Os10t0483500-01

Locus

Os10g0483500

Description

FAD linked oxidase, N-terminal domain containing protein.

RAP-DB Gene Symbol Synonym(s)

RAP-DB Gene Name Synonym(s)

CGSNL Gene Symbol

CKX3

CGSNL Gene Name

CYTOKININ OXIDASE/DEHYDROGENASE 3

Oryzabase Gene Symbol Synonym(s)

OsCKX3, ckx3

Oryzabase Gene Name Synonym(s)

Putative cytokinin oxidase 3, cytokinin oxidase 3

Transcript Evidence

AK103272 (DDBJ, Best hit)

Protein Evidence

Q8LNV6 (UniProt)

Literature

Note

Manual Curation

Gene Ontology (GO)

Biological Process: cytokinin metabolic process (GO:0009690)

Biological Process: oxidation-reduction process (GO:0055114)

Molecular Function: catalytic activity (GO:0003824)

Molecular Function: UDP-N-acetylmuramate dehydrogenase activity (GO:0008762)

Molecular Function: oxidoreductase activity (GO:0016491)

Molecular Function: oxidoreductase activity, acting on CH-OH group of donors (GO:0016614)

Molecular Function: cytokinin dehydrogenase activity (GO:0019139)

Molecular Function: flavin adenine dinucleotide binding (GO:0050660)

Functional domain (InterPro)

FAD linked oxidase, N-terminal (IPR006094)

Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (IPR015345)

FAD-linked oxidase-like, C-terminal (IPR016164)

FAD-binding, type 2 (IPR016166)

FAD-binding, type 2, subdomain 1 (IPR016167)

FAD-linked oxidase, FAD-binding, subdomain 2 (IPR016168)

Full-length cDNA

J033124I10 (Online Clone Ordering)

Expression Databases

TENOR (Os10t0483500-01)

RiceXPro (AK103272)

Others

Oryzabase (8393)

KEGG (Os10t0483500-01)

