Locus
Os08g0535800
Description
No apical meristem (NAM) protein domain containing protein.
RAP-DB Gene Symbol Synonym(s)
RAP-DB Gene Name Synonym(s)
CGSNL Gene Symbol
CGSNL Gene Name
Oryzabase Gene Symbol Synonym(s)
ONAC005, ONAC5, ONAC035, ONAC35, ONAC046, ONAC46, ONAC052, ONAC52
Oryzabase Gene Name Synonym(s)
NAC domain-containing protein 005, NAC domain-containing protein 5, NAC domain-containing protein 35, NAC domain-containing protein 46, NAC domain-containing protein 52
Transcript Evidence
AK068776 (DDBJ, Best hit)
AK061543 (DDBJ, Best hit)
AK104766 (DDBJ, Best hit)
Protein Evidence
NP_001151483.1 (RefSeq)
Literature
Note
Manual Curation
Gene Ontology (GO)
Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
Molecular Function: DNA binding (GO:0003677)
Functional domain (InterPro)
No apical meristem (NAM) protein (IPR003441)
Full-length cDNA
J013160K11 (Online Clone Ordering)
006-311-A02 (Online Clone Ordering)
001-038-H11 (Online Clone Ordering)
Expression Databases
TENOR (Os08t0535800-02)
Others
Oryzabase (11457)
Transcript |
1523 bp |
>Os08t0535800-02 No apical meristem (NAM) protein domain containing protein. AACACCCAACCCCCTCTCTCTCTCTATCTCTCTCCTCTCTCTCTCTCTAGCTCTAGCTCT AGCTCGTCGCCGCCATGAACGTTCCAAGCAAATGCATGGCTCCTGCAAAGTAAAAAAAGA AGAAGAAGCAGCAGCTGCAGCTTCTCTTCAGTATCGATCTTTAACTGTATCGAGCTAGCT TAGCTTAGCTTAGCTCTCTGCCATTAACTTGTGCTTCACTGAGCTTGAGCTAGCTAGCTT CTTGGCTGTGTGACTGAGTAGCTCTAGCTCCTCGTCGTCGTCGTCGTCGTCGTCGTCGTC GGCGTCGGTGGTGGTGTGAATTGATAGAATTGATACGATGGAGAGGGCGGCTGCGGCGGC GCCGGTGGTGGTGAGGCATggaggagtggtgttgccgccggggttcaggttccacccgac ggacgaggagctcgtggtgcagtacctccgccgcaaggcgttcggcctgccgctccccgc cgccgtcatccccgacctccacaacctcttcaagctcgatccctgggacattcctgGTGC GAGCAGCGACGGGGACAAGTACTTCTTCGCCGTGCGGCCACCTGCGGCGAGGGGGAGGAG GCAGCATGTGACGGCGAGCGGTGGGTGCTGGAAGCCGGCGGGCGGGCGGGACAAGCCGGT GGTGGTGGCCCGGTGCGGCGGGAGCCACCTCGTCGGCGTCAAGAAGGGCATGGTGTTCGT CCCACGGCAAGGGAGGAAGGCACCGGCGGCGGCGGCGGCGGCCGCCGGCGGTGGCTGCTG GGTCATGCACGAGTACAGCCTCGCCCTGCCGATGCACAAGAAGGGTTGCTTGGCTGAGGC TGAAGAATGGGTAGTGTGCCGGATATTTCAGAGGAGCAGCAGCGGCAGCCGGTCGCCGAG GAGGCCTGACAACGACGTGAGGCGAACGATGCCGGCCGTCGCCGAGCTCGGCCGGTCGCC GTCGCCATCGTCGTCGTCGTCGCAATCCAGCTGCGTCACAAGCAGCTCCGACCAGGAAGA GGTCAGCAGCGGCTAGCTAGCTGAAGAAGAATGCAGGCAGCAGCAGCAAGCAGCTAAGCT GCCTCTCAAAGAGAGGCTTGAGTGTTAGCCTAGCTAAGCATATATATTTATAGCCGGCCA AACCCTCTGAAAGTGATCTGCATCAATGCATGCCCCCCTTTAATTTCTTCTTCCTCCTTA ATTATTTTTTCCCAACCATGTAATGTAATGTAATTTAATGTAATGCAGTGTAATGTAACG GGAAGGAAGCACTGAATTAATCAAATTAAATTAACAAATGAAGAGTGCTCAAAAGTCCAA GGAAGCTTCTAAGGTTCAGGAGCCAGATATTATCTACTTAATTAATTAATTATGGGCACA TATCTGTAGTTGCTAGCTAGCTGCATATGCATCTCGTCGTTGTCGATCCATTTGTAACTT GCAAGTTGTGTTGGTGTAATATTGTAATATTTTTCTCCGATGGTTGAGAAATTAATCTGA AATCCATTATAGCAATTAATTGC
