Locus
Os09g0332300
Description
Similar to PDR20.
RAP-DB Gene Symbol Synonym(s)
RAP-DB Gene Name Synonym(s)
CGSNL Gene Symbol
PDR21
CGSNL Gene Name
PLEIOTROPIC DRUG RESISTANCE 21
Oryzabase Gene Symbol Synonym(s)
OsABCG46, OsPDR21
Oryzabase Gene Name Synonym(s)
ABC transporter superfamily ABCG subgroup member 46, pleiotropic drug resistance 21
Transcript Evidence
AK355919 (DDBJ)
Protein Evidence
A3BXL8 (UniProt)
Literature
Note
- Exon-intron structures, exon and CDS sequences are different between Build 5 and IRGSP-1.0.
Manual Curation
Gene Ontology (GO)
Cellular Component: membrane (GO:0016020)
Molecular Function: nucleotide binding (GO:0000166)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: ATPase activity (GO:0016887)
Molecular Function: nucleoside-triphosphatase activity (GO:0017111)
Functional domain (InterPro)
ABC transporter-like (IPR003439)
ATPase, AAA+ type, core (IPR003593)
ABC-2 type transporter (IPR013525)
Plant PDR ABC transporter associated (IPR013581)
Expression Databases
TENOR (Os09t0332300-00)
Others
Oryzabase (12019)
Transcript |
2586 bp |
>Os09t0332300-00 Similar to PDR20. ATGAATATATTGCAAAGATTAATGAAAACAATGCAATCTTGTAGATGTTTTAGACAATTC CTTGTGCTTTTTGTAATGTCCGAGGCAATATGTGGACTTTTCCGTTTCATTGCTGCTCTT ACAAGGCATCCAGTTGTTGCAAGCACCGTGAGTGAATTCTGTATACTAATAGTTATGGTT TCAAGCGGATTCATCCTATCAAGAGATGAAGTTAAAAAATGGCTGATATGGGAGTACTGG ACATCACCCCTGATGTATGCACTAAATGCCTTAGCAGTAAATGAATTCCTAAGTCCCAGC TGGAATGAGGCACTACCTGGTTTTAGAGAACCACTTGGAAGGTTAGTTCTGGAATCTCGT GGGGTTTTCCCGGAGGCCAAATGGTATTGGATTGGTCTTGGTGCCTTGCTTGGATATGTG CTTCTGTTCAATATCCTCTACACCATCTGCCTCTCAATTCTCACATTACTTAAAAGAAAT GTGCGAGAAATGTCTCAGGAAACATTGCAGATAAAACTAGAAAATTTAACCGGTTATGAT CAAGAGCCATCATCTGGAGGCCGAGTTACCAATGATAAAAGATACACTGAGGGTGGCAAC AATGATGAAGCAACTTCAAGCAATGCAAATCATAATTCTAGTCCAGCCAGGAAAGGAAGT ATCCTGCCTTTTGTACCCGTTTACATGACATTTGAAGATATAAGATACAGTATAGACATG CCAAAGGCACTGAAAGTACAGGGTATGGCAGGGAGTCGGTTGGAACTACTGAAGGATCTT AGTGGTTCATTTAGGCCAGGAGTGCTTACAGCACTTATGGGTATCAGTGGTGCAGGCAAG ACAACATTGTTGGATGTGTTAGCTGGGAGGAAGACCAGTGGACACATACATGGTAATATT ACTGTATCTGGCTATCCGAAGAAGCAAGAAACATTTTCTCGAGTTTCAGGATATTGTGAA CAAAATGATATCCATTCACCAAATCTAACTGTCTATGAATCCCTTATGTTCTCAGCATGG