Locus

Os10g0527601

Description

Glutathione S-transferase, C-terminal-like domain containing protein.

RAP-DB Gene Symbol Synonym(s)

RAP-DB Gene Name Synonym(s)

CGSNL Gene Symbol

GSTU20

CGSNL Gene Name

TAU GLUTATHIONE S-TRANSFERASE 20

Oryzabase Gene Symbol Synonym(s)

OsGSTU20

Oryzabase Gene Name Synonym(s)

Transcript Evidence

ab initio prediction

Protein Evidence

Q6WSC2 (UniProt)

Literature

Note

• Exon-intron structures and exon sequences are different between Build 5 and IRGSP-1.0.

Manual Curation

Gene Ontology (GO)

Molecular Function: protein binding (GO:0005515)

Functional domain (InterPro)

Glutathione S-transferase, N-terminal (IPR004045)

Glutathione S-transferase, C-terminal (IPR004046)

Glutathione S-transferase, C-terminal-like (IPR010987)

Thioredoxin-like fold (IPR012336)

Glutathione S-transferase/chloride channel, C-terminal (IPR017933)

Expression Databases

TENOR (Os10t0527601-00)

Others

Oryzabase (9537)

Transcript

774 bp

>Os10t0527601-00 Glutathione S-transferase, C-terminal-like domain containing protein.
ATGGCCGGAGGAGGAGATGacctgaagatgctcggcgtctacgtgagcccattcccactg
cgagtgaagctcgcgctcagcttcaagggcctgagcttcgagtacgtcgaggaggacctc
cacaacaagagcgatctcctcgtcagctccaacccggtgcacaagaggacccccgtggtc
atccacaacggcaagcccatctccgagtccatggtcatcgtgcagtacctcgacgaggcg
ttccccggcgccggcgccgccctcctcccctccgaccccctcgaccgcgccgtcgctcgc
ttctgggcctcctacgtcgacgacaaggtaattcgtatgatcaccgtacatcagttctct
cacgcaagcttttctgacgattttggtgctgatcgaatgatgcagctgttcagtgcgtgg
aagatggtgttcaagggaaagacggaggaggagaaggtggaggggaggaagcagacgttc
gcggtggcggagacgctggagggagccctgagggagtgctccaaggggaagcccttcttt
ggcggcgacgccgtcgggtacgtcgacgtcgcGCTCGGTGGCTTCGTCCCGTGGGTGCAT
GCGATGGAGGAGCTGTTCGGGTTGAAGCAGTTCGACGCCGCCAAGACACCGCTCCTGGCG
GCGTGGCTGGAGCGCGTCGGCGAGCTCGAGGCCTACAAGGCGGTCATGCCGGACGCCGGC
ATGATGATAGAGTTCAAGAAGAAGCAGGCACAAGAAGCCGCCGCAGAGGCCTGA

CDS

774 bp

>Os10t0527601-00 Glutathione S-transferase, C-terminal-like domain containing protein.
ATGGCCGGAGGAGGAGATGacctgaagatgctcggcgtctacgtgagcccattcccactg
cgagtgaagctcgcgctcagcttcaagggcctgagcttcgagtacgtcgaggaggacctc
cacaacaagagcgatctcctcgtcagctccaacccggtgcacaagaggacccccgtggtc
atccacaacggcaagcccatctccgagtccatggtcatcgtgcagtacctcgacgaggcg
ttccccggcgccggcgccgccctcctcccctccgaccccctcgaccgcgccgtcgctcgc
ttctgggcctcctacgtcgacgacaaggtaattcgtatgatcaccgtacatcagttctct
cacgcaagcttttctgacgattttggtgctgatcgaatgatgcagctgttcagtgcgtgg
aagatggtgttcaagggaaagacggaggaggagaaggtggaggggaggaagcagacgttc
gcggtggcggagacgctggagggagccctgagggagtgctccaaggggaagcccttcttt
ggcggcgacgccgtcgggtacgtcgacgtcgcGCTCGGTGGCTTCGTCCCGTGGGTGCAT
GCGATGGAGGAGCTGTTCGGGTTGAAGCAGTTCGACGCCGCCAAGACACCGCTCCTGGCG
GCGTGGCTGGAGCGCGTCGGCGAGCTCGAGGCCTACAAGGCGGTCATGCCGGACGCCGGC
ATGATGATAGAGTTCAAGAAGAAGCAGGCACAAGAAGCCGCCGCAGAGGCCTGA

