Os08t0557500-02

Locus

Os08g0557500

Description

Similar to predicted protein.

RAP-DB Gene Symbol Synonym(s)

RAP-DB Gene Name Synonym(s)

CGSNL Gene Symbol

CYP71

CGSNL Gene Name

CYCLOPHILIN 71

Oryzabase Gene Symbol Synonym(s)

OsCYP71, OsWD40-164, OsCYP-22, OsCYP71a, OsCYP71b

Oryzabase Gene Name Synonym(s)

cyclophilin 71, cyclophilin 22

Transcript Evidence

AK111941 (DDBJ, Best hit)

Protein Evidence

XP_002877347.1 (RefSeq)

Literature

Note

Manual Curation

Gene Ontology (GO)

Biological Process: protein folding (GO:0006457)

Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755)

Molecular Function: protein binding (GO:0005515)

Functional domain (InterPro)

Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (IPR002130)

WD40 repeat-like-containing domain (IPR011046)

Cyclophilin-like (IPR015891)

WD40/YVTN repeat-like-containing domain (IPR015943)

Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (IPR020892)

Full-length cDNA

001-021-E10 (Online Clone Ordering)

Expression Databases

TENOR (Os08t0557500-02)

RiceXPro (AK111941)

Others

Oryzabase (10077)

KEGG (Os08t0557500-02 (EC:5.2.1.8))

Transcript

1661 bp

>Os08t0557500-02 Similar to predicted protein.
TACTCATTCTGGTTCAAACGATCCCATCATCTCCAAAGAGATTCATGCTGGCCCAGTAAA
GGTTATGAAATATAACCATGTTCACGATGTTGTGATATCTGCTGATGCCAAAGGACTCTT
GGAATACTGGTCTCCGTCTACCCTCAAATTTCCAGAAGACGCGGTGAACTTTCGTTTAAA
AACAGACACAAATCTATTTGAAATCGCAAAATGCAAGACTAGCGTGTCTGCTATTGAGAT
GAGCAATGACGGCACTCAATTTGTTGTTACATCCCCTGATCGTAGGATACGGGTATTTTG
GTTCAAAACTGGGAAACTAAGACGTGTATATGATGAGTCCCTTGAGGTGGCACAAGATCT
GCAGAAAAGTGATATCCCGATGTATCGTCTTGATGCTATTGATTTTGGGCGAAGAATGGC
TGTTGAGAAGGAAATAGAAAAGACCGAAAATGTTCCACAGCCTAATGCTGTATTTGATGA
GAGCAGCAATTTTCTTATTTATGCTACCCTTTTGGGCATAAAGATTATAAATTTGCACAC
AAATAAGGTTTCAAGAATCCTGGGGAAGGTAGAAAACAATGAACGTTTTCTGAGGATTGC
TCTATACCAAGGTGATAAAGGGAATAAGAAGGTTAGAAAAATTCCTTCAGTAGCTGCCAA
TGTCAATGACAGCAAGGAGCCTTTATCTGACCCAACGCTGCTATGCTGTGCCTTCAAGAA
GCATCGAATATATCTCTTTAGTCGTAGAGAACCTGAGGAGCCTGAAGACGCAACCAAGGG
TAGGGATGTTTTCAATGAAAAACCCCCACCGGAAGAGCTTTTGGCTGTATCAGATTTAGG
GAAGACTGCTACAACATCACTCCCTGATAATTTGGTGATGCATACTTCTATGGGTGATAT
TCACTTGAGATTATATCCAGAAGAGTGTCCAAAAACTGTGGAGAATTTCACTACCCATTG
CCGGAATGGTTATTATGATAATCTCATATTTCATCGTGTGATTAAAGGCTTTATGATTCA
GACTGGAGACCCTTTGGGGGATGGCACTGGTGGGCAATCAATCTGGGGAAGGGAGTTCGA
AGATGAATTTCACAAAAGCTTGAGACATGATAGGCCTTTTACTCTTTCAATGGCCAATGC
TGGACCAAATACCAATGGGTCCCAATTCTTTATCACAACTGTGGCAACTCCATGGCTAGA
CAACAAACACACAGTGTTTGGTAGAGTTGTGAAAGGGATGGATGTTGTTCAGCAAATCGA
GAAGGTCAAGACCGACAAGAATGACAAACCATATCAGGATGTGAAGATCTTGAACGTTAC
AGTTCCAAAGACATAAGCTCAAACAATTGGTTTGACATTGTACGCATGAGGTTCTTCCAC
CCTTTGCAAGCCTGTGAAAGACAAATGTTCTGAACTTTATGTGCTGCTGTGGTGCATCGA
GTTGGTCCTTCAAACCTCAACCCAGAGGCAGCACCATATTATTAGAAAGCACTGCCTTTG
ATGAGGTATGTGTTCCGAGTTTTAACTAGCTTTCCCATCCATAACCCAAGGGCAATGGGA
CTGTAACATTTTTGCTGTACACGGGATTGGTATTGCAATTTAACAATGGAAAAAATGTAA
CGAGCCAGTTAGATGAGGATACATGGACGATTTTTCCATGC