CTTAGATTACCAGCCGAAATTGATTCTATGGCAAGAAAGAGATTTATTGATGAGTTCATG GAGCTTGTGGAGCTCTTTCCCTTAAAAGATGCATTGGTTGGATTGCTTGGCTTGAGTGGA TTATCAACTGAACAAAGGAAACGGCTAACAATAGCAGTGGAACTAGTTGCAAACCCATCT ATCATATTCATGGATGAACCAACATCTGGACTTGATGCACGAGCAGCAGCCATTGTCATG AGGACAGTAAGGAATATTGTGGACATGGGAAGAACTGTTGTTTGCACAATCCACCAACCT AGTATTGATATATTTGAATCATTTGATGAGCTCTTCCTAATGAAAAGAGGAGGTGAAGCA ATTTATGTAGGTCCATTAGGACAACATTCATGTGAATTGATCAAATATTTTGAGTCTATT GAAGGTGTCAGGAAGATAAAACATGGCTACAATCCTTCAACATGGATGCTGGAAGTGACT TGTACATTGCAGGAACAGATAACTGGGGTTAACTTTACTCAAGTATACAAGAATTCTGAA CTATATAGGAGGAACAAAAATTTGATAAAGGAGTTAAGCACACCCCATGACGGTTCAAGC GACTTATTGTTTCCAACTAAATATTCACAGACCTTTGTTATACAATGTTTGGCTTGCCTC TGGAAGCAACGTTTGTCATATTGGAGGAATCCTCCATATATTGCTGTGAATTTCTTCTTC ACCGTTGTAATTGCACTATTGTTTGGAACAATGTTCTGGGGCGTTGGTAGAAAAAGGCAA AGTCAACAAGCCTTGCTCAGTGCCATGGGTTCCATGTATTCCACATGTTTCACTCTAGGA GTGCAGAACTCTTCTTCAGTTCAACCAGTTGTCAATATTGAACGCACGGTCTTTTACAGG GAAAGAGCATCTCACATGTACTCGCCTTTGCCATATGCCTTGGGGCAGGTTGTAGTTGAA CTTCCTTACATCTTCCTCCAAACCTTGATATATGGTGTGATAGTGTATTCTATGATGGGA TACGAGTGGACATGCACCAAGTTTTTTTGGTACATGTTCTTCATGTACTTCACTCTATCA TACTTCACATTTTATGGCATGATGGCGGCAGGTCTAACTCCAAACTACACCATGTCCTCT ATTGTTTCCACAACTTTCTATGCCATATGGCACCTTTTCTCTGGATTTCTAATACCAAAA ACAAGAATTCCAATATGGTGGAGATGGTACTATTGGATTTGCCCTGTTGCATGGACAATC AATGGGTTGGTTACTTCACAGTTTGGGGATGTAGATGACAAGTTTGATAACGGTGTGCGT GTATCTGACTTTGTTGAGAGCTACTTTGGTTACAATCTTGACTTGTTATGGGTGGCTGCT ATGGCCGTTGTGTCATTTGCAATTCTTTTTGCCATCCTTTTCGGATTCTCACTTAAGCTA TTCAACTTCCAAAAGAGATAATTCATATGTACTAGAGTTTCATAATTTGATTAGCCCGGA TAAAACACATATTATAATAGAAGATATTTTCAATAATTTTAAAGTATTTAAATAATAGCA GATAGC
CDS |
2481 bp |
>Os09t0332300-00 Similar to PDR20. ATGAATATATTGCAAAGATTAATGAAAACAATGCAATCTTGTAGATGTTTTAGACAATTC CTTGTGCTTTTTGTAATGTCCGAGGCAATATGTGGACTTTTCCGTTTCATTGCTGCTCTT ACAAGGCATCCAGTTGTTGCAAGCACCGTGAGTGAATTCTGTATACTAATAGTTATGGTT TCAAGCGGATTCATCCTATCAAGAGATGAAGTTAAAAAATGGCTGATATGGGAGTACTGG ACATCACCCCTGATGTATGCACTAAATGCCTTAGCAGTAAATGAATTCCTAAGTCCCAGC TGGAATGAGGCACTACCTGGTTTTAGAGAACCACTTGGAAGGTTAGTTCTGGAATCTCGT GGGGTTTTCCCGGAGGCCAAATGGTATTGGATTGGTCTTGGTGCCTTGCTTGGATATGTG