Locus
Os11g0171500
Description
Calcium-dependent protein kinase
RAP-DB Gene Symbol Synonym(s)
CDPK24, OsCDPK14, OsCPK24
RAP-DB Gene Name Synonym(s)
CALCIUM-DEPENDENT PROTEIN KINASE 24, calcium-dependent protein kinase 14
CGSNL Gene Symbol
CDPK24
CGSNL Gene Name
CALCIUM-DEPENDENT PROTEIN KINASE 24
Oryzabase Gene Symbol Synonym(s)
OsCDPK24, OsCPK24, OsCDPK14
Oryzabase Gene Name Synonym(s)
calcium-dependent protein kinase, calcium-dependent protein kinase 14
Transcript Evidence
Protein Evidence
Literature
PMID: 27627618
PMID: 16255173
PMID: 15695435
Note
Manual Curation
April 28, 2017
Gene Ontology (GO)
Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: calcium ion binding (GO:0005509)
Molecular Function: ATP binding (GO:0005524)
Functional domain (InterPro)
Protein kinase-like domain (IPR011009)
Protein kinase domain (IPR000719)
EF-hand domain pair (IPR011992)
EF-hand domain (IPR002048)
Protein kinase, ATP binding site (IPR017441)
Serine/threonine-protein kinase, active site (IPR008271)
EF-Hand 1, calcium-binding site (IPR018247)
Experimentally confirmed subcellular location
nucleus (GO:0005634)
cytoplasm (GO:0005737)
Full-length cDNA
J033090B04 (Online Clone Ordering)
Expression Databases
TENOR (Os11t0171500-01)
RiceXPro (AK102308)
Others
Oryzabase (8075)
Transcript |
2523 bp |
>Os11t0171500-01 Calcium-dependent protein kinase ATAGATACGACCTGGCTGCCCTCACAAAAATACTTCACCAAACCACCCTCCTCCTCCTCC CCCTTTACCATTTCCAAGTTCCAACCCCCAAAAAAAATCCAACCAAAAAGCGGAGATTTT CCAACTCTTATCATCTCCTCCTCCTCCTCCTCGTCATCGTCATCACCAGCACACACCCGA GAGAAAAAAATCCTATAAAGAAATGGATTGAGCCATCACCCAACGCCGCCAAGATCCTGT CCTCTTGTGTGCGCAACCTGTAGCTCCACCTCCACGCAGGATCAACACCCAAATCCCCCC ATCTTCTTTTCTTTTTCGTTTCGTTTCTGCAAGATTTGCATCTTCTTCTTCTTCCTCCGA GGAGTGAGTGACACCTGAGATAGCGAGAGCGAGATTTTCTTCGGTTTTTTTGTTCCTCTT TTTGGCCATAAACCTCCCATAAAGCTCGGTTTCTTGGTTCGTTTTTTCTTTCTTTCTTCC TCTCCTTCGAGAATCGCCCGAGTGTGAAATCCAAGATCCCGAATTCCGTGTCTTCTTCTT CTTCCGTAGAAATCCCGGGGTGGGCAAAGCGGTGGGATTTCTGGAGAGGGGGAGAGCGCT