGCCTTCTGTGCTTATTGT
GACTGGCCTTACCTGGTTGTCTTGGTTCCCATTCATCCTCTACGACACTGACTGGATGGG
CCGTGAGATCTACCACGGTGACCCAAAGGGAACTGATCCTCAGATCGAGGCTTTCAACCA
GGGTGTCAGGGCAGGTGCATTTGGCCTGCTACTGAATTCGATTGTGCTAGGATTCAGCTC
ATTCTTGATTGAACCAATGTGCCGGAAAGTCGGGCCAAGGGTGGTGTGGGTGACGAGCAA
TTTCCTCGTCTGCATCGCCATGGCTGCAACTGCACTGATCAGCTTCTGGTCACTCAAGGA
CTTCCATGGAACTGTTCAGAAAGCCATCACTGCAGACAAGAGCATCAAGGCTGTCTGCCT
CGTCCTCTTTGCGTTTCTTGGAGTCCCTCTCGCCGTTCTGTACAGTGTTCCCTTCGCAGT
GACGGCGCAATTAGCGGCCACTAGAGGGGGTGGCCAAGGGCTCTGCACCGGCGTCCTCAA
CATCTCCATCGTCATCCCTCAGGTGGTCATCGCGCTGGGAGCCGGGCCGTGGGACGAGCT
GTTCGGGAAGGGGAACATCCCGGCGTTCGGCCTCGCCTCGGGATTCGCGCTCATCGGCGG
CGTCGCCGGAATATTCCTGCTGCCCAAGATCTCCAAGCGCCAGTTCCGGTCGGTCAGCAT
GGGCGGCGGTCACTGACCGCCCCGCTCTCGCCGCCGGCTGCGGCGGCGGCGGCGGCCGGA
GCAGCGCCGCCGGAAGTGGTGAGCTTTGTAGTTCTCGTTTGCAATGGATCAAAGGAGCCC
CCTCTTTTTTTTTACATAGGGTAATTAATTAATTAAGGCTGTTAATTAGGAAGGGGTGAG
GTGGCCCTGCAGCTGGGGCCCACGCTTTGTTGCCACCTCGGTAGAAGAGAATAAGCAGAT
CATGCAGATAATATGGAACTGTAAAACTGTTTTGTGTTGTGTGTGTGTGCAGTGTGCTTG
GTAATTAGTGTGTAATGAATGGTCAGGAGAAGTGCAGTGAACTAAGTGAAAGTGAGCTTC
CATCATCATC

CDS

855 bp

>Os03t0170900-02 Similar to Sucrose transporter.
ATTTTCCTGTCCCTGTGCTTGGTTATAACTCTGATATTTGCCAAGGAAGTTCCATTCAAA
GGAAATGCAGCCCTCCCAACAAAATCAAACGAGCCAGCTGAGCCTGAAGGCACTGGTCCA
CTAGCAGTGTTGAAAGGCTTCAGGAACTTACCTACTGGGATGCCTTCTGTGCTTATTGTG
ACTGGCCTTACCTGGTTGTCTTGGTTCCCATTCATCCTCTACGACACTGACTGGATGGGC
CGTGAGATCTACCACGGTGACCCAAAGGGAACTGATCCTCAGATCGAGGCTTTCAACCAG
GGTGTCAGGGCAGGTGCATTTGGCCTGCTACTGAATTCGATTGTGCTAGGATTCAGCTCA
TTCTTGATTGAACCAATGTGCCGGAAAGTCGGGCCAAGGGTGGTGTGGGTGACGAGCAAT
TTCCTCGTCTGCATCGCCATGGCTGCAACTGCACTGATCAGCTTCTGGTCACTCAAGGAC
TTCCATGGAACTGTTCAGAAAGCCATCACTGCAGACAAGAGCATCAAGGCTGTCTGCCTC
GTCCTCTTTGCGTTTCTTGGAGTCCCTCTCGCCGTTCTGTACAGTGTTCCCTTCGCAGTG
ACGGCGCAATTAGCGGCCACTAGAGGGGGTGGCCAAGGGCTCTGCACCGGCGTCCTCAAC
ATCTCCATCGTCATCCCTCAGGTGGTCATCGCGCTGGGAGCCGGGCCGTGGGACGAGCTG
TTCGGGAAGGGGAACATCCCGGCGTTCGGCCTCGCCTCGGGATTCGCGCTCATCGGCGGC
GTCGCCGGAATATTCCTGCTGCCCAAGATCTCCAAGCGCCAGTTCCGGTCGGTCAGCATG
GGCGGCGGTCACTGA

