Locus
Os03g0770800
Description
CSLC9.
RAP-DB Gene Symbol Synonym(s)
RAP-DB Gene Name Synonym(s)
CGSNL Gene Symbol
CSLC9
CGSNL Gene Name
CELLULOSE SYNTHASE LIKE C9
Oryzabase Gene Symbol Synonym(s)
OsCslC9, OsCSLC9
Oryzabase Gene Name Synonym(s)
Transcript Evidence
AK121805 (DDBJ, Best hit)
Protein Evidence
C8CBX4 (UniProt)
Literature
Note
Manual Curation
Functional domain (InterPro)
Glycosyl transferase, family 2 (IPR001173)
Full-length cDNA
J033097L05 (Online Clone Ordering)
Expression Databases
TENOR (Os03t0770800-01)
RiceXPro (AK121805)
Others
Oryzabase (13896)
KEGG (Os03t0770800-01)
Transcript |
2259 bp |
>Os03t0770800-01 CSLC9. GCTTCTTCTTGAGCTTAAATGGCAGTGGGATCAGCTGCGTAGGTGTGAGGGGGAGGGATT GGCATTGAGGGGTGGGGGGAGGTGGAGGTCCAGGAATAGGGTGTGGGTGAAGTGTGGGAG GCTAATTTGGGGGTGAGAGAGGAGAAGGAGAGGTGAGGGGTGgggggaggaggaggggga ggctggttcttggaccggccattggatggcgccgtggagcggcttatggggcgggaagtt ggccgccgccggcgagagccccgtgctccgctcccgcttctacgcgttcatcagggcatt cgtcgtcctctcggtgctcctcctcatcgttgagctcggcgcctacatcaatggctggga cgacctcgccgcctccgcgctcgccctccccgtcatcggcgtcgagtcgctctacgcgtc gtggctgcgcttccgcgccacctatgtcgcgccattcatccagttcctcaccgacgcatg cgtcgtgctcttcctcatccagagcgccgaccgcctcatccagtgcctcggctgcttcta catccatctcaagcgcatcaagcctaaccccaagtcaccggcattgcccgacgccgaaga ccccgacgccgcgtactaccccatggtactcgtgcagataccaatgtgcaacgagaagga ggtttatcagcaatcaattgcggccgtgtgcaatcttgattggccgaggtccaacttctt ggttcaggtattggatgattcggacgatccgacgacgcagacactgatcagagaagaggt gctcaagtggcagcagaacggcgctcggattgtgtaccggcatcgtgtccttagggatgg ttataaggctggaaatctcaagtcggcgatgagctgcagctatgtcaaggactatgagtt tgttgccatctttgatgcggacttccaaccgaatccggacttcttgaagcgaaccgtgcc acatttcaaggacaatgatgaattggggctagtgcaagcaagatggtcatttgtgaataa ggatgagaacctattgactcgtctgcaaaacattaatctttgcttccactttgaggtaga acagcaagtgaatgggatattcctaaacttcttcgggttcaatggcactgctggtgtgtg gagaatcaaggcattggatgactcgggagggtggatggagcgtacaacagtggaggacat ggacattgcagtccgggcacaccttaggggctggaaatttatcttcctgaatgacgtcga gtgccaatgtgaattgccagagtcatacgaagcttataggaagcagcagcatcggtggca ttctggtccaatgcagctattcagactctgcttaccagacattatcaaatgcaagattgt gttttggaagaaagccaacttgatcttccttttcttccttctccggaagctcatactacc attctactctttcacgctcttctgcatcatcctcccaatgacgatgtttgtgcctgaagc cgagcttcctgactgggtcgtatgctacattcctgccctgatgtccttgctcaacatcct gccttctccgaagtctttccctttcatcatcccatacctacttttcgagaacaccatgtc cgtgacaaaattcaatgccatgatctctggtctgttccagcttggaaatgcatacgagtg ggtggtgaccaagaagtcaggccgatcatcggagggcgacctcatttctttggcacccaa agagttgaaacaccaaaaaactgaatcggcgcctaacctcgacgctattgcaaaggagca gtccgctcctagaaaggacgtaaagaagaagcacaaccggatatacaagaaagagcttgc