Locus
Os11g0508600
Description
Sugar transporter, TAL effector-mediated susceptibility to bacterial pathogen
RAP-DB Gene Symbol Synonym(s)
11N3, OsSWEET14, Os11N3, Os-11N3, Xa41(t)
RAP-DB Gene Name Synonym(s)
11N3, Xanthomonas oryzae pv. oryzae resistance 41
CGSNL Gene Symbol
XA41
CGSNL Gene Name
XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 41
Oryzabase Gene Symbol Synonym(s)
OsSWEET14, SWEET14, Os11N3, Os-11N3, 11N3, Xa41(t), xa41, Os11N3/SWEET14
Oryzabase Gene Name Synonym(s)
Xanthomonas oryzae pv. oryzae resistance 41
Transcript Evidence
Protein Evidence
Literature
PMID: 21098734
PMID: 23879865
Note
Manual Curation
September 19, 2014
Gene Ontology (GO)
Cellular Component: integral component of membrane (GO:0016021)
Functional domain (InterPro)
SWEET sugar transporter, plants (IPR018179)
Full-length cDNA
J033071H09 (Online Clone Ordering)
Expression Databases
TENOR (Os11t0508600-01)
Others
Oryzabase (9105)
KEGG (Os11t0508600-01)
Transcript |
1492 bp |
>Os11t0508600-01 Sugar transporter, TAL effector-mediated susceptibility to bacterial pathogen ATCAAGCCTTCAAGCAAAGCAAACTCAAGTAGTAGCTGATTACCAGCTCTTCTCTCTTCT CATTGAGAAGAGGGAATTAAGTTTTGATCTCTGCTTTATTGCCTGATCATCCTCTTGTTA CTTGCAAGCAAGAACAGTAGTGTACTGTGCCTCATTGATCTCCTCCCACCAAACTCTCTC TCTCTCTCTCATATTCCGAGCTAGCTAGTTAATCAAGATCTTGCTGCAATGGCTGGCATG TCTCTTCAGCATCCCTGGGCCTTCGCCTTTGGTCTCCTAGGCAACATCATCTCCTTCATG ACCTACCTGGCCCCACTGCCGACGTTCTACAGGATCTACAAGAGCAAGTCGACGCAGGGG TTCCAGTCGGTACCCTACGTGGTGGCGCTGTTCAGCGCGATGCTGTGGATCTACTACGCG CTGCTCAAGTCCGACGAGTGCCTCCTCATCACCATCAACTCCGCTGGCTGCGTCATCGAG ACCATCTACATCGCCGTCTACCTCGTCTACGCCCCCAAGAAGGCCAAGATGTTCACCGCC AAGCTCCTCCTCCTCGTCAACGTCGGCGTCTTCGGCCTCATCCTCCTCCTCACCCTCCTC CTCTCCGCCGGCGACCGCCGCATCGTGGTTCTTGGTTGGGTCTGCGTTGGCTTCTCCGTC AGCGTCTTCGTCGCCCCCCTTAGCATCATCAGGCTGGTGGTGCGCACCAAGAGCGTGGAG TTCATGCCGTTCTCGCTCTCCTTCTCCCTCACCATCAGCGCCGTCGTCTGGTTCCTCTAC GGCCTCCTCATCAAGGACAAATATGTCGCTCTTCCCAACGTGCTGGGCTTCTCCTTCGGC GTCATCCAGATGGGGCTGTACGCCATGTACAGGAACTCGACGCCCAAGGCCGTGCTGACC AAGGAGGTCGAGGCGGCGACGGCCACCGGCGACGACGACCACTCCGCCGCCGGCGTCAAG GAGCACGTCGTCAACATCGCCAAGCTCTCTGCCGCCGTCGACGTCGTCAAGACCCGCGAG GTGCACCCCGTCGACGTCGAGTCCCCGCCGGCAGAGGCGCCGCCTGAGGAGGACGACAAG GCCGCCGCCGCCACCGCCGCCGCCGTCGCCGGCGCCGGCGAGAAGAAGGTAGCTGCATGA GTGCGTGCATGCGTACATGGGTCGCCGTAAGAAGGAAGAAGGCGTGACGTGTCCAGCCCG TACGCGCGCCACGTGGCCAAGCTAGCTTCAGAGCTAGTGAAGCTGCAGACATGCTAGCTG GCTAGCTAGCAGTGAGAGAGTGCGACGACTAAAAAAAAAGTAGTGATTAATTAAGGGCTT GTAATTTAATCGTTGTTTTTTTTTTCTCTGTTTCGTTGAGATCGATATCGTTGTCACCAT GCATGTATTTCGTTTTTGATTCTCAGTAATTAATTAGATGGGCTTTCTGTAATTCAACCT GTAAGGGTTCCTTCCATGATTAATTAATTAGCGTGTTAATAATTGTCCCACC
