Os03t0268200-03

Locus

Os03g0268200

Description

Similar to Protein kinase domain containing protein, expressed.

RAP-DB Gene Symbol Synonym(s)

RAP-DB Gene Name Synonym(s)

CGSNL Gene Symbol

ATG1A

CGSNL Gene Name

AUTOPHAGY ASSOCIATED GENE 1A

Oryzabase Gene Symbol Synonym(s)

OsATG1a

Oryzabase Gene Name Synonym(s)

autophagy 1a

Transcript Evidence

AK121160 (DDBJ, Best hit)

Protein Evidence

Q10NJ0 (UniProt)

Literature

Note

Manual Curation

Gene Ontology (GO)

Biological Process: protein phosphorylation (GO:0006468)

Molecular Function: protein kinase activity (GO:0004672)

Molecular Function: ATP binding (GO:0005524)

Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)

Functional domain (InterPro)

Protein kinase, catalytic domain (IPR000719)

Protein kinase-like domain (IPR011009)

Protein kinase, ATP binding site (IPR017441)

Serine/threonine-protein kinase-like domain (IPR017442)

Full-length cDNA

J023079P09 (Online Clone Ordering)

Expression Databases

TENOR (Os03t0268200-03)

RiceXPro (AK121160)

Others

Oryzabase (9632)

KEGG (Os03t0268200-03 (EC:2.7.11.1))

