Locus
Os12g0113500
Description
Similar to CBL-interacting protein kinase 14.
RAP-DB Gene Symbol Synonym(s)
RAP-DB Gene Name Synonym(s)
CGSNL Gene Symbol
CIPK14
CGSNL Gene Name
CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 14
Oryzabase Gene Symbol Synonym(s)
OsCIPK14, OsSnRK3.33, SnRK3.33
Oryzabase Gene Name Synonym(s)
CBL-interacting protein kinase 14, Sucrose nonfermenting-1-related protein kinase 3.33
Transcript Evidence
AK242733 (DDBJ, Best hit)
AK243050 (DDBJ, Best hit)
Protein Evidence
Q2QYM3 (UniProt)
Literature
Note
- Exon-intron structures and exon sequences are different between Build 5 and IRGSP-1.0.
Manual Curation
Full-length cDNA
J090047O22 (Online Clone Ordering)
J100011E04 (Online Clone Ordering)
Expression Databases
TENOR (Os12t0113500-01)
Others
Oryzabase (7401)
Transcript |
2028 bp |
>Os12t0113500-01 Similar to CBL-interacting protein kinase 14. GCATCCACTCCACATACTACCACTCAAAAACTCTCTCTCTCTACCCAAACAGGTTTTGAG AAAGAAGTGGAGGACAGATCCAAAAAGTTCACCTTTTGATTATCCAAACAAGTTTGGAGT TTGTTACCTGAATCTCCTCTTCTTCCTGTCACCGGAAGGGAAATTGATAAAAAAAAAGCA GTGAAAGCCTCAAGGAATGCTGAAAGATGTGCTTGCATAGAAGAAATTTTCCGTGTGAGA TAAAGCAGATTGCTGGTTCACTAGTGCTACTGATCTGCTCAAGTCTTGATGTGAGTGATC AACTTTCCTGCACTAATTCTACACCATTTAGACTCCGAAACGACGATGATATAAGAATGT TGTTCTCCATTCATGATCATGACCTTGGGGAGGATGGCTAAAGAATTGCAGTCCATCTGA TTGGTGGTCAAAACATAGTGCTGAGATTTATATCTTTGTGGGCATGGAGAGTAGAGGGAA GATACTAATGGAGAGGTATGAGTTGGGCAGATTGTTGGGGAAAGGAACATTTGGCAAGGT GCACTATGCAAGGAATCTGGAGTCAAACCAGAGTGTGGCCATAAAGATGATGGACAAACA GCAGGTGTTGAAGGTCGGGCTTTCGGAGCAGATCAGACGTGAGATCACAACCATGCGGTT GGTGGCTCATAAGAACATTGTTCAGCTTCATGAGGTCATGGCAACACGGAACAAGATCTA CTTTGTGATGGAGTATGTGAAAGGTGGTGAGCTATTTGAAAAGGTTGCAAAGCGTGGAAA GCTTACAGAGGTTGTTGCACATAAGTACTTCCAGCAACTCATTAGTGCAGTGGATTACTG CCACAGTCGAGGTGTGTATCACCGGGACTTGAAGCCTGAAAACCTGCTGTTGGATGAGAA TGAGAACCTGAAAGTCTCAGACTTTGGACTGAGTGCGCTTTCAGAGTCGAAGAGGCAAGA TGGCTTACTCCATACCACCTGTGGAACACCTGCATATGTAGCTCCAGAGGTGATCAGCAA GATAGGATATGATGGTGCAAAGTCAGATATTTGGTCTTGTGGTGTTATCCTGTTTGTTCT TGTTGCTGGTTACCTTCCTTTCCAGGGCCCAAACTTGATGGAAATGTATCGGAAGATACA ACATGGTGAATTCAGGTGCCCCGGTTGGTTTTCACGCAAACTTCAGAAGTTGTTGTACAA GATCATGGACCCCAACCCAAGCACAAGGATTTCAATCCAGAAGATAAAGGAGTCTACCTG