Locus

Os03g0607200

Description

Gibberellin regulated protein family protein.

RAP-DB Gene Symbol Synonym(s)

RAP-DB Gene Name Synonym(s)

CGSNL Gene Symbol

CGSNL Gene Name

Oryzabase Gene Symbol Synonym(s)

Oryzabase Gene Name Synonym(s)

Transcript Evidence

AK070268 (DDBJ, Best hit)

Protein Evidence

C8C4P9 (UniProt)

Literature

Note

Manual Curation

Functional domain (InterPro)

Gibberellin regulated protein (IPR003854)

Full-length cDNA

J023044E14 (Online Clone Ordering)

Expression Databases

TENOR (Os03t0607200-01)

RiceXPro (AK070268)

Others

KEGG (Os03t0607200-01)

Transcript

772 bp

>Os03t0607200-01 Gibberellin regulated protein family protein.
GCATATTTGCTTTGCTCCCCTTCCACGACTTTAGCCATCTTGGCTTGCAAGGTGAGAAGA
GCAGATCGATCGAGCTGAGAGCTGGTCTCAGGTGTGTGTTGCGTGAGTGTGTTCGAAGAC
GAACGATGAAGACCCGCCGGGCCGCGCTGCTAATGCTTCTCCTCCTGGTGGTGGTGGCGG
CCGCCTCGTGGCCGCAGCCTTGCGACGCTGCTTCAGGGTTCTGCGGGAGCAAGTGCGCGG
TGCGGTGCGGGAGGGGGAGGGGGCGGGGGAGCGGGTGCCTGAGGTCGTGCGGGCTGTGCT
GCGAGGAGTGCAACTGCGTGCCCACGGGGAGTGGGTCGACGCGCGACGAGTGCCCCTGCT
ACCGCGACATGCTCACCGCCGGCCCCAGGAAGAGGCCCAAGTGCCCCTGAATCCTCCCCA
TCCATCTCCATCTCATCGATTACCATCAACTTCATCTCATTTTCTTGTACTTGAAATTAG
CTACTAGTACGTGGTTGTGTATACGTCGCAGGTGTGTATGTATGTATGTATATATATGCG
TATGTTGTCATGCTGCGTAGTTATAGTTAGTAGTCCTACCTACTCCAGTACGTACGTGTT
GATGCCTGTTAATATGGCTGTATGGCTAGCTAAGCTGTGTGCCTGTGTCGATTTGTAAAG
TTGTACTAGTAGGTAGTTGTACTACTTGCAGCGCACGTACTGTTTGTTTGTCTGTTGTTA
AATTTCGTGTTAACTATGAACAGGGGATATGCCGTATGCGCTTTACCTGAGG

CDS

285 bp

>Os03t0607200-01 Gibberellin regulated protein family protein.
ATGAAGACCCGCCGGGCCGCGCTGCTAATGCTTCTCCTCCTGGTGGTGGTGGCGGCCGCC
TCGTGGCCGCAGCCTTGCGACGCTGCTTCAGGGTTCTGCGGGAGCAAGTGCGCGGTGCGG
TGCGGGAGGGGGAGGGGGCGGGGGAGCGGGTGCCTGAGGTCGTGCGGGCTGTGCTGCGAG
GAGTGCAACTGCGTGCCCACGGGGAGTGGGTCGACGCGCGACGAGTGCCCCTGCTACCGC
GACATGCTCACCGCCGGCCCCAGGAAGAGGCCCAAGTGCCCCTGA

Protein

94 aa

>Os03t0607200-01 Gibberellin regulated protein family protein.
MKTRRAALLMLLLLVVVAAASWPQPCDAASGFCGSKCAVRCGRGRGRGSGCLRSCGLCCE
ECNCVPTGSGSTRDECPCYRDMLTAGPRKRPKCP*