Transcript

4090 bp

>Os03t0268200-03 Similar to Protein kinase domain containing protein, expressed.
GCGAGTAGAGACCTGGCCCTCCTCCCCTTTTCTCTCTCTGTTCCGCGCGGCGAGATAATT
CGGTTGCTTCTCCCCGCGGCCGCGGCGGCATCTCTCCCGGCGGCGGCGGAGCTCACGTCC
TTCGCGGCGAACTGCGCTCCAGGCAGCGGGACCAGAGGGGATGGGGGACCGCGCCGCGGG
GAGCGGCGGCGGGGGAGGGGGAGGAAGCGGCGTGCGGAGGGTAGGGGACTACGTGCTGGT
GCGGCAGATCGGGTCGGGGGCGTACGCGCGGGTCTGGCTCGGGAAGCACCGCACGCGGGG
CACGGAGGTGGCCTTGAAGGAGATCGCCGTGGAGCGGCTTAGCAGCAAGCTCCGCGAGAG
CCTCCTCTCCGAGGTCGACATCCTCCGGCGCATCCGTCATCCCAACGTCATCGCCCTCCA
CGAGTCCATCAGGGTACCCCGATCCTCGGATCAACGCCCTTCTACTGTTTATATTTTGCG
CAATTGCGTTCGATTTGTTAGGATTTCATGCGGACGGCGACTGTTTATAAACCTCGGATG
AATAAAATCGGGAGTTCTTATAGTCTCTCTTTTAGTTGAATTCTTCTGAGCTTTCTTGGT
ATTCAGATGCCTCAAGCAAAGGAGAACTCATTGGGCTTGACGTTCATTTGGGTGGTGATA
CTATGCAAAGTTTTAACTTAATGCTAGTACCATAGCGTAAGTTGTTTAACTTTGGATGTT
TGTTCGCTGGCTGTGGAAGCAAAACATTAAAATTCCAAATTTGGTAACTTGTTTGTTTTG
GATATATTTTCTGGTGGAATTTAGGAAACTATACCATTAGTTGTTCCCTCCTTAGAGTTC
AAAAGCATACCTAACATGTTTAATTATGCCTCCGATATTAATATTTCTAGGTGTTCCACG
AAAGGGAAGCTTCCCTCTAGGGAGATTGTTGGACATAATTATTTCTTCACTCTCATATCT
AACTATTATTTGCGTATCTCTTTGTTATTTGATGATTTTAGGATGGTGGGAAAATATATC
TTGTATTAGAGTACTGTCGAGGTGGTGACTTACACTCATACCTTCAGCAGCATAAAAGGG
TTTCTGAAACAGTTGCTAAGCATTTCATCCAGCAGCTAGGCAAGCACTTTCTCAGACCCT
CAGTGTCTTGCACTATTTATTGCTTTATCTCTCCCCAGAGCCAAAATCACATTCTCTTCT
TTATGCAGCATCTGGTCTGCAGATGCTGCGTGAAAACAACGTGGTTCATCGAGATCTAAA
ACCACAGGTTAAATTATTTAATTTACTGTTATTGAGTGGATATTTCCATTATATCTTCAT
ATTTAATGACAAAGAATTGATGAAAGAAACGGAATTTCCTGACATTTTGTTTTGTTTTCT
ATCCTGAATTTGTGGCTGTTCAAATAGAACATTCTTCTAGTTGCAAATAATGAAAATTCC
CTCTTGAAGATTGCGGACTTTGGATTTGCAAAGTAAGTTACTTATGTTTGATTGCTTTTA
TTTTGGAGTTATATTATCTTATTTTCCACATGGCCTTTTTTATTGAGTTTATCAGCAATG
AGTTTGATACCTGGTTTAAGAATCCCCTAATAGGTCTGTAGAAATCGCTCCTACCTGAAA
TGAAATTGCAGTATTGTGAAAGAAACGGTGTTGTGCATTTTAAAATGGAATAACTTCTCA
AGAAGTTCTGAAAAAAATACAGTCAATTTGCACTATTTCAAAAGAAAAGGTGCATCATTT
GAAAGTCTCATCTTCATGTCTTGAAAGATGTTAGAGACATTCCATTTAAAGAATGAAATA
TTATGTGCATCACTTTTTAGGCCCCCTTCAGGATTTGGCTCCACAACTACAGCATGCCTT
CATTGTTACAAAAAAATATTTCATGTACCAATACACCTATGTCGCATATGTATTACTCCA
ATTAAGCTATCATTGTTACAAAAAAAAAAGCTATCTTGAGTCCAATTAATTCTCTACACT
CAATTCTACTTTTTTTTATTGAACAGTCCTACTCCGTAATGTAATGTCCTTTGAATTCAC
ACAGAGTTTTACACAAAAATCTGTGCATAAAAGCTAAGTACGAAACATTCTTGAGGACAA
CTAGATAAGTATCGTGCAGGGAAAGAGAATAAGATCATGTTGCTTTGTGCTTGATCCTGT
GTTTCTCTGCTTCCTTGCATATTTAATTACAGCCATGACAAAATTGGCACCTCAGCTTTC
TCTCTGCTTCTCATTCATCGATGGTTGGATCAAGTGAGGCTTGGTGGGAGGGTTAGACGC
GGATAGTATCAGAAATGTGTACTTACCTTTTCTATTCTTGCAAGCAGGTTTTTAGAACCT
TCTTCTCTGGCTGAAACACTTTGCGGTTCACCGCTTTACATGGCTCCAGAAGTCATGCAA
GCTCAGAAGTATGATGCAAAGGTCAGGGCTTTTTTCTGCTTCCTTGTGAGCTTTATCATG
TACTTTTACCTGTTCTTGACTCGTGCTTCATGCCCGATTTCTGACAGAACAGGCAGATTT
GTGGAGTGTTGGTATAATTCTATATCAACTTGTTACCGGATCTCCTCCTTTTACCGGGGA
TAGTCAAATCCAGGTTTATTCAAATTTTCCACATGACCTGATTTCTAGTGCATTATTAAA
TCAGGCTACTACTGAAAAATGTTATTTCCCATCAGTTGCTGAGAAATATACTCAATACAC
GAGAAATACGATTTCCATCTGATTGCGACTTGAGCCATGGCTGCATTGACTTATGCAGAA
AGTTACTGCGAATCAATTCAGGTACGAATCCTCTGCTACACTTATGTATAGTTATATATA
AAAACAAGTTTCATAAGACTTCCACATGTCATTATTTTTTCTTACATCCTTACCAGGAAG
GGTAAAATTTTCCAGAATTATACTGTGACATGACTGATATTACGCCAAAGAAAAACATGA
ATGACTATCATGCAAGAGTAGACTTGGGTGGGTGACATTGTAATTAGTCCCTGTTTTCTC
ACCTATATTATTCACATGTGACCTTCTAGATGTAGTCTTGTAATCAGTATGTCTTACATG
AAGACAGCTTAGAGATTTATTCGTGCTAGAAAAAAAAAAGGTTCTGCGTGTATAAAGCTG
TTGCAGGAAATATGTTACACTCCATGGCATGCAGCAGGACACAACTCATGAACTATGCTG
CACCCAAGGAAGTTTATATATTTGGTTGCTTCTCAGTAGTTTATCTGATCAACAATGTGT
TAGAAGCCATTGCAGTTGTATGGTTTCTTCACTCGATCAGTTTATACCACTGCTTACTGT
CTGTCATAATCCTGAAACCCTGTGGGCTGTCGCACTTATAAAGCAACTTAAGTTTGTTCA
AAAGTAGCAGATTAACTATCACTTTACATGATTATTGTTATGCTGACGTTACAAGTGAGA
ATTAATACTTAATGATTCTGTGCCAATATTAATGCAGTGGAACGCCTTACCGTTGAAGAG
TTTGTGAACCATCCATTTCTCGCTGAACATGCTTTGGAGAGAACCTTGAGGTAATATATT
CTTTGCTATAGTTTTACTTCTACAGCATCACGTGACATGTTTGATATTCTGTATTGCATT
GACAGCCGGACACCATCGGACATAAGAGATGGCTTTCCATTCATTAATAGCAGTCCTACG
AGACCTTCAAGCCAAAGTTCTCAGGAAGATTGTATGCCTTTTCCTTTGGATGATGAGTCA
ACTGGACAGGATGAAGGTCCTGTTTCTGATAGTAAGAGTGCAATAAAATCCTATGGGTTT
GCCACGAGTAAAAGGCTTGATAAAACTTCAGGTCAGAGTCCAACGAAACATTCAAGTCTG
GTCTCTAAATATATTAGGGGAAATAATTACGCATCTAGTAGTCAACGCCTGGACCATCCT
AGGAGAATCAAGGAAAACAAGGGTGATGAAGGGCACAACCCTAAAGGTGGTTATCCAGAA
GGTATTGCAGTCTGTTGTGACTATCACATGTTTCATTATAATTGTGAAAAAGTTCTTACT
AAATTTGTTATTTCCTTACTTGTAAATGTAGATTCCCCTATCATTGATTCATTAGAGTTT
GTAGATCAGG