CDS |
912 bp |
>Os11t0508600-01 Sugar transporter, TAL effector-mediated susceptibility to bacterial pathogen ATGGCTGGCATGTCTCTTCAGCATCCCTGGGCCTTCGCCTTTGGTCTCCTAGGCAACATC ATCTCCTTCATGACCTACCTGGCCCCACTGCCGACGTTCTACAGGATCTACAAGAGCAAG TCGACGCAGGGGTTCCAGTCGGTACCCTACGTGGTGGCGCTGTTCAGCGCGATGCTGTGG ATCTACTACGCGCTGCTCAAGTCCGACGAGTGCCTCCTCATCACCATCAACTCCGCTGGC TGCGTCATCGAGACCATCTACATCGCCGTCTACCTCGTCTACGCCCCCAAGAAGGCCAAG ATGTTCACCGCCAAGCTCCTCCTCCTCGTCAACGTCGGCGTCTTCGGCCTCATCCTCCTC CTCACCCTCCTCCTCTCCGCCGGCGACCGCCGCATCGTGGTTCTTGGTTGGGTCTGCGTT GGCTTCTCCGTCAGCGTCTTCGTCGCCCCCCTTAGCATCATCAGGCTGGTGGTGCGCACC AAGAGCGTGGAGTTCATGCCGTTCTCGCTCTCCTTCTCCCTCACCATCAGCGCCGTCGTC TGGTTCCTCTACGGCCTCCTCATCAAGGACAAATATGTCGCTCTTCCCAACGTGCTGGGC TTCTCCTTCGGCGTCATCCAGATGGGGCTGTACGCCATGTACAGGAACTCGACGCCCAAG GCCGTGCTGACCAAGGAGGTCGAGGCGGCGACGGCCACCGGCGACGACGACCACTCCGCC GCCGGCGTCAAGGAGCACGTCGTCAACATCGCCAAGCTCTCTGCCGCCGTCGACGTCGTC AAGACCCGCGAGGTGCACCCCGTCGACGTCGAGTCCCCGCCGGCAGAGGCGCCGCCTGAG GAGGACGACAAGGCCGCCGCCGCCACCGCCGCCGCCGTCGCCGGCGCCGGCGAGAAGAAG GTAGCTGCATGA
Protein |
303 aa |
>Os11t0508600-01 Sugar transporter, TAL effector-mediated susceptibility to bacterial pathogen MAGMSLQHPWAFAFGLLGNIISFMTYLAPLPTFYRIYKSKSTQGFQSVPYVVALFSAMLW IYYALLKSDECLLITINSAGCVIETIYIAVYLVYAPKKAKMFTAKLLLLVNVGVFGLILL LTLLLSAGDRRIVVLGWVCVGFSVSVFVAPLSIIRLVVRTKSVEFMPFSLSFSLTISAVV WFLYGLLIKDKYVALPNVLGFSFGVIQMGLYAMYRNSTPKAVLTKEVEAATATGDDDHSA AGVKEHVVNIAKLSAAVDVVKTREVHPVDVESPPAEAPPEEDDKAAAATAAAVAGAGEKK VAA*
5'UTR
chr11:18174251..18174478 (- strand) : 228 bp
CDS
chr11:18174199..18174250 (- strand) : 52 bp
chr11:18173429..18173465 (- strand) : 37 bp
chr11:18172760..18173132 (- strand) : 373 bp
chr11:18172541..18172660 (- strand) : 120 bp
chr11:18172059..18172388 (- strand) : 330 bp
3'UTR
chr11:18171707..18172058 (- strand) : 352 bp
FASTA
>Os11t0508600-01 class=Sequence position=chr11:18171707..18174478 (- strand) ATCAAGCCTT CAAGCAAAGC AAACTCAAGT AGTAGCTGAT TACCAGCTCT TCTCTCTTCT CATTGAGAAG AGGGAATTAA GTTTTGATCT CTGCTTTATT GCCTGATCAT CCTCTTGTTA CTTGCAAGCA AGAACAGTAG TGTACTGTGC CTCATTGATC TCCTCCCACC AAACTCTCTC TCTCTCTCTC ATATTCCGAG CTAGCTAGTT AATCAAGATC TTGCTGCAAT GGCTGGCATG TCTCTTCAGC ATCCCTGGGC CTTCGCCTTT GGTCTCCTAG GTGTGTTGCC TTTGATCTGA TCCAAGGAAT TCTCTTGAGA ATTAATCTTG CATGGTTATT TACTTTTGTT GTTATTATTC TCTACATTTT TAATCATGTA CTTTTCCATG TTCCACTTTT GTTGCCAAAG CTACTATATT TTTCCTACCA ATTCATCCAA AACTACTATA TTATAGCAAG GCAGCTAGTG GATCGACTTT GCACTTTTGG ATGCAATTGT GAGTGGTTTA CATTAGAGGG GCCATGCATA