5'UTR

chr03:22817650..22817774 (- strand) : 125 bp

CDS

chr03:22817559..22817649 (- strand) : 91 bp

chr03:22817295..22817488 (- strand) : 194 bp

3'UTR

chr03:22816933..22817294 (- strand) : 362 bp

FASTA

>Os03t0607200-01 class=Sequence position=chr03:22816933..22817774 (- strand)
GCATATTTGC TTTGCTCCCC TTCCACGACT TTAGCCATCT TGGCTTGCAA GGTGAGAAGA GCAGATCGAT CGAGCTGAGA
GCTGGTCTCA GGTGTGTGTT GCGTGAGTGT GTTCGAAGAC GAACGATGAA GACCCGCCGG GCCGCGCTGC TAATGCTTCT
CCTCCTGGTG GTGGTGGCGG CCGCCTCGTG GCCGCAGCCT TGCGACGCTG CTTCAGGTAA CCGATCGATT TGTGAGTTTG
CGATGCGTGC GTGGTGCCGT TGCCTACAAA TTGGCGTTTG CTGCAGGGTT CTGCGGGAGC AAGTGCGCGG TGCGGTGCGG
GAGGGGGAGG GGGCGGGGGA GCGGGTGCCT GAGGTCGTGC GGGCTGTGCT GCGAGGAGTG CAACTGCGTG CCCACGGGGA
GTGGGTCGAC GCGCGACGAG TGCCCCTGCT ACCGCGACAT GCTCACCGCC GGCCCCAGGA AGAGGCCCAA GTGCCCCTGA
ATCCTCCCCA TCCATCTCCA TCTCATCGAT TACCATCAAC TTCATCTCAT TTTCTTGTAC TTGAAATTAG CTACTAGTAC
GTGGTTGTGT ATACGTCGCA GGTGTGTATG TATGTATGTA TATATATGCG TATGTTGTCA TGCTGCGTAG TTATAGTTAG
TAGTCCTACC TACTCCAGTA CGTACGTGTT GATGCCTGTT AATATGGCTG TATGGCTAGC TAAGCTGTGT GCCTGTGTCG
ATTTGTAAAG TTGTACTAGT AGGTAGTTGT ACTACTTGCA GCGCACGTAC TGTTTGTTTG TCTGTTGTTA AATTTCGTGT
TAACTATGAA CAGGGGATAT GCCGTATGCG CTTTACCTGA GG

Locus: Os03g0607200

Loading... No data Feature: Raw Normalized or Cy5/Cy3 Ratio
RXP_0001: Spatio-temporal gene expression of various tissues/organs throughout entire growth in the field RXP_0002: Diurnal and circadian gene expression profile of leaf throughout entire growth RXP_0003: Leaf gene expression profile throughout entire growth in the field (12:00) RXP_0004: Leaf gene expression profile throughout entire growth in the field (00:00) RXP_0005: Leaf gene expression profile during sunrise RXP_0006: Leaf gene expression profile during sunset RXP_0007: Root gene expression profile throughout entire growth in the field (12:00) RXP_0008: Root gene expression profile throughout entire growth in the field (00:00) RXP_0009: Diurnal and circadian gene expression profile of root RXP_0010: Gene expression profile during reproductive organ development RXP_0011: Grain gene expression profile at early developmental stage RXP_0012: Embryo and Endosperm gene expression profile at ripening stage RXP_1001: Root gene expression profile in response to abscisic acid RXP_1006: Shoot gene expression profile in response to abscisic acid RXP_1002: Root gene expression profile in response to gibberellin RXP_1007: Shoot gene expression profile in response to gibberellin RXP_1003: Root gene expression profile in response to auxin RXP_1008: Shoot gene expression profile in response to auxin RXP_1004: Root gene expression profile in response to brassinosteroid RXP_1009: Shoot gene expression profile in response to brassinosteroid RXP_1005: Root gene expression profile in response to cytokinin RXP_1010: Shoot gene expression profile in response to cytokinin RXP_1011: Root gene expression profile in response to jasmonic acid RXP_1012: Shoot gene expression profile in response to jasmonic acid

Link to RiceXPro

Graph view ()

Locus: Os03g0607200

Loading... No data Hierarchy: 1 2 3 4    MR or MR rank: 1 2 3 4 5 10 15 1 2 3 4

Link to RiceFREND

MR list ()

HyperTree ()