CTTCTGTTCAATATCCTCTACACCATCTGCCTCTCAATTCTCACATTACTTAAAAGAAAT GTGCGAGAAATGTCTCAGGAAACATTGCAGATAAAACTAGAAAATTTAACCGGTTATGAT CAAGAGCCATCATCTGGAGGCCGAGTTACCAATGATAAAAGATACACTGAGGGTGGCAAC AATGATGAAGCAACTTCAAGCAATGCAAATCATAATTCTAGTCCAGCCAGGAAAGGAAGT ATCCTGCCTTTTGTACCCGTTTACATGACATTTGAAGATATAAGATACAGTATAGACATG CCAAAGGCACTGAAAGTACAGGGTATGGCAGGGAGTCGGTTGGAACTACTGAAGGATCTT AGTGGTTCATTTAGGCCAGGAGTGCTTACAGCACTTATGGGTATCAGTGGTGCAGGCAAG ACAACATTGTTGGATGTGTTAGCTGGGAGGAAGACCAGTGGACACATACATGGTAATATT ACTGTATCTGGCTATCCGAAGAAGCAAGAAACATTTTCTCGAGTTTCAGGATATTGTGAA CAAAATGATATCCATTCACCAAATCTAACTGTCTATGAATCCCTTATGTTCTCAGCATGG CTTAGATTACCAGCCGAAATTGATTCTATGGCAAGAAAGAGATTTATTGATGAGTTCATG GAGCTTGTGGAGCTCTTTCCCTTAAAAGATGCATTGGTTGGATTGCTTGGCTTGAGTGGA TTATCAACTGAACAAAGGAAACGGCTAACAATAGCAGTGGAACTAGTTGCAAACCCATCT ATCATATTCATGGATGAACCAACATCTGGACTTGATGCACGAGCAGCAGCCATTGTCATG AGGACAGTAAGGAATATTGTGGACATGGGAAGAACTGTTGTTTGCACAATCCACCAACCT AGTATTGATATATTTGAATCATTTGATGAGCTCTTCCTAATGAAAAGAGGAGGTGAAGCA ATTTATGTAGGTCCATTAGGACAACATTCATGTGAATTGATCAAATATTTTGAGTCTATT GAAGGTGTCAGGAAGATAAAACATGGCTACAATCCTTCAACATGGATGCTGGAAGTGACT TGTACATTGCAGGAACAGATAACTGGGGTTAACTTTACTCAAGTATACAAGAATTCTGAA CTATATAGGAGGAACAAAAATTTGATAAAGGAGTTAAGCACACCCCATGACGGTTCAAGC GACTTATTGTTTCCAACTAAATATTCACAGACCTTTGTTATACAATGTTTGGCTTGCCTC TGGAAGCAACGTTTGTCATATTGGAGGAATCCTCCATATATTGCTGTGAATTTCTTCTTC ACCGTTGTAATTGCACTATTGTTTGGAACAATGTTCTGGGGCGTTGGTAGAAAAAGGCAA AGTCAACAAGCCTTGCTCAGTGCCATGGGTTCCATGTATTCCACATGTTTCACTCTAGGA GTGCAGAACTCTTCTTCAGTTCAACCAGTTGTCAATATTGAACGCACGGTCTTTTACAGG GAAAGAGCATCTCACATGTACTCGCCTTTGCCATATGCCTTGGGGCAGGTTGTAGTTGAA CTTCCTTACATCTTCCTCCAAACCTTGATATATGGTGTGATAGTGTATTCTATGATGGGA TACGAGTGGACATGCACCAAGTTTTTTTGGTACATGTTCTTCATGTACTTCACTCTATCA TACTTCACATTTTATGGCATGATGGCGGCAGGTCTAACTCCAAACTACACCATGTCCTCT ATTGTTTCCACAACTTTCTATGCCATATGGCACCTTTTCTCTGGATTTCTAATACCAAAA ACAAGAATTCCAATATGGTGGAGATGGTACTATTGGATTTGCCCTGTTGCATGGACAATC AATGGGTTGGTTACTTCACAGTTTGGGGATGTAGATGACAAGTTTGATAACGGTGTGCGT GTATCTGACTTTGTTGAGAGCTACTTTGGTTACAATCTTGACTTGTTATGGGTGGCTGCT ATGGCCGTTGTGTCATTTGCAATTCTTTTTGCCATCCTTTTCGGATTCTCACTTAAGCTA TTCAACTTCCAAAAGAGATAA
Protein |
826 aa |