Protein

284 aa

>Os03t0170900-02 Similar to Sucrose transporter.
IFLSLCLVITLIFAKEVPFKGNAALPTKSNEPAEPEGTGPLAVLKGFRNLPTGMPSVLIV
TGLTWLSWFPFILYDTDWMGREIYHGDPKGTDPQIEAFNQGVRAGAFGLLLNSIVLGFSS
FLIEPMCRKVGPRVVWVTSNFLVCIAMAATALISFWSLKDFHGTVQKAITADKSIKAVCL
VLFAFLGVPLAVLYSVPFAVTAQLAATRGGGQGLCTGVLNISIVIPQVVIALGAGPWDEL
FGKGNIPAFGLASGFALIGGVAGIFLLPKISKRQFRSVSMGGGH*

5'UTR

chr03:3799435..3799435 (- strand) : 1 bp

CDS

chr03:3799240..3799434 (- strand) : 195 bp

chr03:3798978..3799121 (- strand) : 144 bp

chr03:3798635..3798868 (- strand) : 234 bp

chr03:3798469..3798532 (- strand) : 64 bp

chr03:3798342..3798385 (- strand) : 44 bp

chr03:3798052..3798225 (- strand) : 174 bp

3'UTR

chr03:3797698..3798051 (- strand) : 354 bp

FASTA

>Os03t0170900-02 class=Sequence position=chr03:3797698..3799435 (- strand)
GATTTTCCTG TCCCTGTGCT TGGTTATAAC TCTGATATTT GCCAAGGAAG TTCCATTCAA AGGAAATGCA GCCCTCCCAA
CAAAATCAAA CGAGCCAGCT GAGCCTGAAG GCACTGGTCC ACTAGCAGTG TTGAAAGGCT TCAGGAACTT ACCTACTGGG
ATGCCTTCTG TGCTTATTGT GACTGGCCTT ACCTGGGTAT GCAATATACA TCAGAAAAAG AACTTTTCAG ATTATTGAAA
AAATTGCTAC TAGATCATAT CTTAGTTATA TCTTATAGTA CCTTACCTTT TCTATGATAT GATTGTCCTT GTAGTTGTCT
TGGTTCCCAT TCATCCTCTA CGACACTGAC TGGATGGGCC GTGAGATCTA CCACGGTGAC CCAAAGGGAA CTGATCCTCA
GATCGAGGCT TTCAACCAGG GTGTCAGGGC AGGTGCATTT GGCCTGCTAC TGAATTCGGT AAGATCTGAT TGGTTTCTGA
ATTCTGATTG CCACAACTAC TGTCAAATCT TTAACACTCA AGCCATGTTC TTTGGCAGCA ACTAACCATG GGCTTCTGAT
CGTGCAGATT GTGCTAGGAT TCAGCTCATT CTTGATTGAA CCAATGTGCC GGAAAGTCGG GCCAAGGGTG GTGTGGGTGA
CGAGCAATTT CCTCGTCTGC ATCGCCATGG CTGCAACTGC ACTGATCAGC TTCTGGTCAC TCAAGGACTT CCATGGAACT
GTTCAGAAAG CCATCACTGC AGACAAGAGC ATCAAGGCTG TCTGCCTCGT CCTCTTTGCG TTTCTTGGAG TCCCTCTCGC
CGTAAGAATC ACTGACACTT CAACTTAAAC ACATTGCTAA AAAAAATTAT TTCCTCAAGA ATGCCTTATC CTGATGAACT
GTCTGAAAAT TTGCGCGATG CAGGTTCTGT ACAGTGTTCC CTTCGCAGTG ACGGCGCAAT TAGCGGCCAC TAGAGGGGGT
GGCCAAGGTA TGAATCCCAA CATTCTTGCA GCTTTTCTTG ACATAATTCG GTGTTGTTTG GATGCTGGTC TAATCCATGG
CGATCTGCAG GGCTCTGCAC CGGCGTCCTC AACATCTCCA TCGTCATCCC TCAGGTTAAT TAGCTGCCAA ATTCTAATCC
GTTTCCCTTG AAACCGAATC AGATATACTT CATGGATTAT TAGAATTTGA ATGCTCATGG ATTCATGGTT GCGTGGTGTT
CTTCCCTCAG GTGGTCATCG CGCTGGGAGC CGGGCCGTGG GACGAGCTGT TCGGGAAGGG GAACATCCCG GCGTTCGGCC
TCGCCTCGGG ATTCGCGCTC ATCGGCGGCG TCGCCGGAAT ATTCCTGCTG CCCAAGATCT CCAAGCGCCA GTTCCGGTCG
GTCAGCATGG GCGGCGGTCA CTGACCGCCC CGCTCTCGCC GCCGGCTGCG GCGGCGGCGG CGGCCGGAGC AGCGCCGCCG
GAAGTGGTGA GCTTTGTAGT TCTCGTTTGC AATGGATCAA AGGAGCCCCC TCTTTTTTTT TACATAGGGT AATTAATTAA
TTAAGGCTGT TAATTAGGAA GGGGTGAGGT GGCCCTGCAG CTGGGGCCCA CGCTTTGTTG CCACCTCGGT AGAAGAGAAT
AAGCAGATCA TGCAGATAAT ATGGAACTGT AAAACTGTTT TGTGTTGTGT GTGTGTGCAG TGTGCTTGGT AATTAGTGTG
TAATGAATGG TCAGGAGAAG TGCAGTGAAC TAAGTGAAAG TGAGCTTCCA TCATCATC

