Locus
Os08g0286100
Description
Similar to predicted protein.
RAP-DB Gene Symbol Synonym(s)
RAP-DB Gene Name Synonym(s)
CGSNL Gene Symbol
CGSNL Gene Name
Oryzabase Gene Symbol Synonym(s)
OsPLL11, PLL11
Oryzabase Gene Name Synonym(s)
Pectate lyase-like 11
Transcript Evidence
BT087310 (DDBJ)
Protein Evidence
XP_002873391.1 (RefSeq)
Literature
Note
Manual Curation
Functional domain (InterPro)
Pectate lyase/Amb allergen (IPR002022)
Pectin lyase fold/virulence factor (IPR011050)
Pectin lyase fold (IPR012334)
AmbAllergen (IPR018082)
Expression Databases
TENOR (Os08t0286100-00)
Others
Oryzabase (22496)
KEGG (Os08t0286100-00 (EC:4.2.2.2))
Transcript |
1299 bp |
>Os08t0286100-00 Similar to predicted protein. ATGCTGTTAACAAACAATAACTCAGCAAAGCTGAAACTGTTTCCCTCCTTAAATGGAGAG CACACGACGCATTTGAAATCTATAAGAGGTGTCAATTCTCCGCGCCAGCAAGATCGAGGT CGAGCAAGCCCTTCCTCGATCATGGCCAACCGCAATGTACCAATGCTTCTGCCCCTCGCC GTCCTCTTCCTCCTCGGCAGCGGCGGCGTCGCCACCGCCGcgaacgtgatcgaccggtgc tggcgcggccagcgcaactgggccgccgaccggcagcgtctggccgtgtgctcggtgggc ttcgccggcaagatgcggcagaaccgcggcgccggcgtggtcgcctacacggtcaccgac ccgagcgacgaccccgtccggccgcggcccggcacgctccggtacggcgcgacggtgctg ccggcgaaggtgtggatcaccttcgcgcgcgacatgcgcatcaggctggcccagccgctg tacgtcaagaacttcaccaccatcgacggccgcggcgccgacgtgcacgtcgccggcggg gccggcatcgtgctgtaccacgcgagggacgtgatcgtccacggcctccacgtgcacgac tgccgcgcgcagccgccgggacgggtggtcgtcccgggtggcgccgtgcagccctccggc agcggcgacggcgacgccatccgcctggtggcgagctccaaggtgtggatcgaccacaac acgctgtcccgctgcgaggacggcctgctcgacgtcacggtcggctccaccgacgtcacc gtctccaacAACTGGTTCCACGACCACGACAAGGTGATGCTCCTCGGCCACGACGACGGC TTCACCACCGACCGCCGCATGCGCGTCACCGTCGCCTTCAACCGCTTCGGCCCAAACGTC AACCAGCGCATGCCAAGGATAAGGCACGGGTACGCGCACGTGGTGAACAACCTGTACGAT GGGTGGAGGGACTACGCCATTGGAGGGAGCATGGGGCCGAGCGTGAAGAGCCAGGGCAAC CTGTTCGCGGCGTCGGGCGGCGCCGGCGACAACAAGAAGGTGACGAGGAGGATGCCGGCC GTGGCGCGCGGCGGCGGCGGCGGCGGGAAGGATCAGTGGCACTTGCACTCGGTCGGCGAC GCCTTCGAGAACGGCGCGTTCTTCCGGCAGGTGGGCAACAGGGTGCGGCCCAACTACAAT CGGCACCAGGCCTTCTCGGCGGCGAGCGCCGGCGACGTAAGGGCGCTCACCGGCGGCGTC GGCGCTCTCACGTGCTCTGCCACGGCGGCGTGCTGACAA
CDS |
1296 bp |
>Os08t0286100-00 Similar to predicted protein. ATGCTGTTAACAAACAATAACTCAGCAAAGCTGAAACTGTTTCCCTCCTTAAATGGAGAG CACACGACGCATTTGAAATCTATAAGAGGTGTCAATTCTCCGCGCCAGCAAGATCGAGGT CGAGCAAGCCCTTCCTCGATCATGGCCAACCGCAATGTACCAATGCTTCTGCCCCTCGCC GTCCTCTTCCTCCTCGGCAGCGGCGGCGTCGCCACCGCCGcgaacgtgatcgaccggtgc tggcgcggccagcgcaactgggccgccgaccggcagcgtctggccgtgtgctcggtgggc ttcgccggcaagatgcggcagaaccgcggcgccggcgtggtcgcctacacggtcaccgac ccgagcgacgaccccgtccggccgcggcccggcacgctccggtacggcgcgacggtgctg ccggcgaaggtgtggatcaccttcgcgcgcgacatgcgcatcaggctggcccagccgctg tacgtcaagaacttcaccaccatcgacggccgcggcgccgacgtgcacgtcgccggcggg gccggcatcgtgctgtaccacgcgagggacgtgatcgtccacggcctccacgtgcacgac tgccgcgcgcagccgccgggacgggtggtcgtcccgggtggcgccgtgcagccctccggc agcggcgacggcgacgccatccgcctggtggcgagctccaaggtgtggatcgaccacaac acgctgtcccgctgcgaggacggcctgctcgacgtcacggtcggctccaccgacgtcacc gtctccaacAACTGGTTCCACGACCACGACAAGGTGATGCTCCTCGGCCACGACGACGGC