>Os09t0332300-00 Similar to PDR20. MNILQRLMKTMQSCRCFRQFLVLFVMSEAICGLFRFIAALTRHPVVASTVSEFCILIVMV SSGFILSRDEVKKWLIWEYWTSPLMYALNALAVNEFLSPSWNEALPGFREPLGRLVLESR GVFPEAKWYWIGLGALLGYVLLFNILYTICLSILTLLKRNVREMSQETLQIKLENLTGYD QEPSSGGRVTNDKRYTEGGNNDEATSSNANHNSSPARKGSILPFVPVYMTFEDIRYSIDM PKALKVQGMAGSRLELLKDLSGSFRPGVLTALMGISGAGKTTLLDVLAGRKTSGHIHGNI TVSGYPKKQETFSRVSGYCEQNDIHSPNLTVYESLMFSAWLRLPAEIDSMARKRFIDEFM ELVELFPLKDALVGLLGLSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM RTVRNIVDMGRTVVCTIHQPSIDIFESFDELFLMKRGGEAIYVGPLGQHSCELIKYFESI EGVRKIKHGYNPSTWMLEVTCTLQEQITGVNFTQVYKNSELYRRNKNLIKELSTPHDGSS DLLFPTKYSQTFVIQCLACLWKQRLSYWRNPPYIAVNFFFTVVIALLFGTMFWGVGRKRQ SQQALLSAMGSMYSTCFTLGVQNSSSVQPVVNIERTVFYRERASHMYSPLPYALGQVVVE LPYIFLQTLIYGVIVYSMMGYEWTCTKFFWYMFFMYFTLSYFTFYGMMAAGLTPNYTMSS IVSTTFYAIWHLFSGFLIPKTRIPIWWRWYYWICPVAWTINGLVTSQFGDVDDKFDNGVR VSDFVESYFGYNLDLLWVAAMAVVSFAILFAILFGFSLKLFNFQKR*
CDS
chr09:9949123..9949327 (- strand) : 205 bp
chr09:9948905..9949008 (- strand) : 104 bp
chr09:9948675..9948831 (- strand) : 157 bp
chr09:9948458..9948574 (- strand) : 117 bp
chr09:9948222..9948364 (- strand) : 143 bp
chr09:9947770..9948102 (- strand) : 333 bp
chr09:9947381..9947671 (- strand) : 291 bp
chr09:9947163..9947246 (- strand) : 84 bp
chr09:9946946..9947079 (- strand) : 134 bp
chr09:9946181..9946408 (- strand) : 228 bp
chr09:9945897..9946068 (- strand) : 172 bp
chr09:9945495..9945749 (- strand) : 255 bp
chr09:9945093..9945350 (- strand) : 258 bp
3'UTR
chr09:9944988..9945092 (- strand) : 105 bp
FASTA
>Os09t0332300-00 class=Sequence position=chr09:9944988..9949327 (- strand) ATGAATATAT TGCAAAGATT AATGAAAACA ATGCAATCTT GTAGATGTTT TAGACAATTC CTTGTGCTTT TTGTAATGTC CGAGGCAATA TGTGGACTTT TCCGTTTCAT TGCTGCTCTT ACAAGGCATC CAGTTGTTGC AAGCACCGTG AGTGAATTCT GTATACTAAT AGTTATGGTT TCAAGCGGAT TCATCCTATC AAGAGGTACA CAAACTATCT GACAAAACAC GACATGATAT TGGCATTACT TCTGATATTA TTTCCACATG TGTTGGTACT TGTATACATA TTGTATGATA TGTTTGTTTG ATTTAACAGA TGAAGTTAAA AAATGGCTGA TATGGGAGTA CTGGACATCA CCCCTGATGT ATGCACTAAA TGCCTTAGCA GTAAATGAAT TCCTAAGTCC CAGCTGGAAT GAGGTAAAAA AAAACTTATG GAATCAATCG AAATCCATAT ATCATAATAT GTCCATTAAA AACATTTTGT TATCAGGCAC TACCTGGTTT TAGAGAACCA CTTGGAAGGT