actctcattgctcctcctaaccgctgcagctcgcagtttgctctcgaaacagggtataca tttctacttcctcctgttccagggcatatctttcttgttagtaggccttgatctcatagg cgagcaGATTGAGTAAACTGTGAAAAGCATGATAGATGTTAAAAAAACAGTGACAATGGA GGGTGCTCCAGGGATGTTGTGTCGAAGCTCTTTGGCGATATTGAAATGTTGCATGACGCA ATTGTGTCGTCCAATTGATTTATGTCACGACTTCACACAACATGATCCACAATGTACACG CCCAAATAGGCCCCTCCCCCCTCGGTTGTGTAGATATAGTTGTTCTTGGACTGTAAATTT GCCTAGTTATTCCAAGACTATCCGATTCTTTTGTAAACC
CDS |
1791 bp |
>Os03t0770800-01 CSLC9. atggcgccgtggagcggcttatggggcgggaagttggccgccgccggcgagagccccgtg ctccgctcccgcttctacgcgttcatcagggcattcgtcgtcctctcggtgctcctcctc atcgttgagctcggcgcctacatcaatggctgggacgacctcgccgcctccgcgctcgcc ctccccgtcatcggcgtcgagtcgctctacgcgtcgtggctgcgcttccgcgccacctat gtcgcgccattcatccagttcctcaccgacgcatgcgtcgtgctcttcctcatccagagc gccgaccgcctcatccagtgcctcggctgcttctacatccatctcaagcgcatcaagcct aaccccaagtcaccggcattgcccgacgccgaagaccccgacgccgcgtactaccccatg gtactcgtgcagataccaatgtgcaacgagaaggaggtttatcagcaatcaattgcggcc gtgtgcaatcttgattggccgaggtccaacttcttggttcaggtattggatgattcggac gatccgacgacgcagacactgatcagagaagaggtgctcaagtggcagcagaacggcgct cggattgtgtaccggcatcgtgtccttagggatggttataaggctggaaatctcaagtcg gcgatgagctgcagctatgtcaaggactatgagtttgttgccatctttgatgcggacttc caaccgaatccggacttcttgaagcgaaccgtgccacatttcaaggacaatgatgaattg gggctagtgcaagcaagatggtcatttgtgaataaggatgagaacctattgactcgtctg caaaacattaatctttgcttccactttgaggtagaacagcaagtgaatgggatattccta aacttcttcgggttcaatggcactgctggtgtgtggagaatcaaggcattggatgactcg ggagggtggatggagcgtacaacagtggaggacatggacattgcagtccgggcacacctt aggggctggaaatttatcttcctgaatgacgtcgagtgccaatgtgaattgccagagtca tacgaagcttataggaagcagcagcatcggtggcattctggtccaatgcagctattcaga ctctgcttaccagacattatcaaatgcaagattgtgttttggaagaaagccaacttgatc ttccttttcttccttctccggaagctcatactaccattctactctttcacgctcttctgc atcatcctcccaatgacgatgtttgtgcctgaagccgagcttcctgactgggtcgtatgc tacattcctgccctgatgtccttgctcaacatcctgccttctccgaagtctttccctttc atcatcccatacctacttttcgagaacaccatgtccgtgacaaaattcaatgccatgatc tctggtctgttccagcttggaaatgcatacgagtgggtggtgaccaagaagtcaggccga tcatcggagggcgacctcatttctttggcacccaaagagttgaaacaccaaaaaactgaa tcggcgcctaacctcgacgctattgcaaaggagcagtccgctcctagaaaggacgtaaag aagaagcacaaccggatatacaagaaagagcttgcactctcattgctcctcctaaccgct gcagctcgcagtttgctctcgaaacagggtatacatttctacttcctcctgttccagggc atatctttcttgttagtaggccttgatctcataggcgagcaGATTGAGTAA
Protein |
596 aa |
