Locus
Os06g0715300
Description
Similar to CEL5=CELLULASE 5 (Fragment).
RAP-DB Gene Symbol Synonym(s)
RAP-DB Gene Name Synonym(s)
CGSNL Gene Symbol
GH9B6
CGSNL Gene Name
GLYCOSIDE HYDROLASE 9B6
Oryzabase Gene Symbol Synonym(s)
OsGH9B6
Oryzabase Gene Name Synonym(s)
glycoside hydrolase OsGH9B6, glycoside hydrolase 9B6
Transcript Evidence
AK121369 (DDBJ, Best hit)
Protein Evidence
E7CQZ8 (UniProt)
Literature
Note
Manual Curation
Gene Ontology (GO)
Biological Process: carbohydrate metabolic process (GO:0005975)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553)
Functional domain (InterPro)
Glycoside hydrolase, family 9 (IPR001701)
Six-hairpin glycosidase-like (IPR008928)
Six-hairpin glycosidase (IPR012341)
Glycoside hydrolase, family 9, active site (IPR018221)
Full-length cDNA
J023125K15 (Online Clone Ordering)
Expression Databases
TENOR (Os06t0715300-01)
RiceXPro (AK121369)
Others
Oryzabase (11706)
KEGG (Os06t0715300-01)
Transcript |
2066 bp |
>Os06t0715300-01 Similar to CEL5=CELLULASE 5 (Fragment). GGTCGAGACGGTCATGGCGAGCCTCTAACTCCCCACCAACTGCCGCCTCTCGTCGCCTCG CCTCGCCGGCGCCACCTCCGCATTCCGTTCCGACCAGCCGATCGGTTTCTTCCTCGCCGT TGCAACCTTCGAGCGCGATCGATCGAGGCGGTTGACCGCCGATTCGCCGCGCGGCGTTGC ATTGCACGCGGCTTTCCAGTTGATAAATCAATCATCATCCCCTTGATCGATGCGAGTGGC GTTCTTGTTCGATCGAGAGGAGGAGATCGTGATCGCGAGCGATCCGGGCGGGGCGGCGCG CCATCGATGGCGAACTGCGTGCGGTGCTGCTGCTGGCTCCTGGTGCTGATGCTCATGGCG CTCGCGATCACCGCCGCCGTGGTGTTCGTCCGCTACAAGAACGGCGAGGGGGTCTTCCcc ttccccggcgtgcccggcgccgtcgaccacaagtacgccgacgcgctcgccgtcgccctc cagttcttccaggtccaGAAATCCGGGAAGCTGGTGAACAACACGATCCACTGGAGAGGT GACTCGGCGCTGGACGACGGCAAGGAGGCCGGGATTGATCTCTCCAAGGGGATGTACGAC GCCGGCGACCACATGAAGTTCGGATTCCCCATGGCGTTCACGGCCACCATGCTCTCTTGG TCCGTCCTCGAGTACGGCGACGCCATGCGCGCCGCCGACCAGCGCGACTCCGCCATTGAC GCGCTGAATTGGATCATGGATTACCTCGTCAATGCCCACCCCTCCGACGACGTCCTCTAC ATCCAGGTGGGTGATCCTAAAGCAGACCACAAGTGCTGGGAGCGGCCGGAGAAGATGAAG GAGAAGAGGCCACTGACCAAGATCACGCCCAAGTCCCCCGGCAGCGACGTGGCGGCGGAG ACGGCGGCGGCCATGGCGGCGGCGTCGCTGGTGTACAAGACGATCAACAAGACGTACTCG TCGTCGCTCCTGGACCACGGCGAGAGGCTGTTCGCCTTCGCCGACAAGCACCGGGGATCC TACACCCGGACGTTCCCGGAGCTCAGCGCGTTCTACAACTCCACCACGTACCAGGACGAG CTCCTCTGGGCGGCGAGCTGGCTCTACCACGCCACCGGCAACCACAGCTACCTCGCCTAC