Os11t0622800-00

Locus

Os11g0622800

Description

Putative cinnamyl alcohol dehydrogenase 4.

RAP-DB Gene Symbol Synonym(s)

RAP-DB Gene Name Synonym(s)

CGSNL Gene Symbol

CAD4

CGSNL Gene Name

CINNAMYL ALCOHOL DEHYDROGENASE 4

Oryzabase Gene Symbol Synonym(s)

OsCAD4

Oryzabase Gene Name Synonym(s)

Cinnamyl alcohol dehydrogenase 4

Transcript Evidence

Q2R114 (UniProt)

Protein Evidence

Q2R114 (UniProt)

Literature

Note

  • Exon-intron structures, exon and CDS sequences are different between Build 5 and IRGSP-1.0.

Manual Curation

Gene Ontology (GO)

Biological Process: oxidation-reduction process (GO:0055114)

Molecular Function: nucleotide binding (GO:0000166)

Molecular Function: zinc ion binding (GO:0008270)

Molecular Function: oxidoreductase activity (GO:0016491)

Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616)

Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747)

Molecular Function: cofactor binding (GO:0048037)

Functional domain (InterPro)

Alcohol dehydrogenase superfamily, zinc-type (IPR002085)

Alcohol dehydrogenase, zinc-type, conserved site (IPR002328)

D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (IPR006140)

GroES-like (IPR011032)

Alcohol dehydrogenase, C-terminal (IPR013149)

Alcohol dehydrogenase GroES-like (IPR013154)

NAD(P)-binding domain (IPR016040)

Polyketide synthase, enoylreductase (IPR020843)

Expression Databases

TENOR (Os11t0622800-00)

Others

Oryzabase (10433)

Transcript

1065 bp

>Os11t0622800-00 Putative cinnamyl alcohol dehydrogenase 4.
ATGGCTGCTGAATGTGGGAGTGGCAACTGTGATGCTTGGGCAGCGAGAGATCCTTCCGGA
ATCCTCTCCCCGTACAAATTCAACCGCAGGGAAGTACAGAGTGAAGATGTTTCTTTGAGG
ATCACACACTGTGGAGTATGTTATGCTGATGTCATTTGGACACGGAATATGTTCAACGAT
TCGATATACCCTTTGGTTCCTGGGCACGAGATAGCTGGAGTTGTAACTGAGGTTGGTGCA
GACGTCAAGGGGTTCAAAGTGGGCGACCATGTAGGTGTTGGCGTATATGTGAATTCATGT
CAGGACTGCGAGAACTGCAATAGCTCTCTGGAGAACCACTGCTCGAAATGTGTCGTCACT
TACAACAGTGTTGATTCAGACGGGACCGTAACAAAGGGTGGATATTCCAGTCATATACTA
GTGCATCAAAGGTACTGCTTTAAAATACCTGCTGACTACCCTTTGTCAAAGGCAGCACCA
CTGCTTTGTGCGGGAATTACCGTATATACTCCAATGATACGACATAACATGAACCAACCA
GGGAAGTCACTTGGCGTCATTGGACTAGGTGGGTTGGGTCACATGGCAGTAAAATTTGGG
AAAGCCTTTGGACTCAAAGTGACAGTTTTTAGTACAAGTGAATCAAAGAGAGAAGAAGCT
ATCAACCTTCTTGGTGCAGATAATTTTGTGATATCATCAGATGAAAATCAGATGGAGTCA
CTGAAAAGTTCCCTTCACTTCATTATTGATACTGCATCTGGTGATCACCAGTTCGATCCT
TATCTCTCGCTTCTGAAAGTTGGTGGTGTAATGGTGCTACTTAGCTTCCCAAGTGAAATC
AAAGTTCATCCTGAAAACCTTAATCTCGCTGCGCGGAGCTTAGCTGGTAGTGTAACAGGG
GGTACAAAGGATATCCAGGAGATGATAAACTTCTGTGCTGCAAACAATGTTTACCCAGAT
ATAGAGATGATCAAGATAGACTACGTCAACGAGGCTCTTCAGAGGCTCATCAACCGGGAT
GTGAGATTCCGCTTTGTAATCGACATCGAGAACTCTTTCAAGTAG

