Locus
Os03g0760800
Description
A member of the GAST (gibberellin (GA)-Stimulated Transcript) family, Control of seedling growth and α-amylase expression, Cell proliferation in meristems and panicles development
RAP-DB Gene Symbol Synonym(s)
GASR1, OsGASR1
RAP-DB Gene Name Synonym(s)
GA Stimulated Rice 1, GA-stimulated transcript-related gene 1
CGSNL Gene Symbol
CGSNL Gene Name
Oryzabase Gene Symbol Synonym(s)
OsGASR1, GASR1
Oryzabase Gene Name Synonym(s)
GAST (GA-stimulated transcript) homolog 1, GAST homolog 1, GA-stimulated transcript homolog 1, GA-stimulated transcript-related gene 1
Transcript Evidence
Protein Evidence
Literature
PMID: 28482332
PMID: 16905871
Note
Manual Curation
June 14, 2017
Functional domain (InterPro)
Gibberellin regulated protein (IPR003854)
Experimentally confirmed subcellular location
apoplast (GO:0048046)
cell wall (GO:0005618)
Full-length cDNA
J023113B01 (Online Clone Ordering)
Expression Databases
TENOR (Os03t0760800-01)
RiceXPro (AK121316)
Others
Oryzabase (14271)
KEGG (Os03t0760800-01)
Transcript |
698 bp |
>Os03t0760800-01 A member of the GAST (gibberellin (GA)-Stimulated Transcript) family, Control of seedling growth and α-amylase expression, Cell proliferation in meristems and panicles development ACTCTCCACAACACCCCAACTCTGAAGCTGCTTGCTTGGAGTCTAGGACCAGCATTCACA AGCACAATGAAGCTCAACACCACCACCACCCTGGCTCTCCTCCTGCTCCTGCTCTTGGCC TCCTCTTCCCTCCAAGTTTCCATGGCTGGATCAGATTTCTGCGACGGCAAGTGCAAGGTG AGGTGCTCGAAGGCGAGCAGGCACGACGACTGCCTCAAGTACTGCGGCGTGTGCTGCGCC TCCTGCAACTGCGTGCCGTCGGGGACGGCCGGCAACAAGGACGAGTGCCCCTGCTACCGC GACATGACCACCGGCCATGGCGCTCGCAAGAGGCCCAAGTGCCCATGATCATTTTTGCAT TATGCATGCTACATGATGCTTAGCCATCATCCGTAGTTGCTTTGCATGCATGATGCATGC TCATGATCGAGATGGAGTAGTAGATATATGCATATGCTTGCCATGATCGATCGTATGGAC CATGCAAAGTATGCTTGTTTGTGTGAGGATCGACTCGATCTTGAGTCTTTCCATGTTCTT GGTTTTCTTTTTTTACTGCTAGTTAATTACTATGGAGTACATGTGAATATGACATCGGAT ATGTAATGTATACATGCATGCCTGGTGATAATAATGGTGTGTGTGCTGTAATAAAGTGTT GGCTTAATTGGTGTAGTACATGTTCAGTTTAGTGTGCC
CDS |
282 bp |
>Os03t0760800-01 A member of the GAST (gibberellin (GA)-Stimulated Transcript) family, Control of seedling growth and α-amylase expression, Cell proliferation in meristems and panicles development ATGAAGCTCAACACCACCACCACCCTGGCTCTCCTCCTGCTCCTGCTCTTGGCCTCCTCT TCCCTCCAAGTTTCCATGGCTGGATCAGATTTCTGCGACGGCAAGTGCAAGGTGAGGTGC TCGAAGGCGAGCAGGCACGACGACTGCCTCAAGTACTGCGGCGTGTGCTGCGCCTCCTGC AACTGCGTGCCGTCGGGGACGGCCGGCAACAAGGACGAGTGCCCCTGCTACCGCGACATG ACCACCGGCCATGGCGCTCGCAAGAGGCCCAAGTGCCCATGA
Protein |
93 aa |
>Os03t0760800-01 A member of the GAST (gibberellin (GA)-Stimulated Transcript) family, Control of seedling growth and α-amylase expression, Cell proliferation in meristems and panicles development MKLNTTTTLALLLLLLLASSSLQVSMAGSDFCDGKCKVRCSKASRHDDCLKYCGVCCASC NCVPSGTAGNKDECPCYRDMTTGHGARKRPKCP*
5'UTR
chr03:31465558..31465623 (- strand) : 66 bp
CDS
chr03:31465470..31465557 (- strand) : 88 bp
chr03:31465171..31465364 (- strand) : 194 bp
3'UTR
chr03:31464821..31465170 (- strand) : 350 bp
FASTA
>Os03t0760800-01 class=Sequence position=chr03:31464821..31465623 (- strand) ACTCTCCACA ACACCCCAAC TCTGAAGCTG CTTGCTTGGA GTCTAGGACC AGCATTCACA AGCACAATGA AGCTCAACAC CACCACCACC CTGGCTCTCC TCCTGCTCCT GCTCTTGGCC TCCTCTTCCC TCCAAGTTTC CATGGCTGGA TCAGGTCAGT TTTCACAGGC ATTTTTTTTA GCAGAATAAT CTGCACAAGT ACACTGTTTT TCTTTCTTGG TGTTAACATG GTGAGCTGAA ACAATGAATG TTTTGGTAGA TTTCTGCGAC GGCAAGTGCA AGGTGAGGTG CTCGAAGGCG AGCAGGCACG ACGACTGCCT CAAGTACTGC GGCGTGTGCT GCGCCTCCTG CAACTGCGTG CCGTCGGGGA CGGCCGGCAA CAAGGACGAG TGCCCCTGCT ACCGCGACAT GACCACCGGC CATGGCGCTC GCAAGAGGCC CAAGTGCCCA TGATCATTTT TGCATTATGC ATGCTACATG ATGCTTAGCC ATCATCCGTA GTTGCTTTGC ATGCATGATG CATGCTCATG ATCGAGATGG AGTAGTAGAT ATATGCATAT GCTTGCCATG ATCGATCGTA TGGACCATGC AAAGTATGCT TGTTTGTGTG AGGATCGACT CGATCTTGAG TCTTTCCATG TTCTTGGTTT TCTTTTTTTA CTGCTAGTTA ATTACTATGG AGTACATGTG AATATGACAT CGGATATGTA ATGTATACAT GCATGCCTGG TGATAATAAT GGTGTGTGTG CTGTAATAAA GTGTTGGCTT AATTGGTGTA GTACATGTTC AGTTTAGTGT GCC
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