CDS |
699 bp |
>Os08t0535800-02 No apical meristem (NAM) protein domain containing protein. ATGGAGAGGGCGGCTGCGGCGGCGCCGGTGGTGGTGAGGCATggaggagtggtgttgccg ccggggttcaggttccacccgacggacgaggagctcgtggtgcagtacctccgccgcaag gcgttcggcctgccgctccccgccgccgtcatccccgacctccacaacctcttcaagctc gatccctgggacattcctgGTGCGAGCAGCGACGGGGACAAGTACTTCTTCGCCGTGCGG CCACCTGCGGCGAGGGGGAGGAGGCAGCATGTGACGGCGAGCGGTGGGTGCTGGAAGCCG GCGGGCGGGCGGGACAAGCCGGTGGTGGTGGCCCGGTGCGGCGGGAGCCACCTCGTCGGC GTCAAGAAGGGCATGGTGTTCGTCCCACGGCAAGGGAGGAAGGCACCGGCGGCGGCGGCG GCGGCCGCCGGCGGTGGCTGCTGGGTCATGCACGAGTACAGCCTCGCCCTGCCGATGCAC AAGAAGGGTTGCTTGGCTGAGGCTGAAGAATGGGTAGTGTGCCGGATATTTCAGAGGAGC AGCAGCGGCAGCCGGTCGCCGAGGAGGCCTGACAACGACGTGAGGCGAACGATGCCGGCC GTCGCCGAGCTCGGCCGGTCGCCGTCGCCATCGTCGTCGTCGTCGCAATCCAGCTGCGTC ACAAGCAGCTCCGACCAGGAAGAGGTCAGCAGCGGCTAG
Protein |
232 aa |
>Os08t0535800-02 No apical meristem (NAM) protein domain containing protein. MERAAAAAPVVVRHGGVVLPPGFRFHPTDEELVVQYLRRKAFGLPLPAAVIPDLHNLFKL DPWDIPGASSDGDKYFFAVRPPAARGRRQHVTASGGCWKPAGGRDKPVVVARCGGSHLVG VKKGMVFVPRQGRKAPAAAAAAAGGGCWVMHEYSLALPMHKKGCLAEAEEWVVCRIFQRS SSGSRSPRRPDNDVRRTMPAVAELGRSPSPSSSSSQSSCVTSSSDQEEVSSG*
5'UTR
chr08:26766974..26767310 (+ strand) : 337 bp
CDS
chr08:26767311..26767509 (+ strand) : 199 bp
chr08:26767591..26767877 (+ strand) : 287 bp
chr08:26769636..26769848 (+ strand) : 213 bp
3'UTR
chr08:26769849..26770335 (+ strand) : 487 bp
FASTA
>Os08t0535800-02 class=Sequence position=chr08:26766974..26770335 (+ strand) AACACCCAAC CCCCTCTCTC TCTCTATCTC TCTCCTCTCT CTCTCTCTAG CTCTAGCTCT AGCTCGTCGC CGCCATGAAC GTTCCAAGCA AATGCATGGC TCCTGCAAAG TAAAAAAAGA AGAAGAAGCA GCAGCTGCAG CTTCTCTTCA GTATCGATCT TTAACTGTAT CGAGCTAGCT TAGCTTAGCT TAGCTCTCTG CCATTAACTT GTGCTTCACT GAGCTTGAGC TAGCTAGCTT CTTGGCTGTG TGACTGAGTA GCTCTAGCTC CTCGTCGTCG TCGTCGTCGT CGTCGTCGTC GGCGTCGGTG GTGGTGTGAA TTGATAGAAT TGATACGATG GAGAGGGCGG CTGCGGCGGC GCCGGTGGTG GTGAGGCATg gaggagtggt gttgccgccg gggttcaggt tccacccgac ggacgaggag ctcgtggtgc agtacctccg ccgcaaggcg ttcggcctgc cgctccccgc cgccgtcatc cccgacctcc acaacctctt caagctcgat ccctgggaca ttcctggtaC GAATTCTTGA CGACGACGAC GATGTCGAGA TGGCACCATG AATGCTTGTT GATTGATTCG GTGTATGTGT GATCCAGGTG CGAGCAGCGA CGGGGACAAG TACTTCTTCG CCGTGCGGCC ACCTGCGGCG AGGGGGAGGA GGCAGCATGT GACGGCGAGC GGTGGGTGCT GGAAGCCGGC GGGCGGGCGG GACAAGCCGG TGGTGGTGGC CCGGTGCGGC GGGAGCCACC TCGTCGGCGT CAAGAAGGGC ATGGTGTTCG TCCCACGGCA AGGGAGGAAG GCACCGGCGG CGGCGGCGGC GGCCGCCGGC GGTGGCTGCT GGGTCATGCA CGAGTACAGC CTCGCCCTGC CGATGCACAA GAAGGTGAGA AACCACTACT AATCAATCAT ATGAGCATAT GATTTCCTCC TTAATGATTG ATTAATCACT CTCTTGATGA CTAGTTGACT GCCAATTTGC CCATTTCTTC ATGCAAGAAC