Os10t0505700-01

Locus

Os10g0505700

Description

Similar to Nonspecific lipid-transfer protein 2 (nsLTP2) (7 kDa lipid transfer protein).

RAP-DB Gene Symbol Synonym(s)

RAP-DB Gene Name Synonym(s)

CGSNL Gene Symbol

CGSNL Gene Name

Oryzabase Gene Symbol Synonym(s)

OsLTP2.12, OsLtpII.12

Oryzabase Gene Name Synonym(s)

non-specific lipid transfer protein 2.12, lipid transfer protein 2.12, type 2 non-specific lipid transfer protein 12

Transcript Evidence

AK063196 (DDBJ, Best hit)

Protein Evidence

NP_001148419.1 (RefSeq)

Literature

Note

Manual Curation

Gene Ontology (GO)

Biological Process: lipid transport (GO:0006869)

Functional domain (InterPro)

Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (IPR003612)

Plant lipid transfer protein/hydrophobic protein, helical domain (IPR013770)

Bifunctional inhibitor/plant lipid transfer protein/seed storage (IPR016140)

Full-length cDNA

001-112-C03 (Online Clone Ordering)

Expression Databases

TENOR (Os10t0505700-01)

RiceXPro (AK063196)

Others

Oryzabase (13540)

KEGG (Os10t0505700-01)

Transcript

503 bp

>Os10t0505700-01 Similar to Nonspecific lipid-transfer protein 2 (nsLTP2) (7 kDa lipid transfer protein).
AGCAGCCAGCAGCCAACTGCATCGATATCGATCGATCACTCGACCGACCATCTCACAAGC
AAAGCAAAAGCTCGTGGCAACAATGGCGAAGTGGGCGGCGATCATGGCGGTGCTGCTGCT
GGCGGCGGCGTGGGCGCCGGCGCCGGCGACGGCGCAGTGCAACGCCGGGCAGCTGGCGAT
CTGCGCGGGCGCGATCATCGGCGGGTCGACGCCGTCGGCGTCGTGCTGCTCCAACCTGCG
CGCGCAGAGGGGGTGCTTCTGCCAGTACGCGCGCAACCCGGCGTACGCCTCCTACATCAA
CAGCGCCAACGCCCGCAAGACCCTCACCTCCTGCGGCATCGCCATCCCCCGCTGCTAGGC
ACGCTCGATCTCCCGCCGCCGCGCGCCGCCGCTCGCCGGCGCCGGCGCCGGCCATGGTGC
GTGGCAAATATATATATATATATATATATATACTGTGTGTACGTGCGCTTGAATAAAGGA
CGTGAGTTAATTTGATCGGTGTC

CDS

276 bp

>Os10t0505700-01 Similar to Nonspecific lipid-transfer protein 2 (nsLTP2) (7 kDa lipid transfer protein).
ATGGCGAAGTGGGCGGCGATCATGGCGGTGCTGCTGCTGGCGGCGGCGTGGGCGCCGGCG
CCGGCGACGGCGCAGTGCAACGCCGGGCAGCTGGCGATCTGCGCGGGCGCGATCATCGGC
GGGTCGACGCCGTCGGCGTCGTGCTGCTCCAACCTGCGCGCGCAGAGGGGGTGCTTCTGC
CAGTACGCGCGCAACCCGGCGTACGCCTCCTACATCAACAGCGCCAACGCCCGCAAGACC
CTCACCTCCTGCGGCATCGCCATCCCCCGCTGCTAG

Protein

92 aa

>Os10t0505700-01 Similar to Nonspecific lipid-transfer protein 2 (nsLTP2) (7 kDa lipid transfer protein).
MAKWAAIMAVLLLAAAWAPAPATAQCNAGQLAICAGAIIGGSTPSASCCSNLRAQRGCFC
QYARNPAYASYINSANARKTLTSCGIAIPRC*

5'UTR

chr10:19335534..19335615 (- strand) : 82 bp

CDS

chr10:19335258..19335533 (- strand) : 276 bp

3'UTR

chr10:19335164..19335257 (- strand) : 94 bp

chr10:19335093..19335143 (- strand) : 51 bp

FASTA

>Os10t0505700-01 class=Sequence position=chr10:19335093..19335615 (- strand)
AGCAGCCAGC AGCCAACTGC ATCGATATCG ATCGATCACT CGACCGACCA TCTCACAAGC AAAGCAAAAG CTCGTGGCAA
CAATGGCGAA GTGGGCGGCG ATCATGGCGG TGCTGCTGCT GGCGGCGGCG TGGGCGCCGG CGCCGGCGAC GGCGCAGTGC
AACGCCGGGC AGCTGGCGAT CTGCGCGGGC GCGATCATCG GCGGGTCGAC GCCGTCGGCG TCGTGCTGCT CCAACCTGCG
CGCGCAGAGG GGGTGCTTCT GCCAGTACGC GCGCAACCCG GCGTACGCCT CCTACATCAA CAGCGCCAAC GCCCGCAAGA
CCCTCACCTC CTGCGGCATC GCCATCCCCC GCTGCTAGGC ACGCTCGATC TCCCGCCGCC GCGCGCCGCC GCTCGCCGGC
GCCGGCGCCG GCCATGGTGC GTGGCAAATA TATATATATA TATATATATA TATATATATA TATATATATA TACTGTGTGT
ACGTGCGCTT GAATAAAGGA CGTGAGTTAA TTTGATCGGT GTC

Locus: Os10g0505700

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Locus: Os10g0505700

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