GCCACCGGCAAGAACAAGGACTTCGCCGACCTGGGCAACCCGAGATACTTCAGCTGGGAC GACAAGCGCGCCGGAACCGAGGTTCTTTTGTCGAGGGTGAGCTTCTTTGCTTCGCAAGGA TCAGACGTTGCACAAGACGATGTTCTTGGGATGTACAAGCAGACTGCTGATGCCGTCATG TGCATTCTCCTGCCGGATTCAGAGACCGCCGCTTTCAGAACAGAAGGTGGTTTGCTGTAC GTTGCCGAGTGGAACTCACTCCAGCACCCGGTGGCATCGGCGTTCCTCGCCGCGGTTTAC AGCGACTACATGCAGAGCTCCGGGAAGACGGAGCTGAGCTGCAGCGGGCAGGGCTTCTCG CCGGCCGACCTGCGCAAATTCGCCAAGTCCCAGGCGGATTACTTGCTAGGCAGCAACCCG ATGAAGATTAGTTACCTAGTCGGGTACGGCGACCGGTACCCGGAGAAGGTGCACCACCGC GGCGCGTCCATCCCGGAGGACGTCGACACCGGCTGCGACGGCCACAAGTGGCTGGAGACG TCCAAGCCCAACCCAAACGTCGCCACCGGCGCGCTCGTCGGCGGTCCGTACAAGAACGAC AGCTTCGTCGACGAGCGCGACAACGTGATGCAGAACGAGGCCACCACCTACAACAGCGCC CTCGTCGCCGGCTTGCTCTCCGCCCTCGTCTCCACCTCCTCCCTCGCGCGATCCTTGTCA TGATCTGCATTGCTCGGATTCTGACGGTTTACCACTCATTAGATGGCATGCAAATGCTGG CTCAAACTGATGAAGAAATGGTAGGGAGGATGTTGTATCATGGATCGAAGAAGTCGGTGA TCTGTATGTGAAAAGGGTAATTAGTACTGTACTAGTACTTATACTTACTAACAAAAATAA TCATTAGAAACTACTTTTGTTTGTTC
CDS |
1557 bp |
>Os06t0715300-01 Similar to CEL5=CELLULASE 5 (Fragment). ATGGCGAACTGCGTGCGGTGCTGCTGCTGGCTCCTGGTGCTGATGCTCATGGCGCTCGCG ATCACCGCCGCCGTGGTGTTCGTCCGCTACAAGAACGGCGAGGGGGTCTTCCccttcccc ggcgtgcccggcgccgtcgaccacaagtacgccgacgcgctcgccgtcgccctccagttc ttccaggtccaGAAATCCGGGAAGCTGGTGAACAACACGATCCACTGGAGAGGTGACTCG GCGCTGGACGACGGCAAGGAGGCCGGGATTGATCTCTCCAAGGGGATGTACGACGCCGGC GACCACATGAAGTTCGGATTCCCCATGGCGTTCACGGCCACCATGCTCTCTTGGTCCGTC CTCGAGTACGGCGACGCCATGCGCGCCGCCGACCAGCGCGACTCCGCCATTGACGCGCTG AATTGGATCATGGATTACCTCGTCAATGCCCACCCCTCCGACGACGTCCTCTACATCCAG GTGGGTGATCCTAAAGCAGACCACAAGTGCTGGGAGCGGCCGGAGAAGATGAAGGAGAAG AGGCCACTGACCAAGATCACGCCCAAGTCCCCCGGCAGCGACGTGGCGGCGGAGACGGCG GCGGCCATGGCGGCGGCGTCGCTGGTGTACAAGACGATCAACAAGACGTACTCGTCGTCG CTCCTGGACCACGGCGAGAGGCTGTTCGCCTTCGCCGACAAGCACCGGGGATCCTACACC CGGACGTTCCCGGAGCTCAGCGCGTTCTACAACTCCACCACGTACCAGGACGAGCTCCTC TGGGCGGCGAGCTGGCTCTACCACGCCACCGGCAACCACAGCTACCTCGCCTACGCCACC GGCAAGAACAAGGACTTCGCCGACCTGGGCAACCCGAGATACTTCAGCTGGGACGACAAG CGCGCCGGAACCGAGGTTCTTTTGTCGAGGGTGAGCTTCTTTGCTTCGCAAGGATCAGAC GTTGCACAAGACGATGTTCTTGGGATGTACAAGCAGACTGCTGATGCCGTCATGTGCATT CTCCTGCCGGATTCAGAGACCGCCGCTTTCAGAACAGAAGGTGGTTTGCTGTACGTTGCC GAGTGGAACTCACTCCAGCACCCGGTGGCATCGGCGTTCCTCGCCGCGGTTTACAGCGAC