Os07t0581700-01

Locus

Os07g0581700

Description

Homeodomain-leucine zipper (HD-Zip) transcription factor, Regulation of panicle development

RAP-DB Gene Symbol Synonym(s)

Oshox14

RAP-DB Gene Name Synonym(s)

homeobox gene 14

CGSNL Gene Symbol

HOX14

CGSNL Gene Name

HOMEOBOX GENE 14

Oryzabase Gene Symbol Synonym(s)

Oshox14, OsHox14

Oryzabase Gene Name Synonym(s)

rice homeobox gene 14, Homeobox-leucine zipper protein HOX14, Homeodomain transcription factor HOX14, HD-ZIP protein HOX14

Transcript Evidence

AK121889

Protein Evidence

Q7XI85

Literature

PMID: 30028850

Note

Manual Curation

September 21, 2018

Gene Ontology (GO)

Biological Process: regulation of transcription, DNA-templated (GO:0006355)

Molecular Function: DNA binding (GO:0003677)

Molecular Function: sequence-specific DNA binding (GO:0043565)

Functional domain (InterPro)

Homeobox-like domain superfamily (IPR009057)

Homeobox domain (IPR001356)

Helix-turn-helix motif (IPR000047)

Homeobox, conserved site (IPR017970)

Experimentally confirmed subcellular location

nucleus (GO:0005634)

Full-length cDNA

J033105B17 (Online Clone Ordering)

Expression Databases

TENOR (Os07t0581700-01)

RiceXPro (AK121889)

Others

Oryzabase (8450)

KEGG (Os07t0581700-01)

Transcript

1131 bp

>Os07t0581700-01 Homeodomain-leucine zipper (HD-Zip) transcription factor, Regulation of panicle development
GTGGTGGTGGTGGTGCGTGGTCCTCTTCTCCATCCAGAGACAATCCAGTTCAGTTCAGTT
TCCTCTCTCCCTCCTGTCCTCACCTCACGCTTGACAAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGGCTGAACTGAGCTGAGCTGATC
GAGCTAGTGTGCGAGACGGCATGGACCGATACGGCGAGAAGCAGCAGCAGCAGCAGATGT
TTGCCTCCTACGTGGACGCCTCCCTCCTAGCAGCCAGCGGTGAGGTGCAGGGCGAGAGGC
CGAGAGCGCGGAGGAGGAGGAGGCGTGGGGCGAGGTGCGTTGGCGGCGGCGGCGGTGGTG
GCGAGGTGGACGGAGGGGACCCGAAGAAGCGGCGGCTGAGCGACGAGCAGGTGGAGATGC
TGGAGCTGAGCTTCCGGGAGGAGCGGAAGCTGGAGACCGGGCGGAAGGTGCACCTTGCCT
CCGAGCTCGGGCTCGACCCCAAGCAGGTGGCCGTCTGGTTCCAGAACCGCCGCGCCCGCC
ACAAGAGCAAGCTGCTCGAGGAGGAGTTCTCCAAGCTCAAGCACGCCCACGACGCCGCCA
TCCTCCACAAATGCCACCTCGAGAACGAGGTGCTGAGGCTGAAGGAGAGGCTGGTGGTCG
CCGAGGAGGAAGTGAGGCGGCTCAGATCAGCGGCGGGGAGCCACACGGCCTCCGGAGAAG
GCGGAGACATCATGGGCTTAGGCGGCAGCGGCGCCTGCGTCGCCGGGAGCCCGAGCTCGT
CGTTCTCGACGGGTACCTGCCAGCCGCCGAGCTTCGGCGGCGGAGATCACCTCGGAGACG
ATGACCTGGTGTATGTCCCGGAGTACGGCGGCTACGCTGATAACAGTGTGGTTGAGTGGT
TCAGCCTGTATGGATTGATCTAACGAAGATCAAGTTGATGATGGCATGTGCGGGGAATTT
AGTTAGTCATAGTGTTAATTAAGCTGTATGGTGATCGATCGAACTGATATGGTCAGCTCT
AAGTGTGTGTGTTTAATTATGTACATAAAGTGATTAATGGCAAAACCTGGCCAGCTAGCT
AGTAATGTATTAATATTAGTAGTTCGCTTAAAAAAGATCAGATGTGTGTTC