TTCACCACCGACCGCCGCATGCGCGTCACCGTCGCCTTCAACCGCTTCGGCCCAAACGTC AACCAGCGCATGCCAAGGATAAGGCACGGGTACGCGCACGTGGTGAACAACCTGTACGAT GGGTGGAGGGACTACGCCATTGGAGGGAGCATGGGGCCGAGCGTGAAGAGCCAGGGCAAC CTGTTCGCGGCGTCGGGCGGCGCCGGCGACAACAAGAAGGTGACGAGGAGGATGCCGGCC GTGGCGCGCGGCGGCGGCGGCGGCGGGAAGGATCAGTGGCACTTGCACTCGGTCGGCGAC GCCTTCGAGAACGGCGCGTTCTTCCGGCAGGTGGGCAACAGGGTGCGGCCCAACTACAAT CGGCACCAGGCCTTCTCGGCGGCGAGCGCCGGCGACGTAAGGGCGCTCACCGGCGGCGTC GGCGCTCTCACGTGCTCTGCCACGGCGGCGTGCTGA
Protein |
431 aa |
>Os08t0286100-00 Similar to predicted protein. MLLTNNNSAKLKLFPSLNGEHTTHLKSIRGVNSPRQQDRGRASPSSIMANRNVPMLLPLA VLFLLGSGGVATAANVIDRCWRGQRNWAADRQRLAVCSVGFAGKMRQNRGAGVVAYTVTD PSDDPVRPRPGTLRYGATVLPAKVWITFARDMRIRLAQPLYVKNFTTIDGRGADVHVAGG AGIVLYHARDVIVHGLHVHDCRAQPPGRVVVPGGAVQPSGSGDGDAIRLVASSKVWIDHN TLSRCEDGLLDVTVGSTDVTVSNNWFHDHDKVMLLGHDDGFTTDRRMRVTVAFNRFGPNV NQRMPRIRHGYAHVVNNLYDGWRDYAIGGSMGPSVKSQGNLFAASGGAGDNKKVTRRMPA VARGGGGGGKDQWHLHSVGDAFENGAFFRQVGNRVRPNYNRHQAFSAASAGDVRALTGGV GALTCSATAAC*
CDS
chr08:11310539..11311455 (+ strand) : 917 bp
chr08:11311563..11311941 (+ strand) : 379 bp
3'UTR
chr08:11311942..11311944 (+ strand) : 3 bp
FASTA
>Os08t0286100-00 class=Sequence position=chr08:11310539..11311944 (+ strand) ATGCTGTTAA CAAACAATAA CTCAGCAAAG CTGAAACTGT TTCCCTCCTT AAATGGAGAG CACACGACGC ATTTGAAATC TATAAGAGGT GTCAATTCTC CGCGCCAGCA AGATCGAGGT CGAGCAAGCC CTTCCTCGAT CATGGCCAAC CGCAATGTAC CAATGCTTCT GCCCCTCGCC GTCCTCTTCC TCCTCGGCAG CGGCGGCGTC GCCACCGCCG cgaacgtgat cgaccggtgc tggcgcggcc agcgcaactg ggccgccgac cggcagcgtc tggccgtgtg ctcggtgggc ttcgccggca agatgcggca gaaccgcggc gccggcgtgg tcgcctacac ggtcaccgac ccgagcgacg accccgtccg gccgcggccc ggcacgctcc ggtacggcgc gacggtgctg ccggcgaagg tgtggatcac cttcgcgcgc gacatgcgca tcaggctggc ccagccgctg tacgtcaaga acttcaccac catcgacggc cgcggcgccg acgtgcacgt cgccggcggg gccggcatcg tgctgtacca cgcgagggac gtgatcgtcc acggcctcca cgtgcacgac tgccgcgcgc agccgccggg acgggtggtc gtcccgggtg gcgccgtgca gccctccggc agcggcgacg gcgacgccat ccgcctggtg gcgagctcca aggtgtggat cgaccacaac acgctgtccc gctgcgagga cggcctgctc gacgtcacgg tcggctccac cgacgtcacc gtctccaacA ACTGGTTCCA CGACCACGAC AAGGTGATGC TCCTCGGCCA CGACGACGGC TTCACCACCG ACCGCCGCAT GCGCGTCACC GTCGCCTTCA ACCGCTTCGG CCCAAACGTC AACCAGCGCA TGCCAAGGTA TAGCCACTAG CCACACACCC GGCCATGAAT AATCCGCCAC TGGAGGAGCT CGTGCTCGAG CTCGACATCG ATCGAACACC TGCTTGGCAT TACATTGGAT GCAGGATAAG GCACGGGTAC GCGCACGTGG TGAACAACCT GTACGATGGG TGGAGGGACT ACGCCATTGG AGGGAGCATG GGGCCGAGCG TGAAGAGCCA GGGCAACCTG TTCGCGGCGT CGGGCGGCGC CGGCGACAAC AAGAAGGTGA CGAGGAGGAT GCCGGCCGTG GCGCGCGGCG GCGGCGGCGG CGGGAAGGAT CAGTGGCACT TGCACTCGGT CGGCGACGCC TTCGAGAACG GCGCGTTCTT CCGGCAGGTG GGCAACAGGG TGCGGCCCAA CTACAATCGG CACCAGGCCT TCTCGGCGGC GAGCGCCGGC GACGTAAGGG CGCTCACCGG CGGCGTCGGC GCTCTCACGT GCTCTGCCAC GGCGGCGTGC TGACAA
Locus: Os08g0286100
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Locus: Os08g0286100
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