TACATGCAGAGCTCCGGGAAGACGGAGCTGAGCTGCAGCGGGCAGGGCTTCTCGCCGGCC GACCTGCGCAAATTCGCCAAGTCCCAGGCGGATTACTTGCTAGGCAGCAACCCGATGAAG ATTAGTTACCTAGTCGGGTACGGCGACCGGTACCCGGAGAAGGTGCACCACCGCGGCGCG TCCATCCCGGAGGACGTCGACACCGGCTGCGACGGCCACAAGTGGCTGGAGACGTCCAAG CCCAACCCAAACGTCGCCACCGGCGCGCTCGTCGGCGGTCCGTACAAGAACGACAGCTTC GTCGACGAGCGCGACAACGTGATGCAGAACGAGGCCACCACCTACAACAGCGCCCTCGTC GCCGGCTTGCTCTCCGCCCTCGTCTCCACCTCCTCCCTCGCGCGATCCTTGTCATGA
Protein |
519 aa |
>Os06t0715300-01 Similar to CEL5=CELLULASE 5 (Fragment). MANCVRCCCWLLVLMLMALAITAAVVFVRYKNGEGVFPFPGVPGAVDHKYADALAVALQF FQVQKSGKLVNNTIHWRGDSALDDGKEAGIDLSKGMYDAGDHMKFGFPMAFTATMLSWSV LEYGDAMRAADQRDSAIDALNWIMDYLVNAHPSDDVLYIQVGDPKADHKCWERPEKMKEK RPLTKITPKSPGSDVAAETAAAMAAASLVYKTINKTYSSSLLDHGERLFAFADKHRGSYT RTFPELSAFYNSTTYQDELLWAASWLYHATGNHSYLAYATGKNKDFADLGNPRYFSWDDK RAGTEVLLSRVSFFASQGSDVAQDDVLGMYKQTADAVMCILLPDSETAAFRTEGGLLYVA EWNSLQHPVASAFLAAVYSDYMQSSGKTELSCSGQGFSPADLRKFAKSQADYLLGSNPMK ISYLVGYGDRYPEKVHHRGASIPEDVDTGCDGHKWLETSKPNPNVATGALVGGPYKNDSF VDERDNVMQNEATTYNSALVAGLLSALVSTSSLARSLS*
5'UTR
chr06:30366357..30366662 (- strand) : 306 bp
CDS
chr06:30366161..30366356 (- strand) : 196 bp
chr06:30365797..30366080 (- strand) : 284 bp
chr06:30365281..30365715 (- strand) : 435 bp
chr06:30365021..30365165 (- strand) : 145 bp
chr06:30364733..30364899 (- strand) : 167 bp
chr06:30364257..30364586 (- strand) : 330 bp
3'UTR
chr06:30364054..30364256 (- strand) : 203 bp
FASTA
>Os06t0715300-01 class=Sequence position=chr06:30364054..30366662 (- strand) GGTCGAGACG GTCATGGCGA GCCTCTAACT CCCCACCAAC TGCCGCCTCT CGTCGCCTCG CCTCGCCGGC GCCACCTCCG CATTCCGTTC CGACCAGCCG ATCGGTTTCT TCCTCGCCGT TGCAACCTTC GAGCGCGATC GATCGAGGCG GTTGACCGCC GATTCGCCGC GCGGCGTTGC ATTGCACGCG GCTTTCCAGT TGATAAATCA ATCATCATCC CCTTGATCGA TGCGAGTGGC GTTCTTGTTC GATCGAGAGG AGGAGATCGT GATCGCGAGC GATCCGGGCG GGGCGGCGCG CCATCGATGG CGAACTGCGT GCGGTGCTGC TGCTGGCTCC TGGTGCTGAT GCTCATGGCG CTCGCGATCA CCGCCGCCGT GGTGTTCGTC CGCTACAAGA ACGGCGAGGG GGTCTTCCcc ttccccggcg tgcccggcgc cgtcgaccac aagtacgccg acgcgctcgc cgtcgccctc cagttcttcc aggtccaGAA ATGTAAGGAA TTATTCTCAA CTTTGCATGC ATTTTTTTTT TTTGCGTTTG ATCTCGATCA TGGAAGTTCT TGATCGATGA AGCCGGGAAG CTGGTGAACA ACACGATCCA CTGGAGAGGT GACTCGGCGC