CDS

1065 bp

>Os11t0622800-00 Putative cinnamyl alcohol dehydrogenase 4.
ATGGCTGCTGAATGTGGGAGTGGCAACTGTGATGCTTGGGCAGCGAGAGATCCTTCCGGA
ATCCTCTCCCCGTACAAATTCAACCGCAGGGAAGTACAGAGTGAAGATGTTTCTTTGAGG
ATCACACACTGTGGAGTATGTTATGCTGATGTCATTTGGACACGGAATATGTTCAACGAT
TCGATATACCCTTTGGTTCCTGGGCACGAGATAGCTGGAGTTGTAACTGAGGTTGGTGCA
GACGTCAAGGGGTTCAAAGTGGGCGACCATGTAGGTGTTGGCGTATATGTGAATTCATGT
CAGGACTGCGAGAACTGCAATAGCTCTCTGGAGAACCACTGCTCGAAATGTGTCGTCACT
TACAACAGTGTTGATTCAGACGGGACCGTAACAAAGGGTGGATATTCCAGTCATATACTA
GTGCATCAAAGGTACTGCTTTAAAATACCTGCTGACTACCCTTTGTCAAAGGCAGCACCA
CTGCTTTGTGCGGGAATTACCGTATATACTCCAATGATACGACATAACATGAACCAACCA
GGGAAGTCACTTGGCGTCATTGGACTAGGTGGGTTGGGTCACATGGCAGTAAAATTTGGG
AAAGCCTTTGGACTCAAAGTGACAGTTTTTAGTACAAGTGAATCAAAGAGAGAAGAAGCT
ATCAACCTTCTTGGTGCAGATAATTTTGTGATATCATCAGATGAAAATCAGATGGAGTCA
CTGAAAAGTTCCCTTCACTTCATTATTGATACTGCATCTGGTGATCACCAGTTCGATCCT
TATCTCTCGCTTCTGAAAGTTGGTGGTGTAATGGTGCTACTTAGCTTCCCAAGTGAAATC
AAAGTTCATCCTGAAAACCTTAATCTCGCTGCGCGGAGCTTAGCTGGTAGTGTAACAGGG
GGTACAAAGGATATCCAGGAGATGATAAACTTCTGTGCTGCAAACAATGTTTACCCAGAT
ATAGAGATGATCAAGATAGACTACGTCAACGAGGCTCTTCAGAGGCTCATCAACCGGGAT
GTGAGATTCCGCTTTGTAATCGACATCGAGAACTCTTTCAAGTAG

Protein

355 aa

>Os11t0622800-00 Putative cinnamyl alcohol dehydrogenase 4.
MAAECGSGNCDAWAARDPSGILSPYKFNRREVQSEDVSLRITHCGVCYADVIWTRNMFND
SIYPLVPGHEIAGVVTEVGADVKGFKVGDHVGVGVYVNSCQDCENCNSSLENHCSKCVVT
YNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQP
GKSLGVIGLGGLGHMAVKFGKAFGLKVTVFSTSESKREEAINLLGADNFVISSDENQMES
LKSSLHFIIDTASGDHQFDPYLSLLKVGGVMVLLSFPSEIKVHPENLNLAARSLAGSVTG
GTKDIQEMINFCAANNVYPDIEMIKIDYVNEALQRLINRDVRFRFVIDIENSFK*