>Os03t0770800-01 CSLC9. MAPWSGLWGGKLAAAGESPVLRSRFYAFIRAFVVLSVLLLIVELGAYINGWDDLAASALA LPVIGVESLYASWLRFRATYVAPFIQFLTDACVVLFLIQSADRLIQCLGCFYIHLKRIKP NPKSPALPDAEDPDAAYYPMVLVQIPMCNEKEVYQQSIAAVCNLDWPRSNFLVQVLDDSD DPTTQTLIREEVLKWQQNGARIVYRHRVLRDGYKAGNLKSAMSCSYVKDYEFVAIFDADF QPNPDFLKRTVPHFKDNDELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGIFL NFFGFNGTAGVWRIKALDDSGGWMERTTVEDMDIAVRAHLRGWKFIFLNDVECQCELPES YEAYRKQQHRWHSGPMQLFRLCLPDIIKCKIVFWKKANLIFLFFLLRKLILPFYSFTLFC IILPMTMFVPEAELPDWVVCYIPALMSLLNILPSPKSFPFIIPYLLFENTMSVTKFNAMI SGLFQLGNAYEWVVTKKSGRSSEGDLISLAPKELKHQKTESAPNLDAIAKEQSAPRKDVK KKHNRIYKKELALSLLLLTAAARSLLSKQGIHFYFLLFQGISFLLVGLDLIGEQIE*
5'UTR
chr03:31934273..31934477 (- strand) : 205 bp
CDS
chr03:31934230..31934272 (- strand) : 43 bp
chr03:31933505..31933917 (- strand) : 413 bp
chr03:31933105..31933413 (- strand) : 309 bp
chr03:31932723..31933013 (- strand) : 291 bp
chr03:31932517..31932630 (- strand) : 114 bp
chr03:31931098..31931718 (- strand) : 621 bp
3'UTR
chr03:31930835..31931097 (- strand) : 263 bp
FASTA
>Os03t0770800-01 class=Sequence position=chr03:31930835..31934477 (- strand) GCTTCTTCTT GAGCTTAAAT GGCAGTGGGA TCAGCTGCGT AGGTGTGAGG GGGAGGGATT GGCATTGAGG GGTGGGGGGA GGTGGAGGTC CAGGAATAGG GTGTGGGTGA AGTGTGGGAG GCTAATTTGG GGGTGAGAGA GGAGAAGGAG AGGTGAGGGG TGgggggagg aggaggggga ggctggttct tggaccggcc attggatggc gccgtggagc ggcttatggg gcgggaagtt ggccgccggc ggcggcggcg gcggcggcga ccactaccgg ggcacgccgg tggtggtcaa gatggagaac cccaactggt ccatctccga gatctcctcg ccggatgacg acgacgacga ggagttcttg gtcggcggcc gccgcaaggg ggggcgcggc aagaacgcca agcagatcac ctgggtgctg ctgctcaagg cgcaccgcgc cgccgggtgc ctcgcgtcgc tggcctccgc ggccgtcgcg ctcggcgccg ccgccaggcg gagggtcgcc gccgggagga cggacgccga cgcctccgcc gccgccgccg ccggcgagag ccccgtgctc cgctcccgct tctacgcgtt catcagggca ttcgtcgtcc tctcggtgct cctcctcatc gttgagctcg gcgcctacat caatggctgg gacgacctcg ccgcctccgc gctcgccctc cccgtcatcg gcgtcgagtc gctctacgcg tcgtggctgc gcttccgcgc cacctatgtc gcgccattca tccagttcct caccgacgca tgcgtcgtgc tcttcctcat ccagagcgcc gaccgcctca tccagtgcct cggctgcttc tacatccatc tcaagcgcat caagcctaac cccaagtcac cggcattgcc cgacgccgaa gaccccgacg ccgcgtacta ccccatggta ctcgtgcaga taccaatgtg caacgagaag gaggtTGGTT TGTGCTGTTG CTATCGCTCT AAAACATGCC ATTTTTTGTC TCCGAAGTAG CAACCTTTTG ATGTTTGTTT GTTGGTCTGT Ccaggtttat cagcaatcaa ttgcggccgt gtgcaatctt gattggccga ggtccaactt cttggttcag gtattggatg attcggacga tccgacgacg cagacactga tcagagaaga ggtgctcaag tggcagcaga acggcgctcg gattgtgtac cggcatcgtg tccttaggga tggttataag gctggaaatc tcaagtcggc gatgagctgc agctatgtca aggactatga gtttgttgcc atctttgatg cggacttcca accgaatccg gacttcttga agcgaaccgt gccacatttc aaggtaaatt gagatgaatt ttgtgcctat agtttgtggt gataatgtat atggtttagg gttctaatta tgattcattt gtttgctgtt gcaggacaat gatgaattgg ggctagtgca