TGATTGTGTT TGTTGATTGA TTTGTTTTCT TTCTTGATAA ATCTTCTTGT GTTTCTGCAT GCATGCAACT CAAGTGAGCA AGCTTGATAA ATCTTCTTGA GCATTAATTT GGGATCCAAT ATTAAGCTCA AGCTAGCTTA GCTTAGCTTC TCAAAGTGCT ACTACTAGCT AACTTGATCA TATGTTTGCT TATCACTATT TTTATTAGTT ATTTTTAAAA TTACTAGCTA TATGGCTTTC AAGATCATGT CACATGCTCT CCATTAGCTT AAAGCTGTAT ATTTGTCTTA AATTACTAAT TAGATAATTC TGATAGCCAC AGCATAGGTA CAAATCAGTT AACCAGTCAA GTACTATGCT AGAATTTGCC AATAAATAAA ACAAAAAAAA CCCAGTTCAA CACAAACTTC TCAGCCATAA CTAATTAACC GAGGAGCATC ATACAAATTA ACACATACAG GCAGGGTACA GTCTGCACAT CAAACTGTCA CAACATGCTC ATTAATAGTC ATGATCAACA ACAACAATAA CTCGCAGTTT TAAATTGCTT CTGATGGTGG TTGCAATTCA TCCTGACATG GAGAGGTGGC TGTACTAGAT GCTCTCTGCT CATCAGATCG AATCGTCTCA TCAAGTTGTG CAGCTCCACT ACTACCAGTA TCTGCTAGTA CTAGTACTAC TAGCCACTCT CTTGCATATA TGCAAGAACC AACCAAACCA ACCCAGCAGC ATCCAATTAA GCTGACAAAC AAGTAGTACC TCAGGCTATT AATCATGTTT GTTGGGATTA CATTAACTAA TGCTTAATTA GCCAGAACAA CAGTGTTCCA TGCCTGCTCC TGTGTCTGAA CAAGCTGGGG CCTGTATATA TTTCAATGCT GTCCAGTAGA TCGACCAGTG CTGTTGTGGC CAGTTCTGTG GCCACTGTTG AAGATATGTG CAGTAGATGT TCATGCTCGT TTTGATTGAG AGAATCTTGA AATTAAAACA CCTTGCTGGC AATTAGTTTG ATTGACAAGC TGTACTTGAA TGCTACATCT CGTATATCTA CTTTTTTTTT TGAAGAAAGA TGCTTGAATG CCCTAGAATT CATGTAGTTA TATTTTCTGA AGTTTGATCG TAAATACATA TATAAAACCA TCTGAACTTG TTACATGAAA ATTATCATTG CAATTGTCAT TTAAAAAACT TTCATGATAT TAATTTTGCT AGTATATTTT AGTGTAAAAT TAATTAAATT AGCCTGGATT AGTACATAGT GTAGTAGGAG TAGCTAGTAC CATTCCTTGC AATATCACTA CTAATGCTAA CACTGTGTTT CACTGCTGTT GCTAGAACAG ACTGAACAGT AGGATTTGCA CTTGAATTTC AGCATATATT AAAAATAAAG TACAGAGGAT AGAATTCCAG AAGAAAGACC ATAAATTTTG AACAGTTTTT AGGTTGCTTA AGCTTGTGTG TCCTTTGTAA ACAATGTGAA AACTACAAAA GAGTATTTCA AGAAAAAAAA GGGAAAAATT AAAAAAAATG AGTACATGGA CAGAAACAAC TGAAGTTTTC AAACACAGCT AAAGCTGGAA TGTTCTTAGA TCGATGAAGC TGACATATTT TTTTTTCTGA TTTGTGTGAA CGATCTCTGC AGGGTTGCTT GGCTGAGGCT GAAGAATGGG TAGTGTGCCG GATATTTCAG AGGAGCAGCA GCGGCAGCCG GTCGCCGAGG AGGCCTGACA ACGACGTGAG GCGAACGATG CCGGCCGTCG CCGAGCTCGG CCGGTCGCCG TCGCCATCGT CGTCGTCGTC GCAATCCAGC TGCGTCACAA GCAGCTCCGA CCAGGAAGAG GTCAGCAGCG GCTAGCTAGC TGAAGAAGAA TGCAGGCAGC AGCAGCAAGC AGCTAAGCTG CCTCTCAAAG AGAGGCTTGA GTGTTAGCCT AGCTAAGCAT ATATATTTAT AGCCGGCCAA ACCCTCTGAA AGTGATCTGC ATCAATGCAT GCCCCCCTTT AATTTCTTCT TCCTCCTTAA TTATTTTTTC CCAACCATGT AATGTAATGT AATTTAATGT AATGCAGTGT AATGTAACGG GAAGGAAGCA CTGAATTAAT CAAATTAAAT TAACAAATGA AGAGTGCTCA AAAGTCCAAG GAAGCTTCTA AGGTTCAGGA GCCAGATATT ATCTACTTAA TTAATTAATT ATGGGCACAT ATCTGTAGTT GCTAGCTAGC TGCATATGCA TCTCGTCGTT GTCGATCCAT TTGTAACTTG CAAGTTGTGT TGGTGTAATA TTGTAATATT TTTCTCCGAT GGTTGAGAAA TTAATCTGAA ATCCATTATA GCAATTAATT GC
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