TGGACGACGG CAAGGAGGCC GGGATTGATC TCTCCAAGGG GATGTACGAC GCCGGCGACC ACATGAAGTT CGGATTCCCC ATGGCGTTCA CGGCCACCAT GCTCTCTTGG TCCGTCCTCG AGTACGGCGA CGCCATGCGC GCCGCCGACC AGCGCGACTC CGCCATTGAC GCGCTGAATT GGATCATGGA TTACCTCGTC AATGCCCACC CCTCCGACGA CGTCCTCTAC ATCCAGGTGA TCATCATCAA ATGATCGAAT AATCTTTATC CAATTCTTGG GAAATCAATT AATTTCTTCT GGCATTCTGA TCTCCAGGTG GGTGATCCTA AAGCAGACCA CAAGTGCTGG GAGCGGCCGG AGAAGATGAA GGAGAAGAGG CCACTGACCA AGATCACGCC CAAGTCCCCC GGCAGCGACG TGGCGGCGGA GACGGCGGCG GCCATGGCGG CGGCGTCGCT GGTGTACAAG ACGATCAACA AGACGTACTC GTCGTCGCTC CTGGACCACG GCGAGAGGCT GTTCGCCTTC GCCGACAAGC ACCGGGGATC CTACACCCGG ACGTTCCCGG AGCTCAGCGC GTTCTACAAC TCCACCACGT ACCAGGACGA GCTCCTCTGG GCGGCGAGCT GGCTCTACCA CGCCACCGGC AACCACAGCT ACCTCGCCTA CGCCACCGGC AAGAACAAGG ACTTCGCCGA CCTGGGCAAC CCGAGATACT TCAGCTGGGA CGACAAGCGC GCCGGAACCG AGGTGGGTGA TAATGACCGT GACACCGCCA CTGATTCAAC TCCACTGTTC ATGGCAAATT TTGAAATCTT GGGATGGTTA TGAAGTGAAT TTTTGTGGTG TTTTGTTTGA GTTTCAGGTT CTTTTGTCGA GGGTGAGCTT CTTTGCTTCG CAAGGATCAG ACGTTGCACA AGACGATGTT CTTGGGATGT ACAAGCAGAC TGCTGATGCC GTCATGTGCA TTCTCCTGCC GGATTCAGAG ACCGCCGCTT TCAGAACAGA AGGTAAATAT TCACAAGATT CAGAAGCAAA AATAAAAAAA GCAATCTCAG GTTCACCATT TGTGTAGCTG GTAATAATAA TAATCCAGTA GTATTTCAGA TAGCTTGCAA CGATTTATTT CAGGTGGTTT GCTGTACGTT GCCGAGTGGA ACTCACTCCA GCACCCGGTG GCATCGGCGT TCCTCGCCGC GGTTTACAGC GACTACATGC AGAGCTCCGG GAAGACGGAG CTGAGCTGCA GCGGGCAGGG CTTCTCGCCG GCCGACCTGC GCAAATTCGC CAAGTCCCAG GTAGTAACAA GATTCAGAAT CATCCATGAA CCAGAGTTCA CAATTGTTCA GACTAACATA TGTTCAGAGA GAACAGAAAT GTTCAGAAAT ACAGTACGTA ACTTGGATGT GATCACGCAC TGATCAGTGA TCTTTGTTCT TGGCAGGCGG ATTACTTGCT AGGCAGCAAC CCGATGAAGA TTAGTTACCT AGTCGGGTAC GGCGACCGGT ACCCGGAGAA GGTGCACCAC CGCGGCGCGT CCATCCCGGA GGACGTCGAC ACCGGCTGCG ACGGCCACAA GTGGCTGGAG ACGTCCAAGC CCAACCCAAA CGTCGCCACC GGCGCGCTCG TCGGCGGTCC GTACAAGAAC GACAGCTTCG TCGACGAGCG CGACAACGTG ATGCAGAACG AGGCCACCAC CTACAACAGC GCCCTCGTCG CCGGCTTGCT CTCCGCCCTC GTCTCCACCT CCTCCCTCGC GCGATCCTTG TCATGATCTG CATTGCTCGG ATTCTGACGG TTTACCACTC ATTAGATGGC ATGCAAATGC TGGCTCAAAC TGATGAAGAA ATGGTAGGGA GGATGTTGTA TCATGGATCG AAGAAGTCGG TGATCTGTAT GTGAAAAGGG TAATTAGTAC TGTACTAGTA CTTATACTTA CTAACAAAAA TAATCATTAG AAACTACTTT TGTTTGTTC