GTTCCGGAAAGGTCCTGAGGAGAATCGTATTTTGAAGGAAAGAACTTTGAATGAAAACAC CACCAAAAATGTTGCTCTGGTGCTTGGTGTGAGACGCAAGAAAAATGCTCATGAAGATGT GAAGCCCATGTCAGTGACAAACTTAAATGCCTTTGAAATTATCTCTTTCTCCAAGGGGTT TGATCTCTCTGGCATGTTCATTGTAAAGGAATGGAGAAATGAGGCAAGGTTCACTTCAGA TAAATCTGCCTCAACCATAATCTCAAAGCTAGAAGATGTAGCAAAGGCGCTAAATCTCAG GGTAAGGAAGAAAGACAATGGTGTAGTGAAGATGCAAGGGAGGAAGGAGGGAAGGAATGG TGTTCTTCAGTTTGACATAGAGATATTTGAGGTTACCACTTCCTATCATATCATCGAGAT GAAACAAACAAGTGGCGATTCATTGGAGTACCGACAGCTACTGGAGGAGGGCATCCGGCC AGCTCTGAAGGACATTGTCTTGGCCTGGCATGGAGATGAATAGCAGCAGTCGCAAGAGTA GATTTTGATGTCTCAAGCATTTAGTTTCCGCTCCTCAAATTCATTAGGTTTTAGCTCAAA TGAATTTATTTGTCTTGCCTATGTTCTTTTTAGCATCTATGTTTTTGTATCTGGAGAGTT CATGTTGAGGCAATCTATGCACAATTTAGATGGAGTCTGTCGAGAGTAATTTTATGAGAA GTTGAGCTGCAATATAAAAGTTGGCTTTGAGCCTTTCAAGCTTTCTTC
CDS |
1320 bp |
>Os12t0113500-01 Similar to CBL-interacting protein kinase 14. ATGGAGAGTAGAGGGAAGATACTAATGGAGAGGTATGAGTTGGGCAGATTGTTGGGGAAA GGAACATTTGGCAAGGTGCACTATGCAAGGAATCTGGAGTCAAACCAGAGTGTGGCCATA AAGATGATGGACAAACAGCAGGTGTTGAAGGTCGGGCTTTCGGAGCAGATCAGACGTGAG ATCACAACCATGCGGTTGGTGGCTCATAAGAACATTGTTCAGCTTCATGAGGTCATGGCA ACACGGAACAAGATCTACTTTGTGATGGAGTATGTGAAAGGTGGTGAGCTATTTGAAAAG GTTGCAAAGCGTGGAAAGCTTACAGAGGTTGTTGCACATAAGTACTTCCAGCAACTCATT AGTGCAGTGGATTACTGCCACAGTCGAGGTGTGTATCACCGGGACTTGAAGCCTGAAAAC CTGCTGTTGGATGAGAATGAGAACCTGAAAGTCTCAGACTTTGGACTGAGTGCGCTTTCA GAGTCGAAGAGGCAAGATGGCTTACTCCATACCACCTGTGGAACACCTGCATATGTAGCT CCAGAGGTGATCAGCAAGATAGGATATGATGGTGCAAAGTCAGATATTTGGTCTTGTGGT GTTATCCTGTTTGTTCTTGTTGCTGGTTACCTTCCTTTCCAGGGCCCAAACTTGATGGAA ATGTATCGGAAGATACAACATGGTGAATTCAGGTGCCCCGGTTGGTTTTCACGCAAACTT CAGAAGTTGTTGTACAAGATCATGGACCCCAACCCAAGCACAAGGATTTCAATCCAGAAG ATAAAGGAGTCTACCTGGTTCCGGAAAGGTCCTGAGGAGAATCGTATTTTGAAGGAAAGA ACTTTGAATGAAAACACCACCAAAAATGTTGCTCTGGTGCTTGGTGTGAGACGCAAGAAA AATGCTCATGAAGATGTGAAGCCCATGTCAGTGACAAACTTAAATGCCTTTGAAATTATC TCTTTCTCCAAGGGGTTTGATCTCTCTGGCATGTTCATTGTAAAGGAATGGAGAAATGAG GCAAGGTTCACTTCAGATAAATCTGCCTCAACCATAATCTCAAAGCTAGAAGATGTAGCA AAGGCGCTAAATCTCAGGGTAAGGAAGAAAGACAATGGTGTAGTGAAGATGCAAGGGAGG AAGGAGGGAAGGAATGGTGTTCTTCAGTTTGACATAGAGATATTTGAGGTTACCACTTCC TATCATATCATCGAGATGAAACAAACAAGTGGCGATTCATTGGAGTACCGACAGCTACTG GAGGAGGGCATCCGGCCAGCTCTGAAGGACATTGTCTTGGCCTGGCATGGAGATGAATAG
