Annotation data on IRGSP build 4 genome sequence

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IRGSP_masked

• The IRGSP genome sequence (build 4 assembly) masked by RepeatMasker with TIGR's repeat data
  [DOWNLOAD] (gz file, 115MB)

Assembly Information

• List of BAC/PAC clones and gap position information
  [DOWNLOAD] (gz file, 0.6MB)

Repeats

• '.out' files produced by RepeatMasker
  [DOWNLOAD] (gz file, 9.9MB)

GFF File

• RAP Annotation (release 2)
  [DOWNLOAD] (gz file, 23.3MB)
  [DOWNLOAD] (GFF file of each chromosome, gz file, 19MB)
  

All sequences

• [DOWNLOAD] (gz file, 77.8MB)

Representative sequences

• [DOWNLOAD] (gz file, 34.8MB)

Predicted sequences

• [DOWNLOAD] (gz file, 14.9MB)

RNA

• [DOWNLOAD] (gz file, 0.3MB)

Table of the Os code and MSU's LOC_Os

• [DOWNLOAD] (gz file, 0.6MB)

Gene family data

• [DOWNLOAD] (gz file, 0.4MB)

RFLP/SSR marker information (by courtesy of Dr. Nagamura)

• [DOWNLOAD] (gz file, 0.4MB)

Pack-MULE sequences without nested transposons (by courtesy of Drs. Jiang and Hanada)

• [DOWNLOAD] (gz file, 0.6MB)