CDS

1335 bp

>Os08t0557500-02 Similar to predicted protein.
ACTCATTCTGGTTCAAACGATCCCATCATCTCCAAAGAGATTCATGCTGGCCCAGTAAAG
GTTATGAAATATAACCATGTTCACGATGTTGTGATATCTGCTGATGCCAAAGGACTCTTG
GAATACTGGTCTCCGTCTACCCTCAAATTTCCAGAAGACGCGGTGAACTTTCGTTTAAAA
ACAGACACAAATCTATTTGAAATCGCAAAATGCAAGACTAGCGTGTCTGCTATTGAGATG
AGCAATGACGGCACTCAATTTGTTGTTACATCCCCTGATCGTAGGATACGGGTATTTTGG
TTCAAAACTGGGAAACTAAGACGTGTATATGATGAGTCCCTTGAGGTGGCACAAGATCTG
CAGAAAAGTGATATCCCGATGTATCGTCTTGATGCTATTGATTTTGGGCGAAGAATGGCT
GTTGAGAAGGAAATAGAAAAGACCGAAAATGTTCCACAGCCTAATGCTGTATTTGATGAG
AGCAGCAATTTTCTTATTTATGCTACCCTTTTGGGCATAAAGATTATAAATTTGCACACA
AATAAGGTTTCAAGAATCCTGGGGAAGGTAGAAAACAATGAACGTTTTCTGAGGATTGCT
CTATACCAAGGTGATAAAGGGAATAAGAAGGTTAGAAAAATTCCTTCAGTAGCTGCCAAT
GTCAATGACAGCAAGGAGCCTTTATCTGACCCAACGCTGCTATGCTGTGCCTTCAAGAAG
CATCGAATATATCTCTTTAGTCGTAGAGAACCTGAGGAGCCTGAAGACGCAACCAAGGGT
AGGGATGTTTTCAATGAAAAACCCCCACCGGAAGAGCTTTTGGCTGTATCAGATTTAGGG
AAGACTGCTACAACATCACTCCCTGATAATTTGGTGATGCATACTTCTATGGGTGATATT
CACTTGAGATTATATCCAGAAGAGTGTCCAAAAACTGTGGAGAATTTCACTACCCATTGC
CGGAATGGTTATTATGATAATCTCATATTTCATCGTGTGATTAAAGGCTTTATGATTCAG
ACTGGAGACCCTTTGGGGGATGGCACTGGTGGGCAATCAATCTGGGGAAGGGAGTTCGAA
GATGAATTTCACAAAAGCTTGAGACATGATAGGCCTTTTACTCTTTCAATGGCCAATGCT
GGACCAAATACCAATGGGTCCCAATTCTTTATCACAACTGTGGCAACTCCATGGCTAGAC
AACAAACACACAGTGTTTGGTAGAGTTGTGAAAGGGATGGATGTTGTTCAGCAAATCGAG
AAGGTCAAGACCGACAAGAATGACAAACCATATCAGGATGTGAAGATCTTGAACGTTACA
GTTCCAAAGACATAA