ACAAGGCAAGAAGCTTGGGTGTCCGTAGTCCGTACGGTTCTTGATCTGGGGTCGCCGCCA ATGCAGCCGGACCCGAGCGGGAGCGGCGGCGACGGCAACGCCAATGCGAAGGCGAAGCTG GCGCCGCCGCCGGTGACGGCGGCGGGAGGTCGGCCGGTGTCGGTGCTGCCGCACAAGACG GCGAACGTGCGCGACCACTACCGCATCGGGAAGAAGCTCGGGCAGGGGCAGTTCGGGACG ACGTACCTGTGCGTGGACAAGGCGAGCGGCGGCGAGTTCGCGTGCAAGTCCATCCCCAAG CGGAAGCTGCTGTGCCGGGAGGACTACGAGGACGTGTGGCGCGAGATCCAGATCATGCAC CACCTCTCCGAGCACCCCAACGTCGTCCGCATCCGCGGCGCCTACGAGGACGCGCTGTTC GTCCACATCGTCATGGAGCTCTGCGCCGGCGGCGAGCTCTTCGACCGCATCGTCGCCAAG GGCCACTACACCGAGCGCGCCGCCGCGCAGCTCATCCGCACCATCGTCGCCGTCGTCGAG GGATGCCACTCGCTCGGCGTCATGCACCGGGACCTCAAGCCCGAGAACTTCCTCTTCGCC AGCGCCGCCGAGGACGCCCCCCTCAAGGCCACTGATTTCGGCCTCTCCATGTTCTACAAG CCTGGTGATAAGTTCTCTGATGTTGTTGGGAGCCCCTATTATGTTGCACCTGAGGTACTT CAGAAATGCTATGGTCCAGAATCTGATGTCTGGAGTGCTGGGGTAATTCTTTACATTTTG CTATGTGGTGTTCCACCATTTTGGGCAGAAACTGAAGCTGGAATTTTCAGGCAGATTCTA CGAGGCAAACTTGATTTTGAATCTGAACCCTGGCCTAGCATCTCTGACAGTGCTAAAGAT CTAGTCCGTAATATGCTTTGCCGGGATCCTACAAAGAGACTTACAGCCCATGAGGTTCTC TGTCATCCATGGATTGTTGATGATGCTGTGGCACCTGACAAGCCTATTGATTCTGCTGTT TTGTCAAGACTGAAGCACTTTTCGGCAATGAACAAGCTCAAGAAGATGGCATTGAGGGTT ATTGCTGAAAGCCTGTCTGAGGAAGAGATTGGAGGACTAAAGGAGCTATTCAAAATGATT GATACTGACGATAGTGGAACTATAACTTTTGATGAGCTGAAAGAGGGCTTGAAAAGGGTG GGTTCAGAATTAACAGAACATGAAATCCAGGCTTTAATGGAAGCGGCTGATATCGACAAC AGTGGAACCATCGACTATGGTGAATTCATTGCTGCTACTCTCCACATGAATAAGCTAGAG AGGGAGGAAAACTTAGTATCAGCATTCTCATTTTTCGACAAAGATGGAAGTGGTTTCATA ACTATTGATGAGCTGTCACAAGCATGCCGCGAATTTGGCCTTGATGATCTTCACCTTGAG GATATGATTAAAGATGTTGATCAAAACAATGACGGACAAATTGACTACAGCGAGTTCACG GCGATGATGAGAAAGGGCAATGCTGGTGGAGCTGGAAGGAGAACCATGAGGAACAGCTTG CAGTTGAATCTTGGTGAGATCTTGAACCCCAGCAACAGCTAAACTCCTACAGGAAGGCCA TGGCTGTTACATGCCATCATTGTCTGAATCTCTGCACGCCTCATCAGCTGGACTAATCTC TAAGAGGGCAAAGCCGTTGAGTGAATTGTGCTTTGGCGTTACATGAGACGCTGAAGAATT TTCGTAGCAGTAATAGCTACAGCTACTAGAGTGTAAGAGAAATTGGCGTTATGTGATCGT AATATCCTATCAGTGTAACTGATCTTAGATGATGCTGGAGATGATAGTACAATGAACAGC TTATATGTATTCCTGTCCTTGTAGACTGAACATTGTTGATAGTTGGGGAATGCTCTTGGC ATC
CDS |
1542 bp |