GCCAAATAAA TTGTTTGGCA AAATATGATT TCCCTTGTAG TTAGCACAAT ATTGTGATCT TTCATTCCTT TACTCTTTTT GTTCCACCAC CCTCATTATT GCAAAGCCCC CTCTTTTAGA ACCAAACTAA AGATAAGAAA CATTTGATTC ATCATTAGAG GAGATTAGAT ATACATACAT ACTACACATG CATTGCTGTG ATAAGCCTAG CCAGGCACAG AAAGAGCCAA GACAAAAGGA GCTCAAAAGA AAAGGGGCTC CAATATCTTG CCCGGCCTGA TCAGTGTAAC ATGACGTCAC CCACACAATT ATTAAAAGGA TAGATGCATA TGTGTTCGTT ACGTATCTCC TTGTGTCACG TTGCTGTGCA TGGTTCACTC GCTTAATTAT AACGTCCGTC GCATTTTATG CATGCACTTC GTTTTTAGTT AATCAAATTA AACAAGATCC TAACATATGA TTTCTATTTT ATTCTCTTTG CAGGCAACAT CATCTCCTTC ATGACCTACC TGGCCCCACT GTAAGTCCCA CACATCCGGA TATTTTCTTT TCTTTAGCga aattttacat tgctccagaa agtacctttt acactaaaat ttcttataca ccaccataaa attaatgtgg tactattggt accttatcaa aaatgataaa attaccTTTT TCTTCAGATA AAAACACTCC CCGTCTCTGT ATAACTAAGA TGTAGACAAC CAATACACAT GTCTAGAGCT AATCCTATCA ATTAACATTG CTAGTAAATA CAAGGAAAAA TATAAAGAAT TAACCAATTG CTTGGATGTC TTGCAGGCCG ACGTTCTACA GGATCTACAA GAGCAAGTCG ACGCAGGGGT TCCAGTCGGT ACCCTACGTG GTGGCGCTGT TCAGCGCGAT GCTGTGGATC TACTACGCGC TGCTCAAGTC CGACGAGTGC CTCCTCATCA CCATCAACTC CGCTGGCTGC GTCATCGAGA CCATCTACAT CGCCGTCTAC CTCGTCTACG CCCCCAAGAA GGCCAAGATG TTCACCGCCA AGCTCCTCCT CCTCGTCAAC GTCGGCGTCT TCGGCCTCAT CCTCCTCCTC ACCCTCCTCC TCTCCGCCGG CGACCGCCGC ATCGTGGTTC TTGGTTGGGT CTGCGTTGGC TTCTCCGTCA GCGTCTTCGT CGCCCCCCTT AGCATCATCG TAAGAAACCC TAGAATTGCC TGTAAACAAT AATAACTTTC GGTCTCTGCA CCAACTAAGG ATGCACATAT TTACGCACCG CTTTTGCTAT CTCTGCAGAG GCTGGTGGTG CGCACCAAGA GCGTGGAGTT CATGCCGTTC TCGCTCTCCT TCTCCCTCAC CATCAGCGCC GTCGTCTGGT TCCTCTACGG CCTCCTCATC AAGGACAAAT ATGTCGCTGT GAGTAGCTCC GATTCGACCC GTTCTTCTTC CTAAATTTTC CGCTGCTCGA TTTAATTTCT ATTTCTAATT GTGGAAGATT GTTTAATTAT AGTGATTATG GCTAGCTGAT AACCGATTTT AATTTCTGAT GGTGATCCAA AATGGAACAG CTTCCCAACG TGCTGGGCTT CTCCTTCGGC GTCATCCAGA TGGGGCTGTA CGCCATGTAC AGGAACTCGA CGCCCAAGGC CGTGCTGACC AAGGAGGTCG AGGCGGCGAC GGCCACCGGC GACGACGACC ACTCCGCCGC CGGCGTCAAG GAGCACGTCG TCAACATCGC CAAGCTCTCT GCCGCCGTCG ACGTCGTCAA GACCCGCGAG GTGCACCCCG TCGACGTCGA GTCCCCGCCG GCAGAGGCGC CGCCTGAGGA GGACGACAAG GCCGCCGCCG CCACCGCCGC CGCCGTCGCC GGCGCCGGCG AGAAGAAGGT AGCTGCATGA GTGCGTGCAT GCGTACATGG GTCGCCGTAA GAAGGAAGAA GGCGTGACGT GTCCAGCCCG TACGCGCGCC ACGTGGCCAA GCTAGCTTCA GAGCTAGTGA AGCTGCAGAC ATGCTAGCTG GCTAGCTAGC AGTGAGAGAG TGCGACGACT AAAAAAAAAG TAGTGATTAA TTAAGGGCTT GTAATTTAAT CGTTGTTTTT TTTTTCTCTG TTTCGTTGAG ATCGATATCG TTGTCACCAT GCATGTATTT CGTTTTTGAT TCTCAGTAAT TAATTAGATG GGCTTTCTGT AATTCAACCT GTAAGGGTTC CTTCCATGAT TAATTAATTA GCGTGTTAAT AATTGTCCCA CC
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