Protein

445 aa

>Os08t0557500-02 Similar to predicted protein.
THSGSNDPIISKEIHAGPVKVMKYNHVHDVVISADAKGLLEYWSPSTLKFPEDAVNFRLK
TDTNLFEIAKCKTSVSAIEMSNDGTQFVVTSPDRRIRVFWFKTGKLRRVYDESLEVAQDL
QKSDIPMYRLDAIDFGRRMAVEKEIEKTENVPQPNAVFDESSNFLIYATLLGIKIINLHT
NKVSRILGKVENNERFLRIALYQGDKGNKKVRKIPSVAANVNDSKEPLSDPTLLCCAFKK
HRIYLFSRREPEEPEDATKGRDVFNEKPPPEELLAVSDLGKTATTSLPDNLVMHTSMGDI
HLRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWGREFE
DEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQQIE
KVKTDKNDKPYQDVKILNVTVPKT*

5'UTR

chr08:27894635..27894635 (+ strand) : 1 bp

CDS

chr08:27894636..27894674 (+ strand) : 39 bp

chr08:27894769..27894890 (+ strand) : 122 bp

chr08:27895345..27895420 (+ strand) : 76 bp

chr08:27895518..27895625 (+ strand) : 108 bp

chr08:27895707..27895883 (+ strand) : 177 bp

chr08:27896201..27896418 (+ strand) : 218 bp

chr08:27896555..27896687 (+ strand) : 133 bp

chr08:27896826..27897049 (+ strand) : 224 bp

chr08:27897294..27897447 (+ strand) : 154 bp

chr08:27897539..27897622 (+ strand) : 84 bp

3'UTR

chr08:27897623..27897635 (+ strand) : 13 bp

chr08:27898458..27898769 (+ strand) : 312 bp

FASTA

>Os08t0557500-02 class=Sequence position=chr08:27894635..27898769 (+ strand)
TACTCATTCT GGTTCAAACG ATCCCATCAT CTCCAAAGAG GTAATCTGTT GTTGCTTTCT GTGTGTCGAT GTGTATTTCT
TGTGAATTAA AGTAACTAAA TGATTCTTAC TGCATGAGCT GCCTCTTTAT GCAGATTCAT GCTGGCCCAG TAAAGGTTAT
GAAATATAAC CATGTTCACG ATGTTGTGAT ATCTGCTGAT GCCAAAGGAC TCTTGGAATA CTGGTCTCCG TCTACCCTCA
AATTTCCAGA AGACGCGTAT GTTGTTTCTC TCTTGGAGTT ATTTTCAACG TTTGTGTAGC TTGTGGTTTT GTCTTCCCAA
AACATTGCAC TGAACCACCA AGTACTTGAG CCATGATTAC ACCTACCATT TCCTTTTCTG TTAAGTCTGC AGCTGGAACA
ATCCTAGGTG CTAATTAATC AACGAACCAG CTTTTTTTAA AAAAAGTTAG GTACTATTAT GTTTGGTGAA GATGCACTTA
ACTTAAAATC TTTTCTGATT CACTTTTGTT TCTTATAATA ACATATTATC CTACTTTAGT ATTTATGGAT TGTTTTTTCA
TTTCACCTGT CACTCTGGCA GTGTATAAGC TCTGGGTTGG TTCCTTTTGT AATGGCTATA TTTATATGTG CTAACAGCTG
TTCTGTCCCT CTTGGTGAAT GCATCAATCC ATCATCTTAT CAATGCATAT TGCTTTTGTT TTTTGTGCAG GGTGAACTTT