Protein

257 aa

>Os10t0527601-00 Glutathione S-transferase, C-terminal-like domain containing protein.
MAGGGDDLKMLGVYVSPFPLRVKLALSFKGLSFEYVEEDLHNKSDLLVSSNPVHKRTPVV
IHNGKPISESMVIVQYLDEAFPGAGAALLPSDPLDRAVARFWASYVDDKVIRMITVHQFS
HASFSDDFGADRMMQLFSAWKMVFKGKTEEEKVEGRKQTFAVAETLEGALRECSKGKPFF
GGDAVGYVDVALGGFVPWVHAMEELFGLKQFDAAKTPLLAAWLERVGELEAYKAVMPDAG
MMIEFKKKQAQEAAAEA*

CDS

chr10:20493427..20494200 (+ strand) : 774 bp

FASTA

>Os10t0527601-00 class=Sequence position=chr10:20493427..20494200 (+ strand)
ATGGCCGGAG GAGGAGATGa cctgaagatg ctcggcgtct acgtgagccc attcccactg cgagtgaagc tcgcgctcag
cttcaagggc ctgagcttcg agtacgtcga ggaggacctc cacaacaaga gcgatctcct cgtcagctcc aacccggtgc
acaagaggac ccccgtggtc atccacaacg gcaagcccat ctccgagtcc atggtcatcg tgcagtacct cgacgaggcg
ttccccggcg ccggcgccgc cctcctcccc tccgaccccc tcgaccgcgc cgtcgctcgc ttctgggcct cctacgtcga
cgacaaggta attcgtatga tcaccgtaca tcagttctct cacgcaagct tttctgacga ttttggtgct gatcgaatga
tgcagctgtt cagtgcgtgg aagatggtgt tcaagggaaa gacggaggag gagaaggtgg aggggaggaa gcagacgttc
gcggtggcgg agacgctgga gggagccctg agggagtgct ccaaggggaa gcccttcttt ggcggcgacg ccgtcgggta
cgtcgacgtc gcGCTCGGTG GCTTCGTCCC GTGGGTGCAT GCGATGGAGG AGCTGTTCGG GTTGAAGCAG TTCGACGCCG
CCAAGACACC GCTCCTGGCG GCGTGGCTGG AGCGCGTCGG CGAGCTCGAG GCCTACAAGG CGGTCATGCC GGACGCCGGC
ATGATGATAG AGTTCAAGAA GAAGCAGGCA CAAGAAGCCG CCGCAGAGGC CTGA

Locus: Os10g0527601

Loading... No data Feature: Raw Normalized or Cy5/Cy3 Ratio
RXP_0001: Spatio-temporal gene expression of various tissues/organs throughout entire growth in the field RXP_0002: Diurnal and circadian gene expression profile of leaf throughout entire growth RXP_0003: Leaf gene expression profile throughout entire growth in the field (12:00) RXP_0004: Leaf gene expression profile throughout entire growth in the field (00:00) RXP_0005: Leaf gene expression profile during sunrise RXP_0006: Leaf gene expression profile during sunset RXP_0007: Root gene expression profile throughout entire growth in the field (12:00) RXP_0008: Root gene expression profile throughout entire growth in the field (00:00) RXP_0009: Diurnal and circadian gene expression profile of root RXP_0010: Gene expression profile during reproductive organ development RXP_0011: Grain gene expression profile at early developmental stage RXP_0012: Embryo and Endosperm gene expression profile at ripening stage RXP_1001: Root gene expression profile in response to abscisic acid RXP_1006: Shoot gene expression profile in response to abscisic acid RXP_1002: Root gene expression profile in response to gibberellin RXP_1007: Shoot gene expression profile in response to gibberellin RXP_1003: Root gene expression profile in response to auxin RXP_1008: Shoot gene expression profile in response to auxin RXP_1004: Root gene expression profile in response to brassinosteroid RXP_1009: Shoot gene expression profile in response to brassinosteroid RXP_1005: Root gene expression profile in response to cytokinin RXP_1010: Shoot gene expression profile in response to cytokinin RXP_1011: Root gene expression profile in response to jasmonic acid RXP_1012: Shoot gene expression profile in response to jasmonic acid

Link to RiceXPro

Graph view ()

Locus: Os10g0527601

Loading... No data Hierarchy: 1 2 3 4    MR or MR rank: 1 2 3 4 5 10 15 1 2 3 4

Link to RiceFREND

MR list ()

HyperTree ()