>Os11t0171500-01 Calcium-dependent protein kinase ATGCAGCCGGACCCGAGCGGGAGCGGCGGCGACGGCAACGCCAATGCGAAGGCGAAGCTG GCGCCGCCGCCGGTGACGGCGGCGGGAGGTCGGCCGGTGTCGGTGCTGCCGCACAAGACG GCGAACGTGCGCGACCACTACCGCATCGGGAAGAAGCTCGGGCAGGGGCAGTTCGGGACG ACGTACCTGTGCGTGGACAAGGCGAGCGGCGGCGAGTTCGCGTGCAAGTCCATCCCCAAG CGGAAGCTGCTGTGCCGGGAGGACTACGAGGACGTGTGGCGCGAGATCCAGATCATGCAC CACCTCTCCGAGCACCCCAACGTCGTCCGCATCCGCGGCGCCTACGAGGACGCGCTGTTC GTCCACATCGTCATGGAGCTCTGCGCCGGCGGCGAGCTCTTCGACCGCATCGTCGCCAAG GGCCACTACACCGAGCGCGCCGCCGCGCAGCTCATCCGCACCATCGTCGCCGTCGTCGAG GGATGCCACTCGCTCGGCGTCATGCACCGGGACCTCAAGCCCGAGAACTTCCTCTTCGCC AGCGCCGCCGAGGACGCCCCCCTCAAGGCCACTGATTTCGGCCTCTCCATGTTCTACAAG CCTGGTGATAAGTTCTCTGATGTTGTTGGGAGCCCCTATTATGTTGCACCTGAGGTACTT CAGAAATGCTATGGTCCAGAATCTGATGTCTGGAGTGCTGGGGTAATTCTTTACATTTTG CTATGTGGTGTTCCACCATTTTGGGCAGAAACTGAAGCTGGAATTTTCAGGCAGATTCTA CGAGGCAAACTTGATTTTGAATCTGAACCCTGGCCTAGCATCTCTGACAGTGCTAAAGAT CTAGTCCGTAATATGCTTTGCCGGGATCCTACAAAGAGACTTACAGCCCATGAGGTTCTC TGTCATCCATGGATTGTTGATGATGCTGTGGCACCTGACAAGCCTATTGATTCTGCTGTT TTGTCAAGACTGAAGCACTTTTCGGCAATGAACAAGCTCAAGAAGATGGCATTGAGGGTT ATTGCTGAAAGCCTGTCTGAGGAAGAGATTGGAGGACTAAAGGAGCTATTCAAAATGATT GATACTGACGATAGTGGAACTATAACTTTTGATGAGCTGAAAGAGGGCTTGAAAAGGGTG GGTTCAGAATTAACAGAACATGAAATCCAGGCTTTAATGGAAGCGGCTGATATCGACAAC AGTGGAACCATCGACTATGGTGAATTCATTGCTGCTACTCTCCACATGAATAAGCTAGAG AGGGAGGAAAACTTAGTATCAGCATTCTCATTTTTCGACAAAGATGGAAGTGGTTTCATA ACTATTGATGAGCTGTCACAAGCATGCCGCGAATTTGGCCTTGATGATCTTCACCTTGAG GATATGATTAAAGATGTTGATCAAAACAATGACGGACAAATTGACTACAGCGAGTTCACG GCGATGATGAGAAAGGGCAATGCTGGTGGAGCTGGAAGGAGAACCATGAGGAACAGCTTG CAGTTGAATCTTGGTGAGATCTTGAACCCCAGCAACAGCTAA
Protein |
513 aa |
>Os11t0171500-01 Calcium-dependent protein kinase MQPDPSGSGGDGNANAKAKLAPPPVTAAGGRPVSVLPHKTANVRDHYRIGKKLGQGQFGT TYLCVDKASGGEFACKSIPKRKLLCREDYEDVWREIQIMHHLSEHPNVVRIRGAYEDALF VHIVMELCAGGELFDRIVAKGHYTERAAAQLIRTIVAVVEGCHSLGVMHRDLKPENFLFA SAAEDAPLKATDFGLSMFYKPGDKFSDVVGSPYYVAPEVLQKCYGPESDVWSAGVILYIL LCGVPPFWAETEAGIFRQILRGKLDFESEPWPSISDSAKDLVRNMLCRDPTKRLTAHEVL CHPWIVDDAVAPDKPIDSAVLSRLKHFSAMNKLKKMALRVIAESLSEEEIGGLKELFKMI DTDDSGTITFDELKEGLKRVGSELTEHEIQALMEAADIDNSGTIDYGEFIAATLHMNKLE REENLVSAFSFFDKDGSGFITIDELSQACREFGLDDLHLEDMIKDVDQNNDGQIDYSEFT AMMRKGNAGGAGRRTMRNSLQLNLGEILNPSNS*