CDS

381 bp

>Os03t0268200-03 Similar to Protein kinase domain containing protein, expressed.
ATGGGGGACCGCGCCGCGGGGAGCGGCGGCGGGGGAGGGGGAGGAAGCGGCGTGCGGAGG
GTAGGGGACTACGTGCTGGTGCGGCAGATCGGGTCGGGGGCGTACGCGCGGGTCTGGCTC
GGGAAGCACCGCACGCGGGGCACGGAGGTGGCCTTGAAGGAGATCGCCGTGGAGCGGCTT
AGCAGCAAGCTCCGCGAGAGCCTCCTCTCCGAGGTCGACATCCTCCGGCGCATCCGTCAT
CCCAACGTCATCGCCCTCCACGAGTCCATCAGGGTACCCCGATCCTCGGATCAACGCCCT
TCTACTGTTTATATTTTGCGCAATTGCGTTCGATTTGTTAGGATTTCATGCGGACGGCGA
CTGTTTATAAACCTCGGATGA

Protein

126 aa

>Os03t0268200-03 Similar to Protein kinase domain containing protein, expressed.
MGDRAAGSGGGGGGGSGVRRVGDYVLVRQIGSGAYARVWLGKHRTRGTEVALKEIAVERL
SSKLRESLLSEVDILRRIRHPNVIALHESIRVPRSSDQRPSTVYILRNCVRFVRISCGRR
LFINLG*