Locus: Os03g0170900

Loading... No data Feature: Raw Normalized or Cy5/Cy3 Ratio
RXP_0001: Spatio-temporal gene expression of various tissues/organs throughout entire growth in the field RXP_0002: Diurnal and circadian gene expression profile of leaf throughout entire growth RXP_0003: Leaf gene expression profile throughout entire growth in the field (12:00) RXP_0004: Leaf gene expression profile throughout entire growth in the field (00:00) RXP_0005: Leaf gene expression profile during sunrise RXP_0006: Leaf gene expression profile during sunset RXP_0007: Root gene expression profile throughout entire growth in the field (12:00) RXP_0008: Root gene expression profile throughout entire growth in the field (00:00) RXP_0009: Diurnal and circadian gene expression profile of root RXP_0010: Gene expression profile during reproductive organ development RXP_0011: Grain gene expression profile at early developmental stage RXP_0012: Embryo and Endosperm gene expression profile at ripening stage RXP_1001: Root gene expression profile in response to abscisic acid RXP_1006: Shoot gene expression profile in response to abscisic acid RXP_1002: Root gene expression profile in response to gibberellin RXP_1007: Shoot gene expression profile in response to gibberellin RXP_1003: Root gene expression profile in response to auxin RXP_1008: Shoot gene expression profile in response to auxin RXP_1004: Root gene expression profile in response to brassinosteroid RXP_1009: Shoot gene expression profile in response to brassinosteroid RXP_1005: Root gene expression profile in response to cytokinin RXP_1010: Shoot gene expression profile in response to cytokinin RXP_1011: Root gene expression profile in response to jasmonic acid RXP_1012: Shoot gene expression profile in response to jasmonic acid

Link to RiceXPro

Graph view ()

Locus: Os03g0170900

Loading... No data Hierarchy: 1 2 3 4    MR or MR rank: 1 2 3 4 5 10 15 1 2 3 4

Link to RiceFREND

MR list ()

HyperTree ()