CGTTTAAAAA CAGACACAAA TCTATTTGAA ATCGCAAAAT GCAAGACTAG CGTGTCTGCT ATTGAGGTAC TTCTTCTATT
TGATTCTCAA GTTATTTGCA TTTGTTGCTT CATTATTGAT AGAGCTACAG GATTACTCTG ATAAACGAGC TTGTGTTGTC
CAGATGAGCA ATGACGGCAC TCAATTTGTT GTTACATCCC CTGATCGTAG GATACGGGTA TTTTGGTTCA AAACTGGGAA
ACTAAGACGT GTATATGATG AGTCCCTTGA GGTAAGAAAT TCCATCTGTA CAATGCATGG TACAGATAAA TATGTTCTGT
TATAATCCCC AACTGAATGC TGTCAATTAT AGGTGGCACA AGATCTGCAG AAAAGTGATA TCCCGATGTA TCGTCTTGAT
GCTATTGATT TTGGGCGAAG AATGGCTGTT GAGAAGGAAA TAGAAAAGAC CGAAAATGTT CCACAGCCTA ATGCTGTATT
TGATGAGAGC AGCAATTTTC TTATTTATGC TACCCTTTTG GGCATAAAGG TATGCTATTT TTTTACTGCA CATCTTTTCT
TTTATGTAGT ATGTGTTTGA TATCATTATA TGTACTTCAG TTATTTATAT AATTATTTTT TATGTTCGGA ATGATAAATG
TTGCTCAAGA AAATATTTGT CCTTGTGGAA TTCCATCTTA TGGATCAGCT GCTAGTTAAA CAGCATGTTT TGTATTAGCT
TTCTAGCAGC TTGTTTTGTA TTCATTATGC TCCTATCTAG CTGTTGAGTT CATGTAAATA TCTGGCATGT TGCTATTGTT
GAACATATTT CTGTATGATT AATTCTGATT TCCCATAAAT ATGCAGATTA TAAATTTGCA CACAAATAAG GTTTCAAGAA
TCCTGGGGAA GGTAGAAAAC AATGAACGTT TTCTGAGGAT TGCTCTATAC CAAGGTGATA AAGGGAATAA GAAGGTTAGA
AAAATTCCTT CAGTAGCTGC CAATGTCAAT GACAGCAAGG AGCCTTTATC TGACCCAACG CTGCTATGCT GTGCCTTCAA
GAAGCATCGA ATATATCTCT TTAGGTACAT CAATTCAATG ATCTTTGGAT AGGTCGTATT GGCTGATTCC GCATGCTGCT
TCTGTAGACT CCTTTCTCTC CAGATGGTTT TTCTTAAATT TTAATATCCC GCTTCTCAAT CCTCTTTTTT CATTATACAG
TCGTAGAGAA CCTGAGGAGC CTGAAGACGC AACCAAGGGT AGGGATGTTT TCAATGAAAA ACCCCCACCG GAAGAGCTTT
TGGCTGTATC AGATTTAGGG AAGACTGCTA CAACATCACT CCCTGATAAT TTGGTATGTT TTCTCAATCA TTTCTAAAAA
TGGTAATTTG CTACTATTGA TTTTATGGAA ATTTGATATC TTGGTGGGAT AGTCTTTGAA CATTTTTCCT TTTTAGGTCG
CATTTATTTA CATGAGTATT TCCTATTTCA GGTGATGCAT ACTTCTATGG GTGATATTCA CTTGAGATTA TATCCAGAAG
AGTGTCCAAA AACTGTGGAG AATTTCACTA CCCATTGCCG GAATGGTTAT TATGATAATC TCATATTTCA TCGTGTGATT
AAAGGCTTTA TGATTCAGAC TGGAGACCCT TTGGGGGATG GCACTGGTGG GCAATCAATC TGGGGAAGGG AGTTCGAAGA
TGAATTTCAC AAAAGGTATA TAAGTTGTAT GCCTTTTCCT GTTTTTCTTT TCTCATTTGC AGAAAACAAT GCAGTTTTTC