Protein |
439 aa |
>Os12t0113500-01 Similar to CBL-interacting protein kinase 14. MESRGKILMERYELGRLLGKGTFGKVHYARNLESNQSVAIKMMDKQQVLKVGLSEQIRRE ITTMRLVAHKNIVQLHEVMATRNKIYFVMEYVKGGELFEKVAKRGKLTEVVAHKYFQQLI SAVDYCHSRGVYHRDLKPENLLLDENENLKVSDFGLSALSESKRQDGLLHTTCGTPAYVA PEVISKIGYDGAKSDIWSCGVILFVLVAGYLPFQGPNLMEMYRKIQHGEFRCPGWFSRKL QKLLYKIMDPNPSTRISIQKIKESTWFRKGPEENRILKERTLNENTTKNVALVLGVRRKK NAHEDVKPMSVTNLNAFEIISFSKGFDLSGMFIVKEWRNEARFTSDKSASTIISKLEDVA KALNLRVRKKDNGVVKMQGRKEGRNGVLQFDIEIFEVTTSYHIIEMKQTSGDSLEYRQLL EEGIRPALKDIVLAWHGDE*
5'UTR
chr12:681986..682143 (- strand) : 158 bp
chr12:680644..680948 (- strand) : 305 bp
CDS
chr12:679324..680643 (- strand) : 1320 bp
3'UTR
chr12:679079..679323 (- strand) : 245 bp
FASTA
>Os12t0113500-01 class=Sequence position=chr12:679079..682143 (- strand) GCATCCACTC CACATACTAC CACTCAAAAA CTCTCTCTCT CTACCCAAAC AGGTTTTGAG AAAGAAGTGG AGGACAGATC CAAAAAGTTC ACCTTTTGAT TATCCAAACA AGTTTGGAGT TTGTTACCTG AATCTCCTCT TCTTCCTGTC ACCGGAAGGT ATGCAGTTCC TCTCTCCATA TCATCTTCTA GCGTTTCTTT CTACAGATTC TTGATTGCTC GCTTTTTTCC ATTATTCTCT TTTGCTCCAA CGTAGGGGTA GGGCCACATC AGTTGGACAA GTAGAAATTG ATGGCACATC AATTGAGTAG ATGCGGAAAT TTCTGGTTTT TAGTTAAAGT TTAGACCATG CCGATGCCAA AGTGCTGCCG TTTAATCGAA TACAACGATA TATACTCTTG CAATGGCATG TGTCATGAGG TGTTTGGGTT TGGCGAGGCT CAGTTTTCAT TGAATTTCCC CTCCTTCCCA TGTGGCCGTA TCAAGCCTAA TCTTTGAAAA ATATTCACTT CATGTGGATG CGGAATCACT AGATGCAGCT TGACTCCATG CAAATCCTAA CTCCTGCCAT GTGCCCATGT GCCTGTCCCT TATCCTGATT TGCATCTGAA TTCATTTGCT CAGTAATTTG CTTGTTCAGT GCCTAATCCG ATAGACGTCC AAACAAAGTT TTAATTAGGA GCAGAAGATC CAGCAATGTT ATTTTTTCTG AATTTGTAAT GTCTTGGTTT CTGAATTCGT AATTGACTAT TTTTATTAAT CACCTTTCTG AACCTGAACG AAAGATGCAT AATGATTCAC ATCGGTTGCA AATTTACTGA ATATTTCCTC TTATTTCTAG TGTGTTATTC ATAGAGTTCC GAAACTCAAT TTCCCTTTTT TAAAAAAGCT TCTGATTTAC CATTCCAGAT TTCTGATAAG TACTTAGTTA AAGTTCCTTA TTATATTAAT TATCTATATT ATCTATTACA CAACACGTTG AACTCATGTA AGTTCTGATT GATTATAGGG AACACTTATA TTATATAAGT AGTAGGTATA ATTATATAAA AATGCAGTTA GTACTACAAT AAGCTTTCAA AATTCTTCGT AGTGACTTTT GTTTGGTTAA AGTTCTTACA GACTTCCAGA TTATTATACG TACCTTGTTA GCGACATTCA ATTACTGAAT CTGATGCCTG GTTTTGTTTG TGCAGGGAAA TTGATAAAAA AAAAGCAGTG AAAGCCTCAA