Transcript

2187 bp

>Os10t0483500-01 FAD linked oxidase, N-terminal domain containing protein.
AAAACCTCATAGCCTCATCAGCTGATCACTGAGTGCCTTCTCCTTCTCCTCCTCCTTTAA
GAACCCTCTTCCCTGCCCATCCTTTTCTTCATCCCCTCAACTTTGCCTAAAAGGCAAGAA
CAAAGCCATATGATTCTCTGATCCCTTCTTCCAAGCTGCATCCCAACACAACACATTGTG
GTGACACAGCAAACATAATATACACACATCCTCTTCTTCTTCTACCACCCTCCATATTCC
TGCAAGAAACAACTGGAGGAAGAATCACTACTCCAACACCATGGAGGTTGCCATGGTCTG
CACAAGAGTTAACCTGCTCATCCTCATCCTTTCTCTCTGCTCCCCATACAAGTTTATACA
GAGCCCCATGGACTTTGGCCCTTTGAACCTCCTTCCCACCACCACCACTGCATCCAGTGA
CTTTGGTAGAATCCTCTTCCACTCCCCATCTGCAGTTCTAAAGCCCCAAGCTCCAAGGGA
TATATCCCTGCTTCTCAGCTTCCTCTCTGCCTCACCTCTTGGCAAGGTGACGGTGGCAGC
CAGGGGAGCAGGTCACTCCATCCATGGACAGGCACAGGCCCTTGATGGCATTGTAGTGGA
GATGAGCTCCTTGCCTTCTGAGATTGAATTCTACAGAAGAGGAGAAGGAGATGTTTCTTA
TGCTGATGTGGGTGGTGGAATCATGTGGATTGAGCTTCTGGAGCAGAGCTTGAAGCTTGG
GCTGGCTCCAAGGTCTTGGACTGATTACCTCTATCTCACCATTGGTGGAACCTTGTCCAA
TGCTGGCATCAGTGGGCAGACATTCAAGCATGGACCTCAGATTAGCAATGTTCTACAGCT
GGAAGTAGTCACAGGCAGGGGTGAGATTGTGACCTGTTCACCCACCAAGGATGCAGAGCT
ATTCAATGCTGTTCTTGGAGGCCTTGGGCAGTTCGGCATCATTACTAGGGCAAGGATCCT
GCTGCAGGAAGCTCCACAGAAAGTGAAGTGGGTTAGAGCCTTCTATGATGATTTCGCCAC
CTTCACCAAAGACCAGGAGTTGCTGGTGTCAATGCCGGTTTTGGTGGACTATGTGGAAGG
TTTCATCGTGTTGAATGAGCAATCCCTTCACAGCTCCTCCATTGCCTTCCCTACAAATGT
TGACTTCAACCCAGATTTTGGCACCAAGAACAACCCTAAGATCTACTACTGCATAGAGTT
TGCTGTCCACGATTACCAGAACAAGAACATCAATGTGGAACAGGTCGTGGAAGTCATCTC
AAGGCAGATGAGCCACATAGCATCCCACTTGTATAGCGTGGAGGTGTCCTACTTTGATTT
TCTCAACAGGGTTAGGATGGAGGAGATGAGCCTTAGGAACAGTGGGCTCTGGGAGGTGCA
CCATCCATGGTTGAACATGTTCGTGCCAAGCGCTGGGATTAGTGACTTCAGGGACCTGCT
CATGGACAGCATCTCACCGGATAACTTCGAGGGCCTCATCCTCATCTACCCACTCCTCAG
ACACAAGTGGGACACCAACACGTCGGTCGTGTTACCGGACTCCGGGTCGACGGACCAGGT
GATGTACGCGGTGGGCATCCTCCGGTCGGCGAACCCCGACGACGGGTGCTCCCACCACTG
CCTCCAGGAGCTCCTCCTCCGCCACCGCCGCCTCGCCGGCGCCGCCGCGTCGGGCCTCGG
CGCGAAGCAGTACCTCGCCCACCACCCGACCCCGGCCGGCTGGCGCCGCCACTTCGGCCG
GCGGTGGGAGCGGTTCGCCGATCGCAAGGCCCGGTTCGACCCGAGGTGCATCCTCGGGCC
AGGCCAGGGTATATTCCCCAGGGACAGCAGCAGCAGCAATGGCGCATTTGCAAGCTATAG
CTGACACGAGAAAGTGCAGTGTAGTGCTGTGCTGTGCCGTGCCGTGCCGTGCCGTGACAG
CTGGTGGTACAATAAGAGGGGGACATAGGATAGGCAGGCGAGGCTAGGAGGGAGATCTTG
TTCTTTCTTTTCGATAGCTTTCTTTTCTGCTTCGATTTGAGGCCGGCATCGTTTTGGTTG
GTTGATGTGGTTGGGCGGGGGTTGATTTTGAACGGATCCTCGGTGGTGGTGATCACCATC
ATCACTGGGAATTTTGGAACTTTGTACAGGCTGAGGAAGCAAGAACAGCTCTAGGGCGAA
AGGATAGTGATAGCGATTCTATTTCGA

CDS

1584 bp

>Os10t0483500-01 FAD linked oxidase, N-terminal domain containing protein.
ATGGAGGTTGCCATGGTCTGCACAAGAGTTAACCTGCTCATCCTCATCCTTTCTCTCTGC
TCCCCATACAAGTTTATACAGAGCCCCATGGACTTTGGCCCTTTGAACCTCCTTCCCACC
ACCACCACTGCATCCAGTGACTTTGGTAGAATCCTCTTCCACTCCCCATCTGCAGTTCTA
AAGCCCCAAGCTCCAAGGGATATATCCCTGCTTCTCAGCTTCCTCTCTGCCTCACCTCTT
GGCAAGGTGACGGTGGCAGCCAGGGGAGCAGGTCACTCCATCCATGGACAGGCACAGGCC
CTTGATGGCATTGTAGTGGAGATGAGCTCCTTGCCTTCTGAGATTGAATTCTACAGAAGA
GGAGAAGGAGATGTTTCTTATGCTGATGTGGGTGGTGGAATCATGTGGATTGAGCTTCTG
GAGCAGAGCTTGAAGCTTGGGCTGGCTCCAAGGTCTTGGACTGATTACCTCTATCTCACC
ATTGGTGGAACCTTGTCCAATGCTGGCATCAGTGGGCAGACATTCAAGCATGGACCTCAG
ATTAGCAATGTTCTACAGCTGGAAGTAGTCACAGGCAGGGGTGAGATTGTGACCTGTTCA
CCCACCAAGGATGCAGAGCTATTCAATGCTGTTCTTGGAGGCCTTGGGCAGTTCGGCATC
ATTACTAGGGCAAGGATCCTGCTGCAGGAAGCTCCACAGAAAGTGAAGTGGGTTAGAGCC
TTCTATGATGATTTCGCCACCTTCACCAAAGACCAGGAGTTGCTGGTGTCAATGCCGGTT
TTGGTGGACTATGTGGAAGGTTTCATCGTGTTGAATGAGCAATCCCTTCACAGCTCCTCC
ATTGCCTTCCCTACAAATGTTGACTTCAACCCAGATTTTGGCACCAAGAACAACCCTAAG
ATCTACTACTGCATAGAGTTTGCTGTCCACGATTACCAGAACAAGAACATCAATGTGGAA
CAGGTCGTGGAAGTCATCTCAAGGCAGATGAGCCACATAGCATCCCACTTGTATAGCGTG
GAGGTGTCCTACTTTGATTTTCTCAACAGGGTTAGGATGGAGGAGATGAGCCTTAGGAAC
AGTGGGCTCTGGGAGGTGCACCATCCATGGTTGAACATGTTCGTGCCAAGCGCTGGGATT
AGTGACTTCAGGGACCTGCTCATGGACAGCATCTCACCGGATAACTTCGAGGGCCTCATC
CTCATCTACCCACTCCTCAGACACAAGTGGGACACCAACACGTCGGTCGTGTTACCGGAC
TCCGGGTCGACGGACCAGGTGATGTACGCGGTGGGCATCCTCCGGTCGGCGAACCCCGAC
GACGGGTGCTCCCACCACTGCCTCCAGGAGCTCCTCCTCCGCCACCGCCGCCTCGCCGGC
GCCGCCGCGTCGGGCCTCGGCGCGAAGCAGTACCTCGCCCACCACCCGACCCCGGCCGGC
TGGCGCCGCCACTTCGGCCGGCGGTGGGAGCGGTTCGCCGATCGCAAGGCCCGGTTCGAC
CCGAGGTGCATCCTCGGGCCAGGCCAGGGTATATTCCCCAGGGACAGCAGCAGCAGCAAT
GGCGCATTTGCAAGCTATAGCTGA