CDS

chr11:24302518..24302606 (+ strand) : 89 bp

chr11:24303023..24303136 (+ strand) : 114 bp

chr11:24303550..24303777 (+ strand) : 228 bp

chr11:24306822..24307107 (+ strand) : 286 bp

chr11:24307300..24307450 (+ strand) : 151 bp

chr11:24307639..24307835 (+ strand) : 197 bp

FASTA

>Os11t0622800-00 class=Sequence position=chr11:24302518..24307835 (+ strand)
ATGGCTGCTG AATGTGGGAG TGGCAACTGT GATGCTTGGG CAGCGAGAGA TCCTTCCGGA ATCCTCTCCC CGTACAAATT
CAACCGCAGG TGAATGATCA CATAACATTC CATTGAGATT TTGTAACGAA AAATGTCAAC TTTGAAACAT GAATGTCTTT
CTAGCATTGT TAAGAGATCT TCCTAGTCTC CAGTGCTCTC TCATATAAGC AAAATGAACT ATATATCCAG CCACTTAAAT
CATGGCCAAT TTCACTTTTC GGCTAGTTGC ATTCATAGTT GGAATGTGAG TGTCAGCTTG CCAAGTTAGT TGTGTCGATT
TTTGTTCTTG CCAGCTCGAC AAACTGGATC ACAAAATCGA TAGTTTTTTA TTGAATGCCG TGAAAAACGA GTGGACAAAA
TATTTAAATG TCTACACAGA CTTACTGGAT TAAGATTGCA AAATTAATTA GTTGATTCAT ATTTTACTGC ATGTTCTAGT
TGATCGATAA CCTGATTGAT TTCAGGGAAG TACAGAGTGA AGATGTTTCT TTGAGGATCA CACACTGTGG AGTATGTTAT
GCTGATGTCA TTTGGACACG GAATATGTTC AACGATTCGA TATACCCTTT GGTTCCTGGG TAAGATCGAT TGTCAGATCA
ATTTACCATA CTTGAGATTT CAGAACAGCG GGGAAAATGA TAAGCTCCAG TCTTTCTGTG TTACGGATCA TAATTAAATT
GCTAGCTAGC TAGCtactcc ctcccgtatt ctaatgtgac ttttcaacta acgttgacca ttcgttttat tcaaaaattt
tatgcaaata tgaaaatatt tatgtcatgc ttaaaaaaca tttgatgacg aatcaagtca taataaaata aatgataatt
atataaattt tttgaataag acgaatggtc aaacgttgga taaaaattca acggcgtcat acattaaaat atggaggtag
taGTACTTTT GTTTGATGCA AAGATAAATG TTTACCCCCT AAATCGGGTG TCTTAACATT CAATTTGAGT AGGCACGAGA
TAGCTGGAGT TGTAACTGAG GTTGGTGCAG ACGTCAAGGG GTTCAAAGTG GGCGACCATG TAGGTGTTGG CGTATATGTG
AATTCATGTC AGGACTGCGA GAACTGCAAT AGCTCTCTGG AGAACCACTG CTCGAAATGT GTCGTCACTT ACAACAGTGT
TGATTCAGAC GGGACCGTAA CAAAGGGTGG ATATTCCAGT CATATACTAG TGCATCAAAG GTACTCTGCT TTCTTGTTAA
TTTTCTGACA TAACAAACCG ACCAAAAAGt actccctcca tttcaagtta taatatgttt taactttagt cgaagttaaa
atgtttttaa gtttgactaa gtttacagat aaatatagta atatttataa tactaaatta gtttcatcaa atcaataatt
gaatatattt ttataataaa tttgtcttgg gttgaaaatg ctactacctt ttttataaac ttggtcaaac ttaaagccat
ttgactttaa ccaaaatcaa aacatattat aacctgaaac ggacggagta ATAATTATAT TAGTTATATA GACATAAATC
TTATAAATAA TGTGGATTAT ATATCCATGG Gtaggggtga aaatggtatg gaaatttctc gaccgtaccg ataccgtttc
cgcaaaacta atataataat aataatttta ccgatgttac cgttttcaaa atttagtttt tttaatttct gtcagcgtgg
cattgaagtt ggcactaaat agatgaattc ataaatatgg aaatttcccg accgtttctg ttcgttttcc aaaaaaataa
taaaataatg tactgtttcc gaccatttcc gaccgttttc atccctaTCC ATGGGGGAGT ACTGGGTTCG TACCCACTGA
ACACGTATCT TAATACTAAA TGACAGGTTT TAAACTGAAA TGtactacct ccgtcccaaa ataagtgcag ccgtggatat
ccgtgtccaa TGtactattc atattttatc atctaataac tataaaaata ctaatcataa aaaaaattta aataaaacga
acagtcaaac gtttaacatg aagaatacaa aactacattt attttaggac ggagagagta ATAAACAAGG TACGAAAGTG
TCAAATATGG AGTTATAATT CTATATGGGT ATGGATCATA AAGAATTCTC CATATATATA TATTACTCCC TCCGGTCCAT
AATAAACAAG GTACGAAAGT GTCAAATATG GAGTTATAAT TCTATTATAT GGGTATGTAT CATAAAGAAT TCTCCATATA
TATAtattac tccctccggt ctaaaatata gcaattttta ggtagatatg atatataata gtACTACGAA TCTAGATAAA
AGGTTGTTAT ACTTTGGAAT AGAGGAAGTA GGAAATATGG GGATGCAGTT ACGGATTGAA CACATCTGAT TGAACATTAA
AACTCAAGCA CCCGACATAC TCTGAGTTGC TGCGCTCTAA TCATATCCGC GTGCACGCAT TTACTCTTTT CGCTGAGTTT