5'UTR
chr11:3499345..3499934 (- strand) : 590 bp
chr11:3499185..3499254 (- strand) : 70 bp
CDS
chr11:3498581..3499184 (- strand) : 604 bp
chr11:3497480..3497623 (- strand) : 144 bp
chr11:3497241..3497393 (- strand) : 153 bp
chr11:3497015..3497130 (- strand) : 116 bp
chr11:3496290..3496457 (- strand) : 168 bp
chr11:3495816..3496040 (- strand) : 225 bp
chr11:3495598..3495729 (- strand) : 132 bp
3'UTR
chr11:3495277..3495597 (- strand) : 321 bp
FASTA
>Os11t0171500-01 class=Sequence position=chr11:3495277..3499934 (- strand) ATAGATACGA CCTGGCTGCC CTCACAAAAA TACTTCACCA AACCACCCTC CTCCTCCTCC CCCTTTACCA TTTCCAAGTT CCAACCCCCA AAAAAAATCC AACCAAAAAG CGGAGATTTT CCAACTCTTA TCATCTCCTC CTCCTCCTCC TCGTCATCGT CATCACCAGC ACACACCCGA GAGAAAAAAA TCCTATAAAG AAATGGATTG AGCCATCACC CAACGCCGCC AAGATCCTGT CCTCTTGTGT GCGCAACCTG TAGCTCCACC TCCACGCAGG ATCAACACCC AAATCCCCCC ATCTTCTTTT CTTTTTCGTT TCGTTTCTGC AAGATTTGCA TCTTCTTCTT CTTCCTCCGA GGAGTGAGTG ACACCTGAGA TAGCGAGAGC GAGATTTTCT TCGGTTTTTT TGTTCCTCTT TTTGGCCATA AACCTCCCAT AAAGCTCGGT TTCTTGGTTC GTTTTTTCTT TCTTTCTTCC TCTCCTTCGA GAATCGCCCG AGTGTGAAAT CCAAGATCCC GAATTCCGTG TCTTCTTCTT CTTCCGTAGA AATCCCGGGG TGGGCAAAGC GGTGGGATTT CTGGAGAGGG GTAAATGAGC TTCCGTTTCT CGATTGGTTC TTGATCGCGT CTCCTCTCTC TCTCGAATTC ATTAGCTTCT CTTCGATTCT TTGATTTCAG GGAGAGCGCT ACAAGGCAAG AAGCTTGGGT GTCCGTAGTC CGTACGGTTC TTGATCTGGG GTCGCCGCCA ATGCAGCCGG ACCCGAGCGG GAGCGGCGGC GACGGCAACG CCAATGCGAA GGCGAAGCTG GCGCCGCCGC CGGTGACGGC GGCGGGAGGT CGGCCGGTGT CGGTGCTGCC GCACAAGACG GCGAACGTGC GCGACCACTA CCGCATCGGG AAGAAGCTCG GGCAGGGGCA GTTCGGGACG ACGTACCTGT GCGTGGACAA GGCGAGCGGC GGCGAGTTCG CGTGCAAGTC CATCCCCAAG CGGAAGCTGC TGTGCCGGGA GGACTACGAG GACGTGTGGC GCGAGATCCA GATCATGCAC CACCTCTCCG AGCACCCCAA CGTCGTCCGC ATCCGCGGCG CCTACGAGGA CGCGCTGTTC GTCCACATCG