5'UTR

chr03:8901820..8901979 (- strand) : 160 bp

CDS

chr03:8901439..8901819 (- strand) : 381 bp

3'UTR

chr03:8897890..8901438 (- strand) : 3549 bp

FASTA

>Os03t0268200-03 class=Sequence position=chr03:8897890..8901979 (- strand)
GCGAGTAGAG ACCTGGCCCT CCTCCCCTTT TCTCTCTCTG TTCCGCGCGG CGAGATAATT CGGTTGCTTC TCCCCGCGGC
CGCGGCGGCA TCTCTCCCGG CGGCGGCGGA GCTCACGTCC TTCGCGGCGA ACTGCGCTCC AGGCAGCGGG ACCAGAGGGG
ATGGGGGACC GCGCCGCGGG GAGCGGCGGC GGGGGAGGGG GAGGAAGCGG CGTGCGGAGG GTAGGGGACT ACGTGCTGGT
GCGGCAGATC GGGTCGGGGG CGTACGCGCG GGTCTGGCTC GGGAAGCACC GCACGCGGGG CACGGAGGTG GCCTTGAAGG
AGATCGCCGT GGAGCGGCTT AGCAGCAAGC TCCGCGAGAG CCTCCTCTCC GAGGTCGACA TCCTCCGGCG CATCCGTCAT
CCCAACGTCA TCGCCCTCCA CGAGTCCATC AGGGTACCCC GATCCTCGGA TCAACGCCCT TCTACTGTTT ATATTTTGCG
CAATTGCGTT CGATTTGTTA GGATTTCATG CGGACGGCGA CTGTTTATAA ACCTCGGATG AATAAAATCG GGAGTTCTTA
TAGTCTCTCT TTTAGTTGAA TTCTTCTGAG CTTTCTTGGT ATTCAGATGC CTCAAGCAAA GGAGAACTCA TTGGGCTTGA
CGTTCATTTG GGTGGTGATA CTATGCAAAG TTTTAACTTA ATGCTAGTAC CATAGCGTAA GTTGTTTAAC TTTGGATGTT
TGTTCGCTGG CTGTGGAAGC AAAACATTAA AATTCCAAAT TTGGTAACTT GTTTGTTTTG GATATATTTT CTGGTGGAAT
TTAGGAAACT ATACCATTAG TTGTTCCCTC CTTAGAGTTC AAAAGCATAC CTAACATGTT TAATTATGCC TCCGATATTA
ATATTTCTAG GTGTTCCACG AAAGGGAAGC TTCCCTCTAG GGAGATTGTT GGACATAATT ATTTCTTCAC TCTCATATCT
AACTATTATT TGCGTATCTC TTTGTTATTT GATGATTTTA GGATGGTGGG AAAATATATC TTGTATTAGA GTACTGTCGA
GGTGGTGACT TACACTCATA CCTTCAGCAG CATAAAAGGG TTTCTGAAAC AGTTGCTAAG CATTTCATCC AGCAGCTAGG
CAAGCACTTT CTCAGACCCT CAGTGTCTTG CACTATTTAT TGCTTTATCT CTCCCCAGAG CCAAAATCAC ATTCTCTTCT
TTATGCAGCA TCTGGTCTGC AGATGCTGCG TGAAAACAAC GTGGTTCATC GAGATCTAAA ACCACAGGTT AAATTATTTA
ATTTACTGTT ATTGAGTGGA TATTTCCATT ATATCTTCAT ATTTAATGAC AAAGAATTGA TGAAAGAAAC GGAATTTCCT
GACATTTTGT TTTGTTTTCT ATCCTGAATT TGTGGCTGTT CAAATAGAAC ATTCTTCTAG TTGCAAATAA TGAAAATTCC
CTCTTGAAGA TTGCGGACTT TGGATTTGCA AAGTAAGTTA CTTATGTTTG ATTGCTTTTA TTTTGGAGTT ATATTATCTT
ATTTTCCACA TGGCCTTTTT TATTGAGTTT ATCAGCAATG AGTTTGATAC CTGGTTTAAG AATCCCCTAA TAGGTCTGTA
GAAATCGCTC CTACCTGAAA TGAAATTGCA GTATTGTGAA AGAAACGGTG TTGTGCATTT TAAAATGGAA TAACTTCTCA
AGAAGTTCTG AAAAAAATAC AGTCAATTTG CACTATTTCA AAAGAAAAGG TGCATCATTT GAAAGTCTCA TCTTCATGTC
TTGAAAGATG TTAGAGACAT TCCATTTAAA GAATGAAATA TTATGTGCAT CACTTTTTAG GCCCCCTTCA GGATTTGGCT
CCACAACTAC AGCATGCCTT CATTGTTACA AAAAAATATT TCATGTACCA ATACACCTAT GTCGCATATG TATTACTCCA
ATTAAGCTAT CATTGTTACA AAAAAAAAAG CTATCTTGAG TCCAATTAAT TCTCTACACT CAATTCTACT TTTTTTTATT