CDS

723 bp

>Os07t0581700-01 Homeodomain-leucine zipper (HD-Zip) transcription factor, Regulation of panicle development
ATGGACCGATACGGCGAGAAGCAGCAGCAGCAGCAGATGTTTGCCTCCTACGTGGACGCC
TCCCTCCTAGCAGCCAGCGGTGAGGTGCAGGGCGAGAGGCCGAGAGCGCGGAGGAGGAGG
AGGCGTGGGGCGAGGTGCGTTGGCGGCGGCGGCGGTGGTGGCGAGGTGGACGGAGGGGAC
CCGAAGAAGCGGCGGCTGAGCGACGAGCAGGTGGAGATGCTGGAGCTGAGCTTCCGGGAG
GAGCGGAAGCTGGAGACCGGGCGGAAGGTGCACCTTGCCTCCGAGCTCGGGCTCGACCCC
AAGCAGGTGGCCGTCTGGTTCCAGAACCGCCGCGCCCGCCACAAGAGCAAGCTGCTCGAG
GAGGAGTTCTCCAAGCTCAAGCACGCCCACGACGCCGCCATCCTCCACAAATGCCACCTC
GAGAACGAGGTGCTGAGGCTGAAGGAGAGGCTGGTGGTCGCCGAGGAGGAAGTGAGGCGG
CTCAGATCAGCGGCGGGGAGCCACACGGCCTCCGGAGAAGGCGGAGACATCATGGGCTTA
GGCGGCAGCGGCGCCTGCGTCGCCGGGAGCCCGAGCTCGTCGTTCTCGACGGGTACCTGC
CAGCCGCCGAGCTTCGGCGGCGGAGATCACCTCGGAGACGATGACCTGGTGTATGTCCCG
GAGTACGGCGGCTACGCTGATAACAGTGTGGTTGAGTGGTTCAGCCTGTATGGATTGATC
TAA

Protein

240 aa

>Os07t0581700-01 Homeodomain-leucine zipper (HD-Zip) transcription factor, Regulation of panicle development
MDRYGEKQQQQQMFASYVDASLLAASGEVQGERPRARRRRRRGARCVGGGGGGGEVDGGD
PKKRRLSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLE
EEFSKLKHAHDAAILHKCHLENEVLRLKERLVVAEEEVRRLRSAAGSHTASGEGGDIMGL
GGSGACVAGSPSSSFSTGTCQPPSFGGGDHLGDDDLVYVPEYGGYADNSVVEWFSLYGLI
*

5'UTR

chr07:23559527..23559726 (+ strand) : 200 bp

CDS

chr07:23559727..23559805 (+ strand) : 79 bp

chr07:23559923..23560272 (+ strand) : 350 bp

chr07:23560361..23560654 (+ strand) : 294 bp

3'UTR

chr07:23560655..23560862 (+ strand) : 208 bp

FASTA

>Os07t0581700-01 class=Sequence position=chr07:23559527..23560862 (+ strand)
GTGGTGGTGG TGGTGCGTGG TCCTCTTCTC CATCCAGAGA CAATCCAGTT CAGTTCAGTT TCCTCTCTCC CTCCTGTCCT
CACCTCACGC TTGACAAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAAAGGC
TGAACTGAGC TGAGCTGATC GAGCTAGTGT GCGAGACGGC ATGGACCGAT ACGGCGAGAA GCAGCAGCAG CAGCAGATGT
TTGCCTCCTA CGTGGACGCC TCCCTCCTAG CAGCCAGCGG TTCGTGCTAC TTAGCTTTTG CTTGCTAGCT CCCGCCATTT
TCTTGCCTCT CCATCTCATG GCAAGTGTCA ACTGTGTACT GATCATGCTG CCACGATCGA TCGATCTTTT TTTCAGGTGA
GGTGCAGGGC GAGAGGCCGA GAGCGCGGAG GAGGAGGAGG CGTGGGGCGA GGTGCGTTGG CGGCGGCGGC GGTGGTGGCG
AGGTGGACGG AGGGGACCCG AAGAAGCGGC GGCTGAGCGA CGAGCAGGTG GAGATGCTGG AGCTGAGCTT CCGGGAGGAG
CGGAAGCTGG AGACCGGGCG GAAGGTGCAC CTTGCCTCCG AGCTCGGGCT CGACCCCAAG CAGGTGGCCG TCTGGTTCCA
GAACCGCCGC GCCCGCCACA AGAGCAAGCT GCTCGAGGAG GAGTTCTCCA AGCTCAAGCA CGCCCACGAC GCCGCCATCC
TCCACAAATG CCACCTCGAG AACGAGGTAA CAACACATCG TCCGTCCTTG CATGTACACA CATGTATACT TATTGCTGCC
TCAATTCCTC TGATCCATCC ATGGCGGCAT GCAGGTGCTG AGGCTGAAGG AGAGGCTGGT GGTCGCCGAG GAGGAAGTGA
GGCGGCTCAG ATCAGCGGCG GGGAGCCACA CGGCCTCCGG AGAAGGCGGA GACATCATGG GCTTAGGCGG CAGCGGCGCC
TGCGTCGCCG GGAGCCCGAG CTCGTCGTTC TCGACGGGTA CCTGCCAGCC GCCGAGCTTC GGCGGCGGAG ATCACCTCGG
AGACGATGAC CTGGTGTATG TCCCGGAGTA CGGCGGCTAC GCTGATAACA GTGTGGTTGA GTGGTTCAGC CTGTATGGAT
TGATCTAACG AAGATCAAGT TGATGATGGC ATGTGCGGGG AATTTAGTTA GTCATAGTGT TAATTAAGCT GTATGGTGAT
CGATCGAACT GATATGGTCA GCTCTAAGTG TGTGTGTTTA ATTATGTACA TAAAGTGATT AATGGCAAAA CCTGGCCAGC
TAGCTAGTAA TGTATTAATA TTAGTAGTTC GCTTAAAAAA GATCAGATGT GTGTTC

Locus: Os07g0581700

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Locus: Os07g0581700

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