TCATGGAGCT CTGCGCCGGC GGCGAGCTCT TCGACCGCAT CGTCGCCAAG GGCCACTACA CCGAGCGCGC CGCCGCGCAG CTCATCCGCA CCATCGTCGC CGTCGTCGAG GGATGCCACT CGCTCGGCGT CATGCACCGG GACCTCAAGC CCGAGAACTT CCTCTTCGCC AGCGCCGCCG AGGACGCCCC CCTCAAGGCC ACTGATTTCG GCCTCTCCAT GTTCTACAAG CCTGGTATGT GTGGTTTCTT AGTTTCACAT TTGCTCATTT TGGTAAGCAA TTCGTTGTTG TTATTGTTCA TGTGTTTGCA TTAAAATTGT GTACTGCTTA TGTTGCATTC AAATGACTAA GTCGGAGCTT TGTTTATAGC TTGCCTTGGT TGAATCAATT AAGCTTAGTA ATAGTTCTTT CATACATTGT TCATTTGGCT GTCTTCAGAT TAATTGAACT CAGCAATAGT TCTTGCATAC ATTGTTCATT TTGCTGGAAG ACAGCTTACT TGTCTGCTAG ATTCTTACTT ACTTGTGGCC CATCTGTCCT TCTGTTACAC CCTGGTCTGC ACTCATACAT TGGGTTTTGG GTTTGAATAA ATGAGGCTGA GATATGTGTG TGGTATGACA TTGATATGAT AATGGGAGAG GGAATTGAAA CGTTCTTGGG TTCTAGCTGG AAACTCAATC TGTGCAAGTT AGTCCATTTT TGAGAAAAGG AATACCACAA ACAGTTCCTA CATCCTAGTA CTAGTAACTT TGATGTAAAT GGCAATAGTA CTGCTTTTGT GGTTTATCTC ATTTGAACTT TTTAATGCAT GTCAAATATT TTTTATGATA TTGTGATAGT TGCCAGCTGG TAATTTTCGC AAGGAACCAT TAAGTATTTA AGTGCTCTTA TGATTACGTT ATGTAACCTT AAAATGGGTA GGGAAGAGGT ATCTTTGTCT CCATGTAGTC ACTATTCAGC TAAGTCTAGT TCAATGGTAG TGTTATGTAT TGTTGGACAT GAGATTGGTT GCAAATTGCC TAATTTAGGA AGATGATGTG AAATGCAGTG TCATACCTAC TGCTACCACC ATCGCCATTG TTGTTGTTCC TTATTTGTTT GTATCTGTAC TGTGTATTTT GACTTGGATC TTGTCAGGAA TGCTGTATGA GTCATGTTAA GTTTATGAAA CTCTGATTTT CATTTCCTCA GGTGATAAGT TCTCTGATGT TGTTGGGAGC CCCTATTATG TTGCACCTGA GGTACTTCAG AAATGCTATG GTCCAGAATC TGATGTCTGG AGTGCTGGGG TAATTCTTTA CATTTTGCTA TGTGGTGTTC CACCATTTTG GGCAGGTAAA TTATTTGCCA CTAAACAACT AAATTAGTAG GTCCCTCCAA ATTCTCACGT TTCCATTGTC ATATTGTCTC TTGCCTTGCA GAAACTGAAG CTGGAATTTT CAGGCAGATT CTACGAGGCA AACTTGATTT TGAATCTGAA CCCTGGCCTA GCATCTCTGA CAGTGCTAAA GATCTAGTCC GTAATATGCT TTGCCGGGAT CCTACAAAGA GACTTACAGC CCATGAGGTT CTCTGTAAGT CAACCCTGTT TCCTACTCTT ACTCGCCATA GGTCTGCTTT GCTTAAATAT GACATAGGTA GGATGTCTTC TTTTTTCTCC TTGTGATGGC ATTGCCTATT CCAGGTCATC CATGGATTGT TGATGATGCT GTGGCACCTG ACAAGCCTAT TGATTCTGCT GTTTTGTCAA GACTGAAGCA CTTTTCGGCA ATGAACAAGC TCAAGAAGAT