Protein

527 aa

>Os10t0483500-01 FAD linked oxidase, N-terminal domain containing protein.
MEVAMVCTRVNLLILILSLCSPYKFIQSPMDFGPLNLLPTTTTASSDFGRILFHSPSAVL
KPQAPRDISLLLSFLSASPLGKVTVAARGAGHSIHGQAQALDGIVVEMSSLPSEIEFYRR
GEGDVSYADVGGGIMWIELLEQSLKLGLAPRSWTDYLYLTIGGTLSNAGISGQTFKHGPQ
ISNVLQLEVVTGRGEIVTCSPTKDAELFNAVLGGLGQFGIITRARILLQEAPQKVKWVRA
FYDDFATFTKDQELLVSMPVLVDYVEGFIVLNEQSLHSSSIAFPTNVDFNPDFGTKNNPK
IYYCIEFAVHDYQNKNINVEQVVEVISRQMSHIASHLYSVEVSYFDFLNRVRMEEMSLRN
SGLWEVHHPWLNMFVPSAGISDFRDLLMDSISPDNFEGLILIYPLLRHKWDTNTSVVLPD
SGSTDQVMYAVGILRSANPDDGCSHHCLQELLLRHRRLAGAAASGLGAKQYLAHHPTPAG
WRRHFGRRWERFADRKARFDPRCILGPGQGIFPRDSSSSNGAFASYS*

