Locus
Os06g0539500
Description
Similar to Non-specific lipid-transfer protein.
RAP-DB Gene Symbol Synonym(s)
RAP-DB Gene Name Synonym(s)
CGSNL Gene Symbol
CGSNL Gene Name
Oryzabase Gene Symbol Synonym(s)
OsLTP1.6, OsLtpI.6
Oryzabase Gene Name Synonym(s)
non-specific lipid transfer protein 1.6, lipid transfer protein 1.6, type 1 non-specific lipid transfer protein 6
Transcript Evidence
BT066221 (DDBJ)
Protein Evidence
B9FTM6 (UniProt)
Literature
Note
- Exon-intron structures and exon sequences are different between Build 5 and IRGSP-1.0.
Manual Curation
Gene Ontology (GO)
Biological Process: lipid transport (GO:0006869)
Molecular Function: lipid binding (GO:0008289)
Functional domain (InterPro)
Plant lipid transfer protein/Par allergen (IPR000528)
Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (IPR003612)
Plant lipid transfer protein/hydrophobic protein, helical domain (IPR013770)
Bifunctional inhibitor/plant lipid transfer protein/seed storage (IPR016140)
Expression Databases
TENOR (Os06t0539500-00)
Others
Oryzabase (13515)
Transcript |
377 bp |
>Os06t0539500-00 Similar to Non-specific lipid-transfer protein. ATGGGCAAGAACGCGAGCCGCCTCGCCGTCGCCGCCGTCGTCGTGTTCGCGCTGCTGCTG TCGCTCCGGCAGCTGGAGGCGGCCGACGACGTCTCCGTGTCGTGCTCCGACGTGGTCGCC GACGTGACGCCGTGCCTGGGGTTCCTGCAGGGAGACGACGACCACCCCTCCGGCGAGTGC TGCGACGGCCTGTCCGGCCTGGTGGCCGCCGCGGCCACCACGGAGGACCGGCAGGCGGCG TGCGAGTGCCTCAAGTCGGCCGTCTCCGGCCAGTTCACCGCCGTCGAGGCCGCGCCGGCG AGGGACCTGCCGGCGGACTGCGGCCTCTCCCTGCCCTACACCTTCTCGCCGGACGTCGAC TGCTCCCAGTAAGTACA
CDS |
372 bp |
>Os06t0539500-00 Similar to Non-specific lipid-transfer protein. ATGGGCAAGAACGCGAGCCGCCTCGCCGTCGCCGCCGTCGTCGTGTTCGCGCTGCTGCTG TCGCTCCGGCAGCTGGAGGCGGCCGACGACGTCTCCGTGTCGTGCTCCGACGTGGTCGCC GACGTGACGCCGTGCCTGGGGTTCCTGCAGGGAGACGACGACCACCCCTCCGGCGAGTGC TGCGACGGCCTGTCCGGCCTGGTGGCCGCCGCGGCCACCACGGAGGACCGGCAGGCGGCG TGCGAGTGCCTCAAGTCGGCCGTCTCCGGCCAGTTCACCGCCGTCGAGGCCGCGCCGGCG AGGGACCTGCCGGCGGACTGCGGCCTCTCCCTGCCCTACACCTTCTCGCCGGACGTCGAC TGCTCCCAGTAA
Protein |
123 aa |
>Os06t0539500-00 Similar to Non-specific lipid-transfer protein. MGKNASRLAVAAVVVFALLLSLRQLEAADDVSVSCSDVVADVTPCLGFLQGDDDHPSGEC CDGLSGLVAAAATTEDRQAACECLKSAVSGQFTAVEAAPARDLPADCGLSLPYTFSPDVD CSQ*
CDS
chr06:20257255..20257626 (- strand) : 372 bp
3'UTR
chr06:20257250..20257254 (- strand) : 5 bp
FASTA
>Os06t0539500-00 class=Sequence position=chr06:20257250..20257626 (- strand) ATGGGCAAGA ACGCGAGCCG CCTCGCCGTC GCCGCCGTCG TCGTGTTCGC GCTGCTGCTG TCGCTCCGGC AGCTGGAGGC GGCCGACGAC GTCTCCGTGT CGTGCTCCGA CGTGGTCGCC GACGTGACGC CGTGCCTGGG GTTCCTGCAG GGAGACGACG ACCACCCCTC CGGCGAGTGC TGCGACGGCC TGTCCGGCCT GGTGGCCGCC GCGGCCACCA CGGAGGACCG GCAGGCGGCG TGCGAGTGCC TCAAGTCGGC CGTCTCCGGC CAGTTCACCG CCGTCGAGGC CGCGCCGGCG AGGGACCTGC CGGCGGACTG CGGCCTCTCC CTGCCCTACA CCTTCTCGCC GGACGTCGAC TGCTCCCAGT AAGTACA
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