GGCATTGAGG GTACGGAGAT TTGTCTATAA GTTTGTGATT CAATTATTTG CTTATTTCAA TTACTCTCAG GTTGACCTTG TTTGCCTCAT ATATGAAAGG CACCTGACAA GTCTCATTTT CTCCCCTGAT TTGTTTGTAG GAAATGAATC TCACTGTTAA CTTCATTTAC TTATAAAAGT CTTGCATCTG TGGAATTCAA AAAATAATTA AGTGTTGATA TATTCTACAA CCATGTGCAT TTTTAGTAGA GAGAGCTATC TGATCTCTTG AATCATGATG CCTCTTTTCA TCCATTGACA CCACCTTTGT TTGAACCCAG GTTCATTTGG AATATATCCA GTAACTATTC TGTTCAGGTC AATGTTAACT AAGATGATGT AGCAAACTGA TTCTTTCTGA CATTTGTTTG GGGCTACACG AAACCTGTTT CCTTGGCAGC CCAGACACTT AATGCATTAT AGGCATCGTA GTTTTTCTTT TCTTTTGAAA TGCTCGATCT AGCTTGTGAA ACATGCAATG ATCATCTTGA GCTCTTTACA TATTGTTAAG TATCTTTCAT TTTGCAGGTT ATTGCTGAAA GCCTGTCTGA GGAAGAGATT GGAGGACTAA AGGAGCTATT CAAAATGATT GATACTGACG ATAGTGGAAC TATAACTTTT GATGAGCTGA AAGAGGGCTT GAAAAGGGTG GGTTCAGAAT TAACAGAACA TGAAATCCAG GCTTTAATGG AAGCGGTAAG TGCTTCTTTG TTAGTTGATC CTTCAGGGAA ATGTAACTTG CAGGGGCCTT CTGATCCTCA GCATTTTGTA TTTCTTGCAT GCTGTAATTT TTATGTCTCG TAATTTACAT CTCGGCATCT CTCTTGCCTT TGCTAAAATG GAAAAGAAAA ATCCTTCACT AGGAAAGAAA GGTGTTTTGT ATTAAGATTT AAGATAGCAT GTCTTGCTGC TTTTGCTAAA TTGTAATATG TTCATTTGTT TCAGGCTGAT ATCGACAACA GTGGAACCAT CGACTATGGT GAATTCATTG CTGCTACTCT CCACATGAAT AAGCTAGAGA GGGAGGAAAA CTTAGTATCA GCATTCTCAT TTTTCGACAA AGATGGAAGT GGTTTCATAA CTATTGATGA GCTGTCACAA GCATGCCGCG AATTTGGCCT TGATGATCTT CACCTTGAGG ATATGATTAA AGATGTTGAT CAAAACAATG TGAGTTGTTC TTATACTCTG CATTCTGTAG TTTGTCCAAT TTTTGACTTG TTTGTTCACC AATTGATTTC TTCACCCGTT TTCAGGACGG ACAAATTGAC TACAGCGAGT TCACGGCGAT GATGAGAAAG GGCAATGCTG GTGGAGCTGG AAGGAGAACC ATGAGGAACA GCTTGCAGTT GAATCTTGGT GAGATCTTGA ACCCCAGCAA CAGCTAAACT CCTACAGGAA GGCCATGGCT GTTACATGCC ATCATTGTCT GAATCTCTGC ACGCCTCATC AGCTGGACTA ATCTCTAAGA GGGCAAAGCC GTTGAGTGAA TTGTGCTTTG GCGTTACATG AGACGCTGAA GAATTTTCGT AGCAGTAATA GCTACAGCTA CTAGAGTGTA AGAGAAATTG GCGTTATGTG ATCGTAATAT CCTATCAGTG TAACTGATCT TAGATGATGC TGGAGATGAT AGTACAATGA ACAGCTTATA TGTATTCCTG TCCTTGTAGA CTGAACATTG TTGATAGTTG GGGAATGCTC TTGGCATC
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