GGCTGCAACA TACgtactcc ctccgtctaa aaaaagacaa accattagtt tctgtcttat ataattgttt tttataatta
gtattttcat tgttgttaga taataaaaca tgattaatac tttatacgtg acttatcttt ttaatttttt ttaaataaga
cggacgttgg acacaaaaat tcaggatttt tttcttgacg gagggagtac tggtCACTGT ATTCTGTTGA ATGCAAGCCC
GTCTCCTGCT CTCTTCTCTA ACAACACTTT AGCAAAACTT TAAAAATACT TTTTTATAAA TTATTTATCT AATTTGATTC
GATTACATAA TTGTATATGT ATATACATGA TTATATTTAT AATTGAAATA TTTTTATGTC ATATATGAAA CATCGAGTAC
TTCTAATTAA AATATTTTTA TATCATATAT AAAACATCGA GTTGTAGTTG CTAAAAGAGT ACAAAATACT TGATGGAACt
gttggcaact tttcgtgata agttgacaag cacgatcgca acacctaaac gcctggcggt gatcctagag tcgccaacta
cctcgatcta gcaaaagcta aatcaagatg ggttttgata actaaatcgg ctagcggagc cgattctaaa taactacccg
tctcgtgggc aaaatagaag gttttcagga caaatctaca aagaggtgtc gcactctcgc agcggcggcg tacgatttac
agcgcaaatc gacaaagatg gacgaactaa agcaaaaact aaaagcaata tgaaaaacga ttcgattgat tgattgtaga
ttgattagtt acaattgaac cgaccatgtc ccttatatag gggttggtcc tgccctctac agaccctcct ccacgtccaa
ctcgggatag aatccaaagg aaacccgaaa catgccttcc cgagtaagga aactttgaga cccgacgaaa tacactcgga
ctcggaccct gctggtcaga ccggccacat accggcggtc tgaccggcca acacatggcg gtcagaccga cccactcgaa
agaaaccggc agacttccaa actctggcaa ttttttctat tttactctta gatgccaaat ttgggtgtaa acaGGAACAT
CAAAGAACAC CATTGCACTT ACAATATTTA CAAATGAATT AGAGAAATAT CATAAATATT TTGTTAAAAC ATCCCAGCAA
CGCCGTGTGC AATGACTCAC TTTTCATTTT CACAAACATT TACAAATGAT TCAACCCCTA AATAAAATTT TGGGTTATTT
TACCAGCTAA ACTATTTGAC ACGACTCACT TTACTCCCCA GTGGTATTTG TCCTTTTCAT TTCATTTTAT ATAAGTCGTA
TTTTGAGTTG AAACTTTGTA TAGCCGTAGA TGACATCATA TACTATGTTA CAAAATATTT TTAAAAAATT TATACTATGG
TTTGCTTGTA GGTTTAAATA AGTTTCAGGT GCTTTCAACA TATGCAAACA GTGATTAAAA TCCAAAAAAA AAGTTTGAGA
TGTAAGGTGC AATGTTATCT TTATCTCACA AATTTGAACT TAAAATGTCT GTTATAAAAG AGAAAATGGT CTGTCATTAC
TTCTGTATTA TGTTGATTAC AATTACCATA TAATTAAGTA ATCTTGGGAC TACGAATGTT TGTATTAGCT GCCCTTCTAT
CTACTGATGT GAAAAACATT GTAATTAAGC TAATTGCATC TTCTTTGTTT CATTGACATG GCAGGTACTG CTTTAAAATA
CCTGCTGACT ACCCTTTGTC AAAGGCAGCA CCACTGCTTT GTGCGGGAAT TACCGTATAT ACTCCAATGA TACGACATAA
CATGAACCAA CCAGGGAAGT CACTTGGCGT CATTGGACTA GGTGGGTTGG GTCACATGGC AGTAAAATTT GGGAAAGCCT
TTGGACTCAA AGTGACAGTT TTTAGTACAA GTGAATCAAA GAGAGAAGAA GCTATCAACC TTCTTGGTGC AGATAATTTT
GTGATATCAT CAGATGAAAA TCAGATGGAG GTACATTGTA AAAATATTTT TTGCTCCATT GTGTAGAATT ATTTTGCTAC
TCCTATATAT GAGCATGCCG ATCATAAGTT GTTTTATTGG CAAATGTCAT TTGGAAAATA TGGTGCTAAT AACTTCTTCT
TGTCTTCTCA TTCCTCTTGC AACAAACTAA ATGTGCTTAT GACAAATTAA TCATTGTTGC AGTCACTGAA AAGTTCCCTT
CACTTCATTA TTGATACTGC ATCTGGTGAT CACCAGTTCG ATCCTTATCT CTCGCTTCTG AAAGTTGGTG GTGTAATGGT
GCTACTTAGC TTCCCAAGTG AAATCAAAGT TCATCCTGAA AACCTTAATC TCGGTAATGC ATATTTCTCA TACCAATATA
TATATATATA TATATATATA TATATATATA TATATATATA TATATATATA TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
TGTGTGTGTG TGTGGTGTGT GTGTCTGACA GAATGGGGAG AAAATTAATG GATTAATTAC AAGTAATCTG AACTTACGCA
GCTGCGCGGA GCTTAGCTGG TAGTGTAACA GGGGGTACAA AGGATATCCA GGAGATGATA AACTTCTGTG CTGCAAACAA
TGTTTACCCA GATATAGAGA TGATCAAGAT AGACTACGTC AACGAGGCTC TTCAGAGGCT CATCAACCGG GATGTGAGAT
TCCGCTTTGT AATCGACATC GAGAACTCTT TCAAGTAG

Locus: Os11g0622800

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Locus: Os11g0622800

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