TAGTTCTGGA ATCTCGTGGG GTTTTCCCGG AGGCCAAATG GTATTGGATT GGTCTTGGTG CCTTGCTTGG ATATGTGCTT CTGTTCAATA TCCTCTACAC CATCTGCCTC TCAATTCTCA CATGTGAGTT AGAGAAAAAA ATGAATTTCT TATATTAGTA AAAGCTATTG TTGTTTTAAA AAGGGGCTAT ACATTCTAAA TTTATGCACC ATGTTCTCTG CAGTACTTAA AAGAAATGTG CGAGAAATGT CTCAGGAAAC ATTGCAGATA AAACTAGAAA ATTTAACCGG TTATGATCAA GAGCCATCAT CTGGAGGCCG AGTTACCAAT GATAAAAGAT GTAATTTTAT ATTCACCAAT ATAAAATACT ATATATCACA ATGAGATTTA ATTTAATAAA TTATATAACT TTCTTCTGTG TTATGTCTAC TAGACACTGA GGGTGGCAAC AATGATGAAG CAACTTCAAG CAATGCAAAT CATAATTCTA GTCCAGCCAG GAAAGGAAGT ATCCTGCCTT TTGTACCCGT TTACATGACA TTTGAAGATA TAAGATACAG TATAGACATG CCAAAGGTAC ACAAATATTC CTTTGTCTGG TCTTGACATG CATGTTCTAT CTATAAATCG CCTATAAACA TAACATTTAT GAGCAAACTC CATATATAAT TGTCTTTATC CAACAAAACA TGTAGGCACT GAAAGTACAG GGTATGGCAG GGAGTCGGTT GGAACTACTG AAGGATCTTA GTGGTTCATT TAGGCCAGGA GTGCTTACAG CACTTATGGG TATCAGTGGT GCAGGCAAGA CAACATTGTT GGATGTGTTA GCTGGGAGGA AGACCAGTGG ACACATACAT GGTAATATTA CTGTATCTGG CTATCCGAAG AAGCAAGAAA CATTTTCTCG AGTTTCAGGA TATTGTGAAC AAAATGATAT CCATTCACCA AATCTAACTG TCTATGAATC CCTTATGTTC TCAGCATGGC TTAGATTACC AGCCGAAATT GATTCTATGG CAAGAAAGGT TAGACATGAA AGAAACACTT TTTTGAACGT CAAGTAGTAT ATAAGTACGT ATCATGACAT GACATGCTAG TCTTTTTTCG TGTGCTTGGT TTGTAGAGAT TTATTGATGA GTTCATGGAG CTTGTGGAGC TCTTTCCCTT AAAAGATGCA TTGGTTGGAT TGCTTGGCTT GAGTGGATTA TCAACTGAAC AAAGGAAACG GCTAACAATA GCAGTGGAAC TAGTTGCAAA CCCATCTATC ATATTCATGG ATGAACCAAC ATCTGGACTT GATGCACGAG CAGCAGCCAT TGTCATGAGG ACAGTAAGGA ATATTGTGGA CATGGGAAGA ACTGTTGTTT GCACAATCCA CCAACCTAGT ATTGATATAT TTGAATCATT TGATGAGGTG AACAAAATTA TAGCAATATA GTGCATTTTC TCACACAGAT TTAATGGGTA TACAAGAAAA AAGTAAATCA CTGGTGGATT AACATTATTT GCATCCCACT CAATTCCTTC TGGTATTGTT CATATTTACA GCTCTTCCTA ATGAAAAGAG GAGGTGAAGC AATTTATGTA GGTCCATTAG GACAACATTC ATGTGAATTG ATCAAATATT TTGAGGTTAG AAAAAAATCG CATAATGTAA TACATGCTTG AATTTTTGCA CTCAGAAACA TGCTATTGAA CTGCTTTCAT TTTTAAAGTC TATTGAAGGT GTCAGGAAGA TAAAACATGG CTACAATCCT TCAACATGGA TGCTGGAAGT GACTTGTACA TTGCAGGAAC AGATAACTGG GGTTAACTTT ACTCAAGTAT ACAAGAATTC TGAACTATAT AGGTAGGGAT GGGGTCATCC TTTAGTTAAT AGTCTGACTA TATACCTTTA ATCGTTGCTC CAGCAACAGA AAACCTAGAT