Os06t0493100-01

Locus

Os06g0493100

Description

Conserved hypothetical protein.

RAP-DB Gene Symbol Synonym(s)

RAP-DB Gene Name Synonym(s)

CGSNL Gene Symbol

CGSNL Gene Name

Oryzabase Gene Symbol Synonym(s)

bphi008a, BpHi008A, OsRALF-22, OsRALF22, RALF-22, RALF22

Oryzabase Gene Name Synonym(s)

brown planthopper induced008a, Brown planthopper induced 008a, Rapid alkalization factor 22

Transcript Evidence

AK063797 (DDBJ, Best hit)

Protein Evidence

Q84QS8 (UniProt)

Literature

Note

Manual Curation

Full-length cDNA

001-121-F04 (Online Clone Ordering)

Expression Databases

TENOR (Os06t0493100-01)

RiceXPro (AK063797)

Others

Oryzabase (9260)

KEGG (Os06t0493100-01)

Transcript

529 bp

>Os06t0493100-01 Conserved hypothetical protein.
ATATATCAAGCATACACAAGAAGGATTTATTGAAGGCCAACCATGGCGTCTCTTAGAGCC
ACCACACTCCTTGTGTTGATGCAAATTATTATGGTGTTTTACACCGTCATCTTAAGCTGC
TCGTTTTCTGATGCCCGAACTTTCCCAGGCGGAGAAGGTGGGTTAGACCCAAATCATCCA
GTATGCGTTGGCGGCGCGTGTCCAACACCAGGTCTACCATACACTAATCCACGTGATCCT
TGCATATACCGTAACAGGTGCAATCCACCAGGACGGATGGGTGATCCATAAGTAATTTTC
ATCATCAATATTTATCGTTGTGATCCAGTATACGTCCACATCGTCCACATGACAATAGTG
TGTGTTTGTGTATGTTATACTAGTATTCACTAGCTGCTCACACTGCATGAGAGCTAGTTA
ATTAAGAGAATGTCTATGTATGACAAATAATGTACTGTGGTACTATATATGTATCCCCCT
GTCTCGGCAATATATGGATTAATAAGACATGTGTACTCTGGATCTGATT

CDS

249 bp

>Os06t0493100-01 Conserved hypothetical protein.
ATGGCGTCTCTTAGAGCCACCACACTCCTTGTGTTGATGCAAATTATTATGGTGTTTTAC
ACCGTCATCTTAAGCTGCTCGTTTTCTGATGCCCGAACTTTCCCAGGCGGAGAAGGTGGG
TTAGACCCAAATCATCCAGTATGCGTTGGCGGCGCGTGTCCAACACCAGGTCTACCATAC
ACTAATCCACGTGATCCTTGCATATACCGTAACAGGTGCAATCCACCAGGACGGATGGGT
GATCCATAA

Protein

83 aa

>Os06t0493100-01 Conserved hypothetical protein.
MASLRATTLLVLMQIIMVFYTVILSCSFSDARTFPGGEGGLDPNHPVCVGGACPTPGLPY
TNPRDPCIYRNRCNPPGRMGDP*

5'UTR

chr06:17068571..17068612 (- strand) : 42 bp

CDS

chr06:17068465..17068570 (- strand) : 106 bp

chr06:17067166..17067308 (- strand) : 143 bp

3'UTR

chr06:17066928..17067165 (- strand) : 238 bp

FASTA

>Os06t0493100-01 class=Sequence position=chr06:17066928..17068612 (- strand)
ATATATCAAG CATACACAAG AAGGATTTAT TGAAGGCCAA CCATGGCGTC TCTTAGAGCC ACCACACTCC TTGTGTTGAT
GCAAATTATT ATGGTGTTTT ACACCGTCAT CTTAAGCTGC TCGTTTTCTG ATGCCCGAAC TTTCCCAGGT GAGTGTGTCA
ATTTTTAGCC TTTTTTTCCT TGAGCAATAT ATATTAGTTC CACCGTTCTA TACTCACCCC ACCACGGCAT AAAACTTACA
AGGTTGGGTT AAAATAGAAG GGCGTGGAAT TTCTACATTT TTAACAAAAG AATATATATA TATATATATA TATATATATA
TATATATATA TATATATATA TATATATATG TAGGTTAGAT ATAATTGTGA GATAACCATC AACTGTTATG GGCATATATA
TATCCATAAA TTGTTATGTT GACATATTTG CACTTCAGTA GTAACACCTC AGCTACTGTG TTTACGTACA GTGAAATTCT
AGTTCTTGAA CTTTCTAATG CAAAATAATT TAACTACTTT AAAATAAAGT AAACCTTCCG TAAGTATTAG CAAGGCCAGA
CTATCTCTAT TGGCAAGGCT AAGGGTGCCT TTTTTTTTAA TTATGATTTT GGTTGTTTAG CTATACGTAG AACGTGAAAC
ATGATTATTA TATGATTAGT TGAGTATTAA TTATTAAAAC TTACAAAATA TATTTATTTA ATTTTTAAAA CATTTTCTAT
ATATAGAGTT TTTCACACAA CGAGACAAGG ATTTAACTAT GCTGTCCATA GTGTTGTGGC AAGCCACCAT CGTCAATGTC
GTCGTGCCAT GAGCAGAGTA GTACTGTATA GTAACTTGCC ACACCACCGA AATATTTATA TTTAAAAATA TGTTTTTATG
TGGTACTCCC TCTATTTCAG GTTATAAGAT Atttaagttt tttttaccaa atttatagaa aaaaatagta atattttcga
cccaagataa atttattata aaaataaatt taattactaa tttaataaaa ctaatttagt aatgtaaata ttacaatatt
tatctataaa tttaattaaa cttaaagcag tttaactttA GCTAAAGTCA AAACATCTTA TAATCTGAAA TGGATGGAAT
ATATTTTAAA AACTACACGA AAAAGGTTAA GAAAAATTTA CATCACCTTG GGTCCATATA TAGATATCTC GCATGCTAAC
TGTTTGGAAA AAAAAACCCT GAAATATATA TAGGCCTGGT AAATATAATG GCAAATAACG TGTTGCTAGT TCGTCTAATA
TAATGGCAAA TAACCAATGT ACAGGCGGAG AAGGTGGGTT AGACCCAAAT CATCCAGTAT GCGTTGGCGG CGCGTGTCCA
ACACCAGGTC TACCATACAC TAATCCACGT GATCCTTGCA TATACCGTAA CAGGTGCAAT CCACCAGGAC GGATGGGTGA
TCCATAAGTA ATTTTCATCA TCAATATTTA TCGTTGTGAT CCAGTATACG TCCACATCGT CCACATGACA ATAGTGTGTG
TTTGTGTATG TTATACTAGT ATTCACTAGC TGCTCACACT GCATGAGAGC TAGTTAATTA AGAGAATGTC TATGTATGAC
AAATAATGTA CTGTGGTACT ATATATGTAT CCCCCTGTCT CGGCAATATA TGGATTAATA AGACATGTGT ACTCTGGATC
TGATT

Locus: Os06g0493100

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Locus: Os06g0493100

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