ATCTTATGTA CCGTTTAGAT GACAGATGTC TATGCAAGGT CCAGGAAAGA TATCTGTATA GTCATGTAAA TTTTGCATGC
ACTGTGCTTA TTGTTGTTGA AGAGAACACA ATCCATATGA ATAATCCTAT TTGAATATGC TTATAGTGAC AACTGACAGC
TATGGCGGCT ATCTTGCAGC TTGAGACATG ATAGGCCTTT TACTCTTTCA ATGGCCAATG CTGGACCAAA TACCAATGGG
TCCCAATTCT TTATCACAAC TGTGGCAACT CCATGGCTAG ACAACAAACA CACAGTGTTT GGTAGAGTTG TGAAAGGGAT
GGATGTTGTT CAGGTACCAG CCTTTTTGAC CAACTTAGTG ACTGTGTGTG AATTTTCATA TCCTTTATTG TGCTTCCTAA
TATGTTTTGT TTTAAACTTA AAAGCAAATC GAGAAGGTCA AGACCGACAA GAATGACAAA CCATATCAGG ATGTGAAGAT
CTTGAACGTT ACAGTTCCAA AGACATAAGC TCAAACAATT GGTCAGTTTT TCTGCTCTTG ATACCATAAT CTAACCTCAT
AATTCATTTT GTTTTGGGGA TTGTCTTGAA CAAGTGACTT TGCTTGGTGT TTTCCTACAA AATACATACA ATGCAAACTA
ATCCTTAACT GGCACAGATG TCTTGTGAAC ATTAATTTTT TTAAATTGTT CCCttttcta aagttaccta ctacctccat
ccacaaatat aagcatttct agcatttgaa atttgtacat ttctggagta ctactTTCCC AATCCAACCA CCGCTGCATT
TATTGCTCAC TTAGTTGTAT TTCTAGGCAT GGTATTTTCC CTATCAAGTA GAGTCCCAGG GGCATCAAAT TAATTTCACC
TAAACCTTAT TTTCTGTTAA AATCCTAGAA GTGATTATAT TTGTGGATGG AAAGAATATA GTACATACAT TAAGATAATA
CTGCCAGTTG CAACAACATT AAGAATATAG CCTGCTTTAC TTATGTGGTT ATCAAAGCTA ATTTCATAAT GGTTTGTTGG
GTTAGACCTA AATACTTCTA AATTTACTTT AGGAGGTCAT CTTTGCTAGA CAACCTGTAG GAAAACCAAG CATCCAGTGA
CCAGTGGTGC TCTTTATTAT TACCTTGTGT TATCCCCTGT TTGCCATGGG ATTGTTCTCT CTCTCTCTCT CTCTCTCTCT
CTCTCTCTCT CTCTTTTTCA TGTGGACTGT ATGAAGAACG GTTCCATTTC TTTATCACCA GTTTCATGTT GACTGTATGG
AGAACGGTTC CATTTCTTGT ATCACCAGTG CTCTCATGTG GTCATTTCGT GTGCCTTCTG CAGGTTTGAC ATTGTACGCA
TGAGGTTCTT CCACCCTTTG CAAGCCTGTG AAAGACAAAT GTTCTGAACT TTATGTGCTG CTGTGGTGCA TCGAGTTGGT
CCTTCAAACC TCAACCCAGA GGCAGCACCA TATTATTAGA AAGCACTGCC TTTGATGAGG TATGTGTTCC GAGTTTTAAC
TAGCTTTCCC ATCCATAACC CAAGGGCAAT GGGACTGTAA CATTTTTGCT GTACACGGGA TTGGTATTGC AATTTAACAA
TGGAAAAAAT GTAACGAGCC AGTTAGATGA GGATACATGG ACGATTTTTC CATGC

Locus: Os08g0557500

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Locus: Os08g0557500

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