5'UTR

chr10:18270328..18270607 (+ strand) : 280 bp

CDS

chr10:18270608..18271181 (+ strand) : 574 bp

chr10:18271362..18271489 (+ strand) : 128 bp

chr10:18271615..18271875 (+ strand) : 261 bp

chr10:18271955..18272217 (+ strand) : 263 bp

chr10:18273843..18274200 (+ strand) : 358 bp

3'UTR

chr10:18274201..18274523 (+ strand) : 323 bp

FASTA

>Os10t0483500-01 class=Sequence position=chr10:18270328..18274523 (+ strand)
AAAACCTCAT AGCCTCATCA GCTGATCACT GAGTGCCTTC TCCTTCTCCT CCTCCTTTAA GAACCCTCTT CCCTGCCCAT
CCTTTTCTTC ATCCCCTCAA CTTTGCCTAA AAGGCAAGAA CAAAGCCATA TGATTCTCTG ATCCCTTCTT CCAAGCTGCA
TCCCAACACA ACACATTGTG GTGACACAGC AAACATAATA TACACACATC CTCTTCTTCT TCTACCACCC TCCATATTCC
TGCAAGAAAC AACTGGAGGA AGAATCACTA CTCCAACACC ATGGAGGTTG CCATGGTCTG CACAAGAGTT AACCTGCTCA
TCCTCATCCT TTCTCTCTGC TCCCCATACA AGTTTATACA GAGCCCCATG GACTTTGGCC CTTTGAACCT CCTTCCCACC
ACCACCACTG CATCCAGTGA CTTTGGTAGA ATCCTCTTCC ACTCCCCATC TGCAGTTCTA AAGCCCCAAG CTCCAAGGGA
TATATCCCTG CTTCTCAGCT TCCTCTCTGC CTCACCTCTT GGCAAGGTGA CGGTGGCAGC CAGGGGAGCA GGTCACTCCA
TCCATGGACA GGCACAGGCC CTTGATGGCA TTGTAGTGGA GATGAGCTCC TTGCCTTCTG AGATTGAATT CTACAGAAGA
GGAGAAGGAG ATGTTTCTTA TGCTGATGTG GGTGGTGGAA TCATGTGGAT TGAGCTTCTG GAGCAGAGCT TGAAGCTTGG
GCTGGCTCCA AGGTCTTGGA CTGATTACCT CTATCTCACC ATTGGTGGAA CCTTGTCCAA TGCTGGCATC AGTGGGCAGA
CATTCAAGCA TGGACCTCAG ATTAGCAATG TTCTACAGCT GGAAGTAGTC ACAGGTGAGA GATGCATAAT GAAACATTAA
AAAATATTGA TAAGGTCTTA TATTTGCCCC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTT
TCTCTCAACG TCTTTCTTGC CCAACGTCTT TTAACTGATG GGCAGTAGAT TTTCTGTTCC TCTTTGCTTG ACAGGCAGGG
GTGAGATTGT GACCTGTTCA CCCACCAAGG ATGCAGAGCT ATTCAATGCT GTTCTTGGAG GCCTTGGGCA GTTCGGCATC
ATTACTAGGG CAAGGATCCT GCTGCAGGAA GCTCCACAGA AAGTATGCAG CTTTAGAACT GTCCTTTGCA TATTAGTATA
TTATTATATG ATCTTAACCA TTATTTCTGC ATGTCATGTT TCTGACACGC ATATATATAA TTAAACAAAT CTGGAATTTC
ATTTTAGGTG AAGTGGGTTA GAGCCTTCTA TGATGATTTC GCCACCTTCA CCAAAGACCA GGAGTTGCTG GTGTCAATGC
CGGTTTTGGT GGACTATGTG GAAGGTTTCA TCGTGTTGAA TGAGCAATCC CTTCACAGCT CCTCCATTGC CTTCCCTACA
AATGTTGACT TCAACCCAGA TTTTGGCACC AAGAACAACC CTAAGATCTA CTACTGCATA GAGTTTGCTG TCCACGATTA
CCAGAACAAG AACATCAATG TGGAACAGGT AAGCTCCAAA ATTTACTCTG CTTTTTGTGA ACTTATCAAG TCATGGTAAT
GATCAAACAA GTCTTCATCT ATTTCAGGTC GTGGAAGTCA TCTCAAGGCA GATGAGCCAC ATAGCATCCC ACTTGTATAG
CGTGGAGGTG TCCTACTTTG ATTTTCTCAA CAGGGTTAGG ATGGAGGAGA TGAGCCTTAG GAACAGTGGG CTCTGGGAGG
TGCACCATCC ATGGTTGAAC ATGTTCGTGC CAAGCGCTGG GATTAGTGAC TTCAGGGACC TGCTCATGGA CAGCATCTCA
CCGGATAACT TCGAGGGCCT CATCCTCATC TACCCACTCC TCAGACACAA GTAAGCAGTA CTGCCCACTA ATGCTAAATA
GGCTTCACAT TATGATATGC CAACATGAGG GCACAGCAAT GCGTGGAAGC ATTATTTGTG AGAAAAAGGT TATCTATTGG