agcaagatgg tcatttgtga ataaggatga gaacctattg actcgtctgc aaaacattaa tctttgcttc cactttgagg tagaacagca agtgaatggg atattcctaa acttcttcgg gttcaatggc actgctggtg tgtggagaat caaggcattg gatgactcgg gagggtggat ggagcgtaca acagtggagg acatggacat tgcagtccgg gcacacctta ggggctggaa atttatcttc ctgaatgacg tcgaggtact atatatgaca aactttctga ataacttgtt gggttatgtt tcttcacctt ttcagttgaa ataacccatt tccctcatta tggacagtgc caatgtgaat tgccagagtc atacgaagct tataggaagc agcagcatcg gtggcattct ggtccaatgc agctattcag actctgctta ccagacatta tcaaatgcaa ggtactgatt tgctcttatt tgttgtagTA CTTTATTTTT GTAAACATCT AAACAATGAA CTTATATAAC CAAATGTTGT TATGAGATAT CCGATTGGTC TGGATAAATA TATCTGTTAA TGCAAACACG AAATAAAATT AAGGCTTTAC AGCATTTTTT CCCGTATCCA TTCTGTGCAA CTTTGTCTTC AAATAGCATG TCAGATATAT CATTTAATCC GTTTATTACT TAAAGTGAAA ATTTGAACAT CAACAGGTAA ATAATGTGAT CTTGACAAAA AAAAGTGTGT TCGGTGCTTT TGTTGGATAC ACAACACGCG CTCATGGCAT CGCGAATATG CTCCAAGGAT GTTAACATGA TGAAATTCTA AAATGTTAGA GGTTTTTTTA TACTCTTTAA CTGATTCTCG AAATATTAAT TCACATATTG ATATGTCCTG TACCATTAGC CTTTTCTCTC AAGTACTTAG GTTTATACAC TTCAATAAAG ACGCATGCTC ATCGAGCAGC ATCCATCTCA CTAGAATATA AAATGTTGAT ATCTAATTGT ATATCATTTG TGCGCATGTT ACAACTGGAC CTTTTTTTGC ATTACCATGA TAGAATATGA ATTTGCTTAT CACCTTTTGT TGTCATTGTC ATCAAAATAA TGTACTACCT GATAGGATGT CTGGATGAAA CAACTGACTT GTTGATAGCT CTGTTTTACC AATCTGATTG CTAGATGAAA CAACTGGCTT GTTGATAGCT CTGTTTTACC AATCTgattg cttattaatt ttgttttatt ctgctgcaga ttgtgttttg gaagaaagcc aacttgatct tccttttctt ccttctccgg aagctcatac taccattcta ctctttcacg ctcttctgca tcatcctccc aatgacgatg tttgtgcctg aagccgagct tcctgactgg gtcgtatgct acattcctgc cctgatgtcc ttgctcaaca tcctgccttc tccgaagtct ttccctttca tcatcccata cctacttttc gagaacacca tgtccgtgac aaaattcaat gccatgatct ctggtctgtt ccagcttgga aatgcatacg agtgggtggt gaccaagaag tcaggccgat catcggaggg cgacctcatt tctttggcac ccaaagagtt gaaacaccaa aaaactgaat cggcgcctaa cctcgacgct attgcaaagg agcagtccgc tcctagaaag gacgtaaaga agaagcacaa ccggatatac aagaaagagc ttgcactctc attgctcctc ctaaccgctg cagctcgcag tttgctctcg aaacagggta tacatttcta cttcctcctg ttccagggca tatctttctt gttagtaggc cttgatctca taggcgagca GATTGAGTAA ACTGTGAAAA GCATGATAGA TGTTAAAAAA ACAGTGACAA TGGAGGGTGC TCCAGGGATG TTGTGTCGAA GCTCTTTGGC GATATTGAAA TGTTGCATGA CGCAATTGTG TCGTCCAATT GATTTATGTC ACGACTTCAC ACAACATGAT CCACAATGTA CACGCCCAAA TAGGCCCCTC CCCCCTCGGT TGTGTAGATA TAGTTGTTCT TGGACTGTAA ATTTGCCTAG TTATTCCAAG ACTATCCGAT TCTTTTGTAA ACC
Locus: Os03g0770800
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Locus: Os03g0770800
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