GGAATGCTGA AAGATGTGCT TGCATAGAAG AAATTTTCCG TGTGAGATAA AGCAGATTGC TGGTTCACTA GTGCTACTGA TCTGCTCAAG TCTTGATGTG AGTGATCAAC TTTCCTGCAC TAATTCTACA CCATTTAGAC TCCGAAACGA CGATGATATA AGAATGTTGT TCTCCATTCA TGATCATGAC CTTGGGGAGG ATGGCTAAAG AATTGCAGTC CATCTGATTG GTGGTCAAAA CATAGTGCTG AGATTTATAT CTTTGTGGGC ATGGAGAGTA GAGGGAAGAT ACTAATGGAG AGGTATGAGT TGGGCAGATT GTTGGGGAAA GGAACATTTG GCAAGGTGCA CTATGCAAGG AATCTGGAGT CAAACCAGAG TGTGGCCATA AAGATGATGG ACAAACAGCA GGTGTTGAAG GTCGGGCTTT CGGAGCAGAT CAGACGTGAG ATCACAACCA TGCGGTTGGT GGCTCATAAG AACATTGTTC AGCTTCATGA GGTCATGGCA ACACGGAACA AGATCTACTT TGTGATGGAG TATGTGAAAG GTGGTGAGCT ATTTGAAAAG GTTGCAAAGC GTGGAAAGCT TACAGAGGTT GTTGCACATA AGTACTTCCA GCAACTCATT AGTGCAGTGG ATTACTGCCA CAGTCGAGGT GTGTATCACC GGGACTTGAA GCCTGAAAAC CTGCTGTTGG ATGAGAATGA GAACCTGAAA GTCTCAGACT TTGGACTGAG TGCGCTTTCA GAGTCGAAGA GGCAAGATGG CTTACTCCAT ACCACCTGTG GAACACCTGC ATATGTAGCT CCAGAGGTGA TCAGCAAGAT AGGATATGAT GGTGCAAAGT CAGATATTTG GTCTTGTGGT GTTATCCTGT TTGTTCTTGT TGCTGGTTAC CTTCCTTTCC AGGGCCCAAA CTTGATGGAA ATGTATCGGA AGATACAACA TGGTGAATTC AGGTGCCCCG GTTGGTTTTC ACGCAAACTT CAGAAGTTGT TGTACAAGAT CATGGACCCC AACCCAAGCA CAAGGATTTC AATCCAGAAG ATAAAGGAGT CTACCTGGTT CCGGAAAGGT CCTGAGGAGA ATCGTATTTT GAAGGAAAGA ACTTTGAATG AAAACACCAC CAAAAATGTT GCTCTGGTGC TTGGTGTGAG ACGCAAGAAA AATGCTCATG AAGATGTGAA GCCCATGTCA GTGACAAACT TAAATGCCTT TGAAATTATC TCTTTCTCCA AGGGGTTTGA TCTCTCTGGC ATGTTCATTG TAAAGGAATG GAGAAATGAG GCAAGGTTCA CTTCAGATAA ATCTGCCTCA ACCATAATCT CAAAGCTAGA AGATGTAGCA AAGGCGCTAA ATCTCAGGGT AAGGAAGAAA GACAATGGTG TAGTGAAGAT GCAAGGGAGG AAGGAGGGAA GGAATGGTGT TCTTCAGTTT GACATAGAGA TATTTGAGGT TACCACTTCC TATCATATCA TCGAGATGAA ACAAACAAGT GGCGATTCAT TGGAGTACCG ACAGCTACTG GAGGAGGGCA TCCGGCCAGC TCTGAAGGAC ATTGTCTTGG CCTGGCATGG AGATGAATAG CAGCAGTCGC AAGAGTAGAT TTTGATGTCT CAAGCATTTA GTTTCCGCTC CTCAAATTCA TTAGGTTTTA GCTCAAATGA ATTTATTTGT CTTGCCTATG TTCTTTTTAG CATCTATGTT TTTGTATCTG GAGAGTTCAT GTTGAGGCAA TCTATGCACA ATTTAGATGG AGTCTGTCGA GAGTAATTTT ATGAGAAGTT GAGCTGCAAT ATAAAAGTTG GCTTTGAGCC TTTCAAGCTT TCTTC
Locus: Os12g0113500
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Locus: Os12g0113500
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