GAACAGTCCT ACTCCGTAAT GTAATGTCCT TTGAATTCAC ACAGAGTTTT ACACAAAAAT CTGTGCATAA AAGCTAAGTA
CGAAACATTC TTGAGGACAA CTAGATAAGT ATCGTGCAGG GAAAGAGAAT AAGATCATGT TGCTTTGTGC TTGATCCTGT
GTTTCTCTGC TTCCTTGCAT ATTTAATTAC AGCCATGACA AAATTGGCAC CTCAGCTTTC TCTCTGCTTC TCATTCATCG
ATGGTTGGAT CAAGTGAGGC TTGGTGGGAG GGTTAGACGC GGATAGTATC AGAAATGTGT ACTTACCTTT TCTATTCTTG
CAAGCAGGTT TTTAGAACCT TCTTCTCTGG CTGAAACACT TTGCGGTTCA CCGCTTTACA TGGCTCCAGA AGTCATGCAA
GCTCAGAAGT ATGATGCAAA GGTCAGGGCT TTTTTCTGCT TCCTTGTGAG CTTTATCATG TACTTTTACC TGTTCTTGAC
TCGTGCTTCA TGCCCGATTT CTGACAGAAC AGGCAGATTT GTGGAGTGTT GGTATAATTC TATATCAACT TGTTACCGGA
TCTCCTCCTT TTACCGGGGA TAGTCAAATC CAGGTTTATT CAAATTTTCC ACATGACCTG ATTTCTAGTG CATTATTAAA
TCAGGCTACT ACTGAAAAAT GTTATTTCCC ATCAGTTGCT GAGAAATATA CTCAATACAC GAGAAATACG ATTTCCATCT
GATTGCGACT TGAGCCATGG CTGCATTGAC TTATGCAGAA AGTTACTGCG AATCAATTCA GGTACGAATC CTCTGCTACA
CTTATGTATA GTTATATATA AAAACAAGTT TCATAAGACT TCCACATGTC ATTATTTTTT CTTACATCCT TACCAGGAAG
GGTAAAATTT TCCAGAATTA TACTGTGACA TGACTGATAT TACGCCAAAG AAAAACATGA ATGACTATCA TGCAAGAGTA
GACTTGGGTG GGTGACATTG TAATTAGTCC CTGTTTTCTC ACCTATATTA TTCACATGTG ACCTTCTAGA TGTAGTCTTG
TAATCAGTAT GTCTTACATG AAGACAGCTT AGAGATTTAT TCGTGCTAGA AAAAAAAAAG GTTCTGCGTG TATAAAGCTG
TTGCAGGAAA TATGTTACAC TCCATGGCAT GCAGCAGGAC ACAACTCATG AACTATGCTG CACCCAAGGA AGTTTATATA
TTTGGTTGCT TCTCAGTAGT TTATCTGATC AACAATGTGT TAGAAGCCAT TGCAGTTGTA TGGTTTCTTC ACTCGATCAG
TTTATACCAC TGCTTACTGT CTGTCATAAT CCTGAAACCC TGTGGGCTGT CGCACTTATA AAGCAACTTA AGTTTGTTCA
AAAGTAGCAG ATTAACTATC ACTTTACATG ATTATTGTTA TGCTGACGTT ACAAGTGAGA ATTAATACTT AATGATTCTG
TGCCAATATT AATGCAGTGG AACGCCTTAC CGTTGAAGAG TTTGTGAACC ATCCATTTCT CGCTGAACAT GCTTTGGAGA
GAACCTTGAG GTAATATATT CTTTGCTATA GTTTTACTTC TACAGCATCA CGTGACATGT TTGATATTCT GTATTGCATT
GACAGCCGGA CACCATCGGA CATAAGAGAT GGCTTTCCAT TCATTAATAG CAGTCCTACG AGACCTTCAA GCCAAAGTTC
TCAGGAAGAT TGTATGCCTT TTCCTTTGGA TGATGAGTCA ACTGGACAGG ATGAAGGTCC TGTTTCTGAT AGTAAGAGTG
CAATAAAATC CTATGGGTTT GCCACGAGTA AAAGGCTTGA TAAAACTTCA GGTCAGAGTC CAACGAAACA TTCAAGTCTG
GTCTCTAAAT ATATTAGGGG AAATAATTAC GCATCTAGTA GTCAACGCCT GGACCATCCT AGGAGAATCA AGGAAAACAA
GGGTGATGAA GGGCACAACC CTAAAGGTGG TTATCCAGAA GGTATTGCAG TCTGTTGTGA CTATCACATG TTTCATTATA
ATTGTGAAAA AGTTCTTACT AAATTTGTTA TTTCCTTACT TGTAAATGTA GATTCCCCTA TCATTGATTC ATTAGAGTTT
GTAGATCAGG 

Locus: Os03g0268200

Loading...

Locus: Os03g0268200

Loading...