GAAAATCAAA CTTTGTGTGA TGTGCAAGAT GTCTGGTTCC ATAATGGTAT ATGTGATAAA TGTGTCCATG TTTGTGGTAT GTAGAAAATA CTTTGTTCTA TCATTAGTTA CTTAAGTATA GGTTGAAAAA AGAGAAGACA ATGGTGTCCT TTTATGCATG TCTAAACAAT TTTCAACAAG CTGGGGAAAC AACTAAAATT ACAAATATGA TATTCTGAAA AAACAATAAT ATAAGTTTTT TTCAATATTA GTAAAGAAAT GAAATAACAA TACAAGGTAG TGGCAAAAGC AAAAAATATC CCTACATGAA TCATATATTG TGATGATATC ATAATGCTAA ACTACAGATG CTTCAAAAGA TCTGCAATTT ACACTTTTAT AATGAATGTT TCAAATATAT GAAAAATTTA ATAGGTAATG TTATTGTTTG ATGATATTAG TGCTTTGTTT TCCCTACAGG AGGAACAAAA ATTTGATAAA GGAGTTAAGC ACACCCCATG ACGGTTCAAG CGACTTATTG TTTCCAACTA AATATTCACA GACCTTTGTT ATACAATGTT TGGCTTGCCT CTGGAAGCAA CGTTTGTCAT ATTGGAGGAA TCCTCCATAT ATTGCTGTGA ATTTCTTCTT CACCGTTGTA ATTGCACTAT TGTTTGGAAC AATGTTCTGG GGCGTTGGTA GAAAAAGGTA AATATATATA ACAATAAACA CAAGGAAATA TTTTATATTT GTGATTTTCT TTACAGATTT TAAAGGTTGC CATTGGACCA TGCTTACCCT AAATATTCCT TTCTCATAGG CAAAGTCAAC AAGCCTTGCT CAGTGCCATG GGTTCCATGT ATTCCACATG TTTCACTCTA GGAGTGCAGA ACTCTTCTTC AGTTCAACCA GTTGTCAATA TTGAACGCAC GGTCTTTTAC AGGGAAAGAG CATCTCACAT GTACTCGCCT TTGCCATATG CCTTGGGGCA GGTATGGTTC TTTGGCATCA TAGTGTTTAC ACATGAGGCT AGATATAATG TTTCAAGATT GTGTTCAATT TCTACAAAAC TAAAACCCTT GGTAAGTGGA CAGAAATGAT AAATGAATAA GCTTTGTTAA CATCTAGTTC TATTGCAGGT TGTAGTTGAA CTTCCTTACA TCTTCCTCCA AACCTTGATA TATGGTGTGA TAGTGTATTC TATGATGGGA TACGAGTGGA CATGCACCAA GTTTTTTTGG TACATGTTCT TCATGTACTT CACTCTATCA TACTTCACAT TTTATGGCAT GATGGCGGCA GGTCTAACTC CAAACTACAC CATGTCCTCT ATTGTTTCCA CAACTTTCTA TGCCATATGG CACCTTTTCT CTGGATTTCT AATACCAAAA ACAGTTAAGT ATACTAGCTT TTCTCAAATA TCAATGTATA CAAGGTTCCT AGCCAAATTA TCTCAAAGCC AAGACTAGAA AAAAAATTAA GAAGTACTAC CAAACTTCAC TCCTAGTTTT CCTAAATATG GCTCCTTTTA TCTGCAGAGA ATTCCAATAT GGTGGAGATG GTACTATTGG ATTTGCCCTG TTGCATGGAC AATCAATGGG TTGGTTACTT CACAGTTTGG GGATGTAGAT GACAAGTTTG ATAACGGTGT GCGTGTATCT GACTTTGTTG AGAGCTACTT TGGTTACAAT CTTGACTTGT TATGGGTGGC TGCTATGGCC GTTGTGTCAT TTGCAATTCT TTTTGCCATC CTTTTCGGAT TCTCACTTAA GCTATTCAAC TTCCAAAAGA GATAATTCAT ATGTACTAGA GTTTCATAAT TTGATTAGCC CGGATAAAAC ACATATTATA ATAGAAGATA TTTTCAATAA TTTTAAAGTA TTTAAATAAT AGCAGATAGC
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