TTATTTAATT GATCTCTCTT TCATGATCAG CAACATTAGC TGCCAAGCAG TCCTAGTAGG ACAAGTACTT GTCTGCATTA
TCCAACGTGG TGCCCCTTTG TGTTATAGTA TTAGTCCCTT TTGGCATTAA TATGTTGGTC CATTTTTTTT CAATTTTACA
ACTGCCCAGT GTAGAAGATA TTTACATGCC TGATTAGGTT AATATTTCAG TGTGGGGCGT CTTTTTGCTC TTCTTTGGAA
ACATATGTTG CTCTTTTCAT AGCATTTATG ATTTGAGTGT GTTCTCATCG ATTCTGTAAA TGTTAATGTC ATCTATTTAT
GATTTGGTAG CATCCAGCTA TTTATGATAT CAGGAAGAGA GCCTTTCTTT TTAATAAATG ATGTTTGATT TATCCTTCTG
CCTAGTCCCA CTTAGGTTCT AAAGCCCTAG TATCATTACT TCATCAGTAT TCTCTTGTTG GTCCCGCTTA GGTCTGTTCT
TGTGGTAAGA AGTAAAGCTT CTGCTTTTCA CATATTAAGA GGGCTGGGGC CTGAGGGGGA TCCATTCTTG CCTAGGCTTT
CAGCGCGGCA GATAAGTTTC AGGCTTGCTT CATCCAAACG TTGGACACAA GAATGGGAAT ATGCGATAAG TTAGGCAGTT
AGTTTGTCTA ATGCTGTGGC AGCTTATTTT TGTTGGAAAG TTACATGTTT GCATAAAATA ATTTTTTGGT CGAAAGTCCA
CACCTACATG GCTACAGCGA CTTTATTTGT AGACTGTTGC TTGATTACGA ATTGTATCAT GTTTTATGGG TCCCTCAAAA
TAGAATGCCA GTTATCATCA GCATATTATG ATTCAACTGA AGCAATAGCT TAATCAGTGG CATCCTACTT TTCAGAGTAG
TTTGGTCACC TTTGTTCAGT AGCAACAGTG AATATAGAAA CAGAAGTTGC TTGATCTCTC TTACATTTTA GTTTTTTGAC
TTCAATGAAA AGCATACCGA TACTTTGGCT TGTTTGTGCT TAGATAAATA TGCTTATTCC AGCCCATGAT AAATAATTAT
CTAGGTCAAA TGGAACTAAT GTTGACTATC GGCAAACTAT TTGTTGTGAT GTTGACAAGG CACAAATTCT GTGCGGTGTT
AAAAATCAAA CAAGTTTTAT GATCTCATTG ACCTCAGATG AAAGAATTTG TAATGTGATC CTCCTTCCAA GAAGTTTATA
CAAGTTTATC TGCAAGGGGG GTTTAAAACT ACTCTTGGTG GCAGGCAGAG TCAGCTCTAA TCTTGTTGAA CCAATGAACC
TTAACAAAAG ATTCATGTTC ACTGTACTGA AATAATTTAA CAGCACCAAT GTGGACTTCA CTCCCCCAAA CACTAAAACA
AACCTCTCTT GAGTCAGAAT ACACTGAACT AGTACTGAAT GTCAGCTATA TTATCTTGTA CTGCTCATTT TTTTTTCATT
TCTAATAATT CTGATACTCT GTTAGATGCT GGGATATCAT CTAATTGTTG CACTATTTAT GCCTCTCACT GACAGGTGGG
ACACCAACAC GTCGGTCGTG TTACCGGACT CCGGGTCGAC GGACCAGGTG ATGTACGCGG TGGGCATCCT CCGGTCGGCG
AACCCCGACG ACGGGTGCTC CCACCACTGC CTCCAGGAGC TCCTCCTCCG CCACCGCCGC CTCGCCGGCG CCGCCGCGTC
GGGCCTCGGC GCGAAGCAGT ACCTCGCCCA CCACCCGACC CCGGCCGGCT GGCGCCGCCA CTTCGGCCGG CGGTGGGAGC
GGTTCGCCGA TCGCAAGGCC CGGTTCGACC CGAGGTGCAT CCTCGGGCCA GGCCAGGGTA TATTCCCCAG GGACAGCAGC
AGCAGCAATG GCGCATTTGC AAGCTATAGC TGACACGAGA AAGTGCAGTG TAGTGCTGTG CTGTGCCGTG CCGTGCCGTG
CCGTGACAGC TGGTGGTACA ATAAGAGGGG GACATAGGAT AGGCAGGCGA GGCTAGGAGG GAGATCTTGT TCTTTCTTTT
CGATAGCTTT CTTTTCTGCT TCGATTTGAG GCCGGCATCG TTTTGGTTGG TTGATGTGGT TGGGCGGGGG TTGATTTTGA
ACGGATCCTC GGTGGTGGTG ATCACCATCA TCACTGGGAA TTTTGGAACT TTGTACAGGC TGAGGAAGCA AGAACAGCTC
TAGGGCGAAA GGATAGTGAT AGCGATTCTA TTTCGA

Locus: Os10g0483500

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Locus: Os10g0483500

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